Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0337:0338
Extra
PDB:
ATOM 1 O3' C A 336 24.329 124.929 15.580 1.00 65.31 O
ATOM 2 P U A 337 25.808 124.903 14.945 1.00 67.31 P
ATOM 3 OP1 U A 337 25.891 123.720 14.052 1.00 68.87 O
ATOM 4 OP2 U A 337 26.791 125.057 16.046 1.00 69.09 O
ATOM 5 O5' U A 337 25.876 126.219 14.051 1.00 68.82 O
ATOM 6 C5' U A 337 25.048 126.367 12.883 1.00 70.69 C
ATOM 7 C4' U A 337 25.189 127.760 12.319 1.00 72.83 C
ATOM 8 O4' U A 337 24.668 128.732 13.270 1.00 73.60 O
ATOM 9 C3' U A 337 26.617 128.224 12.080 1.00 74.07 C
ATOM 10 O3' U A 337 27.171 127.732 10.870 1.00 74.04 O
ATOM 11 C2' U A 337 26.462 129.736 12.077 1.00 74.64 C
ATOM 12 O2' U A 337 25.930 130.225 10.863 1.00 75.89 O
ATOM 13 C1' U A 337 25.440 129.925 13.200 1.00 74.76 C
ATOM 14 N1 U A 337 26.093 130.152 14.501 1.00 74.83 N
ATOM 15 C2 U A 337 26.523 131.441 14.790 1.00 75.48 C
ATOM 16 O2 U A 337 26.378 132.380 14.025 1.00 75.90 O
ATOM 17 N3 U A 337 27.130 131.591 16.012 1.00 75.73 N
ATOM 18 C4 U A 337 27.348 130.612 16.957 1.00 75.43 C
ATOM 19 O4 U A 337 27.904 130.909 18.017 1.00 74.86 O
ATOM 20 C5 U A 337 26.883 129.307 16.585 1.00 75.14 C
ATOM 21 C6 U A 337 26.285 129.127 15.403 1.00 74.19 C
ATOM 22 P C A 338 28.765 127.599 10.729 1.00 75.79 P
ATOM 23 OP1 C A 338 29.048 126.998 9.400 1.00 75.76 O
ATOM 24 OP2 C A 338 29.300 126.950 11.953 1.00 75.39 O
ATOM 25 O5' C A 338 29.267 129.111 10.718 1.00 76.18 O
TER
ATOM 1 O3' U B 337 27.171 127.732 10.870 1.00 74.04 O
ATOM 2 P C B 338 28.765 127.599 10.729 1.00 75.79 P
ATOM 3 OP1 C B 338 29.048 126.998 9.400 1.00 75.76 O
ATOM 4 OP2 C B 338 29.300 126.950 11.953 1.00 75.39 O
ATOM 5 O5' C B 338 29.267 129.111 10.718 1.00 76.18 O
ATOM 6 C5' C B 338 28.773 130.045 9.738 1.00 75.61 C
ATOM 7 C4' C B 338 29.237 131.451 10.057 1.00 75.41 C
ATOM 8 O4' C B 338 28.673 131.890 11.325 1.00 74.44 O
ATOM 9 C3' C B 338 30.732 131.664 10.251 1.00 75.63 C
ATOM 10 O3' C B 338 31.459 131.726 9.027 1.00 77.15 O
ATOM 11 C2' C B 338 30.755 132.993 10.992 1.00 74.96 C
ATOM 12 O2' C B 338 30.535 134.106 10.148 1.00 73.06 O
ATOM 13 C1' C B 338 29.559 132.826 11.933 1.00 74.39 C
ATOM 14 N1 C B 338 29.987 132.324 13.257 1.00 74.12 N
ATOM 15 C2 C B 338 30.526 133.240 14.181 1.00 73.52 C
ATOM 16 O2 C B 338 30.600 134.437 13.872 1.00 73.22 O
ATOM 17 N3 C B 338 30.953 132.796 15.380 1.00 73.34 N
ATOM 18 C4 C B 338 30.863 131.501 15.682 1.00 73.61 C
ATOM 19 N4 C B 338 31.313 131.109 16.874 1.00 73.89 N
ATOM 20 C5 C B 338 30.311 130.549 14.773 1.00 73.47 C
ATOM 21 C6 C B 338 29.886 131.000 13.585 1.00 73.88 C
ATOM 22 P G B 339 33.040 131.417 9.020 1.00 78.31 P
ATOM 23 OP1 G B 339 33.461 131.337 7.594 1.00 80.10 O
ATOM 24 OP2 G B 339 33.312 130.274 9.926 1.00 78.97 O
ATOM 25 O5' G B 339 33.701 132.718 9.666 1.00 77.92 O
TER
ATOM 2 P U A 337 25.808 124.903 14.945 1.00 67.31 P
ATOM 3 OP1 U A 337 25.891 123.720 14.052 1.00 68.87 O
ATOM 4 OP2 U A 337 26.791 125.057 16.046 1.00 69.09 O
ATOM 5 O5' U A 337 25.876 126.219 14.051 1.00 68.82 O
ATOM 6 C5' U A 337 25.048 126.367 12.883 1.00 70.69 C
ATOM 7 C4' U A 337 25.189 127.760 12.319 1.00 72.83 C
ATOM 8 O4' U A 337 24.668 128.732 13.270 1.00 73.60 O
ATOM 9 C3' U A 337 26.617 128.224 12.080 1.00 74.07 C
ATOM 10 O3' U A 337 27.171 127.732 10.870 1.00 74.04 O
ATOM 11 C2' U A 337 26.462 129.736 12.077 1.00 74.64 C
ATOM 12 O2' U A 337 25.930 130.225 10.863 1.00 75.89 O
ATOM 13 C1' U A 337 25.440 129.925 13.200 1.00 74.76 C
ATOM 14 N1 U A 337 26.093 130.152 14.501 1.00 74.83 N
ATOM 15 C2 U A 337 26.523 131.441 14.790 1.00 75.48 C
ATOM 16 O2 U A 337 26.378 132.380 14.025 1.00 75.90 O
ATOM 17 N3 U A 337 27.130 131.591 16.012 1.00 75.73 N
ATOM 18 C4 U A 337 27.348 130.612 16.957 1.00 75.43 C
ATOM 19 O4 U A 337 27.904 130.909 18.017 1.00 74.86 O
ATOM 20 C5 U A 337 26.883 129.307 16.585 1.00 75.14 C
ATOM 21 C6 U A 337 26.285 129.127 15.403 1.00 74.19 C
ATOM 22 P C A 338 28.765 127.599 10.729 1.00 75.79 P
ATOM 23 OP1 C A 338 29.048 126.998 9.400 1.00 75.76 O
ATOM 24 OP2 C A 338 29.300 126.950 11.953 1.00 75.39 O
ATOM 25 O5' C A 338 29.267 129.111 10.718 1.00 76.18 O
TER
ATOM 1 O3' U B 337 27.171 127.732 10.870 1.00 74.04 O
ATOM 2 P C B 338 28.765 127.599 10.729 1.00 75.79 P
ATOM 3 OP1 C B 338 29.048 126.998 9.400 1.00 75.76 O
ATOM 4 OP2 C B 338 29.300 126.950 11.953 1.00 75.39 O
ATOM 5 O5' C B 338 29.267 129.111 10.718 1.00 76.18 O
ATOM 6 C5' C B 338 28.773 130.045 9.738 1.00 75.61 C
ATOM 7 C4' C B 338 29.237 131.451 10.057 1.00 75.41 C
ATOM 8 O4' C B 338 28.673 131.890 11.325 1.00 74.44 O
ATOM 9 C3' C B 338 30.732 131.664 10.251 1.00 75.63 C
ATOM 10 O3' C B 338 31.459 131.726 9.027 1.00 77.15 O
ATOM 11 C2' C B 338 30.755 132.993 10.992 1.00 74.96 C
ATOM 12 O2' C B 338 30.535 134.106 10.148 1.00 73.06 O
ATOM 13 C1' C B 338 29.559 132.826 11.933 1.00 74.39 C
ATOM 14 N1 C B 338 29.987 132.324 13.257 1.00 74.12 N
ATOM 15 C2 C B 338 30.526 133.240 14.181 1.00 73.52 C
ATOM 16 O2 C B 338 30.600 134.437 13.872 1.00 73.22 O
ATOM 17 N3 C B 338 30.953 132.796 15.380 1.00 73.34 N
ATOM 18 C4 C B 338 30.863 131.501 15.682 1.00 73.61 C
ATOM 19 N4 C B 338 31.313 131.109 16.874 1.00 73.89 N
ATOM 20 C5 C B 338 30.311 130.549 14.773 1.00 73.47 C
ATOM 21 C6 C B 338 29.886 131.000 13.585 1.00 73.88 C
ATOM 22 P G B 339 33.040 131.417 9.020 1.00 78.31 P
ATOM 23 OP1 G B 339 33.461 131.337 7.594 1.00 80.10 O
ATOM 24 OP2 G B 339 33.312 130.274 9.926 1.00 78.97 O
ATOM 25 O5' G B 339 33.701 132.718 9.666 1.00 77.92 O
TER
Atoms:
C4: (27.348,130.612,16.957)
N3: (27.130,131.591,16.012)
OP1: (25.891,123.720,14.052)
OP2: (26.791,125.057,16.046)
C2: (26.523,131.441,14.790)
C1': (25.440,129.925,13.200)
C3': (26.617,128.224,12.080)
O5': (25.876,126.219,14.051)
O4': (24.668,128.732,13.270)
C5': (25.048,126.367,12.883)
P: (25.808,124.903,14.945)
C4': (25.189,127.760,12.319)
C2': (26.462,129.736,12.077)
O2': (25.930,130.225,10.863)
N1: (26.093,130.152,14.501)
O4: (27.904,130.909,18.017)
O2: (26.378,132.380,14.025)
C6: (26.285,129.127,15.403)
C5: (26.883,129.307,16.585)
O3': (27.171,127.732,10.870)
N3: (27.130,131.591,16.012)
OP1: (25.891,123.720,14.052)
OP2: (26.791,125.057,16.046)
C2: (26.523,131.441,14.790)
C1': (25.440,129.925,13.200)
C3': (26.617,128.224,12.080)
O5': (25.876,126.219,14.051)
O4': (24.668,128.732,13.270)
C5': (25.048,126.367,12.883)
P: (25.808,124.903,14.945)
C4': (25.189,127.760,12.319)
C2': (26.462,129.736,12.077)
O2': (25.930,130.225,10.863)
N1: (26.093,130.152,14.501)
O4: (27.904,130.909,18.017)
O2: (26.378,132.380,14.025)
C6: (26.285,129.127,15.403)
C5: (26.883,129.307,16.585)
O3': (27.171,127.732,10.870)
C2: (30.526,133.240,14.181)
OP1: (29.048,126.998,9.400)
OP2: (29.300,126.950,11.953)
C4: (30.863,131.501,15.682)
O5': (29.267,129.111,10.718)
C3': (30.732,131.664,10.251)
C1': (29.559,132.826,11.933)
O4': (28.673,131.890,11.325)
C5': (28.773,130.045,9.738)
P: (28.765,127.599,10.729)
O2: (30.600,134.437,13.872)
C4': (29.237,131.451,10.057)
C2': (30.755,132.993,10.992)
O2': (30.535,134.106,10.148)
N1: (29.987,132.324,13.257)
N3: (30.953,132.796,15.380)
N4: (31.313,131.109,16.874)
C6: (29.886,131.000,13.585)
C5: (30.311,130.549,14.773)
O3': (31.459,131.726,9.027)
OP1: (29.048,126.998,9.400)
OP2: (29.300,126.950,11.953)
C4: (30.863,131.501,15.682)
O5': (29.267,129.111,10.718)
C3': (30.732,131.664,10.251)
C1': (29.559,132.826,11.933)
O4': (28.673,131.890,11.325)
C5': (28.773,130.045,9.738)
P: (28.765,127.599,10.729)
O2: (30.600,134.437,13.872)
C4': (29.237,131.451,10.057)
C2': (30.755,132.993,10.992)
O2': (30.535,134.106,10.148)
N1: (29.987,132.324,13.257)
N3: (30.953,132.796,15.380)
N4: (31.313,131.109,16.874)
C6: (29.886,131.000,13.585)
C5: (30.311,130.549,14.773)
O3': (31.459,131.726,9.027)
Image (generated by PyMOL):