Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0125:0127
Extra
PDB:
ATOM 1 O3' C A 124 88.882 133.570 8.982 1.00 47.45 O
ATOM 2 P U A 125 90.310 133.902 8.321 1.00 51.16 P
ATOM 3 OP1 U A 125 90.206 133.416 6.925 1.00 51.01 O
ATOM 4 OP2 U A 125 91.407 133.385 9.200 1.00 49.46 O
ATOM 5 O5' U A 125 90.378 135.501 8.293 1.00 52.92 O
ATOM 6 C5' U A 125 89.468 136.275 7.471 1.00 56.70 C
ATOM 7 C4' U A 125 89.487 137.738 7.879 1.00 59.06 C
ATOM 8 O4' U A 125 89.202 137.838 9.300 1.00 58.96 O
ATOM 9 C3' U A 125 90.799 138.496 7.707 1.00 60.83 C
ATOM 10 O3' U A 125 90.937 138.974 6.363 1.00 65.28 O
ATOM 11 C2' U A 125 90.639 139.635 8.713 1.00 59.60 C
ATOM 12 O2' U A 125 89.788 140.666 8.258 1.00 61.09 O
ATOM 13 C1' U A 125 89.922 138.924 9.860 1.00 56.93 C
ATOM 14 N1 U A 125 90.840 138.400 10.881 1.00 54.65 N
ATOM 15 C2 U A 125 91.183 139.239 11.926 1.00 54.00 C
ATOM 16 O2 U A 125 90.765 140.381 12.022 1.00 54.43 O
ATOM 17 N3 U A 125 92.035 138.693 12.855 1.00 52.52 N
ATOM 18 C4 U A 125 92.574 137.423 12.844 1.00 52.83 C
ATOM 19 O4 U A 125 93.332 137.075 13.756 1.00 53.49 O
ATOM 20 C5 U A 125 92.178 136.618 11.728 1.00 53.80 C
ATOM 21 C6 U A 125 91.345 137.120 10.809 1.00 54.42 C
ATOM 22 P U A 126 92.378 139.450 5.804 1.00 68.44 P
ATOM 23 OP1 U A 126 92.313 139.282 4.335 1.00 68.92 O
ATOM 24 OP2 U A 126 93.438 138.742 6.570 1.00 68.02 O
ATOM 25 O5' U A 126 92.438 141.019 6.131 1.00 71.03 O
TER
ATOM 1 O3' U B 126 93.281 145.052 6.451 1.00 77.16 O
ATOM 2 P C B 127 94.665 144.669 7.174 1.00 77.14 P
ATOM 3 OP1 C B 127 95.440 145.933 7.297 1.00 75.46 O
ATOM 4 OP2 C B 127 95.261 143.511 6.449 1.00 75.86 O
ATOM 5 O5' C B 127 94.241 144.194 8.637 1.00 75.72 O
ATOM 6 C5' C B 127 93.838 145.143 9.648 1.00 72.75 C
ATOM 7 C4' C B 127 94.359 144.718 11.004 1.00 71.45 C
ATOM 8 O4' C B 127 93.896 143.363 11.262 1.00 70.41 O
ATOM 9 C3' C B 127 95.883 144.686 11.173 1.00 71.17 C
ATOM 10 O3' C B 127 96.249 144.966 12.527 1.00 71.04 O
ATOM 11 C2' C B 127 96.211 143.223 10.900 1.00 71.84 C
ATOM 12 O2' C B 127 97.412 142.781 11.512 1.00 72.39 O
ATOM 13 C1' C B 127 95.005 142.528 11.527 1.00 70.88 C
ATOM 14 N1 C B 127 94.750 141.203 10.948 1.00 69.56 N
ATOM 15 C2 C B 127 95.136 140.059 11.674 1.00 69.76 C
ATOM 16 O2 C B 127 95.643 140.197 12.805 1.00 68.60 O
ATOM 17 N3 C B 127 94.943 138.835 11.126 1.00 70.35 N
ATOM 18 C4 C B 127 94.380 138.727 9.915 1.00 71.07 C
ATOM 19 N4 C B 127 94.215 137.498 9.403 1.00 70.84 N
ATOM 20 C5 C B 127 93.962 139.874 9.171 1.00 70.71 C
ATOM 21 C6 C B 127 94.163 141.078 9.720 1.00 69.42 C
ATOM 22 P G B 128 96.421 146.489 13.018 1.00 72.33 P
ATOM 23 OP1 G B 128 97.202 147.244 11.994 1.00 71.05 O
ATOM 24 OP2 G B 128 96.896 146.453 14.436 1.00 70.38 O
ATOM 25 O5' G B 128 94.929 147.040 12.989 1.00 67.69 O
TER
ATOM 2 P U A 125 90.310 133.902 8.321 1.00 51.16 P
ATOM 3 OP1 U A 125 90.206 133.416 6.925 1.00 51.01 O
ATOM 4 OP2 U A 125 91.407 133.385 9.200 1.00 49.46 O
ATOM 5 O5' U A 125 90.378 135.501 8.293 1.00 52.92 O
ATOM 6 C5' U A 125 89.468 136.275 7.471 1.00 56.70 C
ATOM 7 C4' U A 125 89.487 137.738 7.879 1.00 59.06 C
ATOM 8 O4' U A 125 89.202 137.838 9.300 1.00 58.96 O
ATOM 9 C3' U A 125 90.799 138.496 7.707 1.00 60.83 C
ATOM 10 O3' U A 125 90.937 138.974 6.363 1.00 65.28 O
ATOM 11 C2' U A 125 90.639 139.635 8.713 1.00 59.60 C
ATOM 12 O2' U A 125 89.788 140.666 8.258 1.00 61.09 O
ATOM 13 C1' U A 125 89.922 138.924 9.860 1.00 56.93 C
ATOM 14 N1 U A 125 90.840 138.400 10.881 1.00 54.65 N
ATOM 15 C2 U A 125 91.183 139.239 11.926 1.00 54.00 C
ATOM 16 O2 U A 125 90.765 140.381 12.022 1.00 54.43 O
ATOM 17 N3 U A 125 92.035 138.693 12.855 1.00 52.52 N
ATOM 18 C4 U A 125 92.574 137.423 12.844 1.00 52.83 C
ATOM 19 O4 U A 125 93.332 137.075 13.756 1.00 53.49 O
ATOM 20 C5 U A 125 92.178 136.618 11.728 1.00 53.80 C
ATOM 21 C6 U A 125 91.345 137.120 10.809 1.00 54.42 C
ATOM 22 P U A 126 92.378 139.450 5.804 1.00 68.44 P
ATOM 23 OP1 U A 126 92.313 139.282 4.335 1.00 68.92 O
ATOM 24 OP2 U A 126 93.438 138.742 6.570 1.00 68.02 O
ATOM 25 O5' U A 126 92.438 141.019 6.131 1.00 71.03 O
TER
ATOM 1 O3' U B 126 93.281 145.052 6.451 1.00 77.16 O
ATOM 2 P C B 127 94.665 144.669 7.174 1.00 77.14 P
ATOM 3 OP1 C B 127 95.440 145.933 7.297 1.00 75.46 O
ATOM 4 OP2 C B 127 95.261 143.511 6.449 1.00 75.86 O
ATOM 5 O5' C B 127 94.241 144.194 8.637 1.00 75.72 O
ATOM 6 C5' C B 127 93.838 145.143 9.648 1.00 72.75 C
ATOM 7 C4' C B 127 94.359 144.718 11.004 1.00 71.45 C
ATOM 8 O4' C B 127 93.896 143.363 11.262 1.00 70.41 O
ATOM 9 C3' C B 127 95.883 144.686 11.173 1.00 71.17 C
ATOM 10 O3' C B 127 96.249 144.966 12.527 1.00 71.04 O
ATOM 11 C2' C B 127 96.211 143.223 10.900 1.00 71.84 C
ATOM 12 O2' C B 127 97.412 142.781 11.512 1.00 72.39 O
ATOM 13 C1' C B 127 95.005 142.528 11.527 1.00 70.88 C
ATOM 14 N1 C B 127 94.750 141.203 10.948 1.00 69.56 N
ATOM 15 C2 C B 127 95.136 140.059 11.674 1.00 69.76 C
ATOM 16 O2 C B 127 95.643 140.197 12.805 1.00 68.60 O
ATOM 17 N3 C B 127 94.943 138.835 11.126 1.00 70.35 N
ATOM 18 C4 C B 127 94.380 138.727 9.915 1.00 71.07 C
ATOM 19 N4 C B 127 94.215 137.498 9.403 1.00 70.84 N
ATOM 20 C5 C B 127 93.962 139.874 9.171 1.00 70.71 C
ATOM 21 C6 C B 127 94.163 141.078 9.720 1.00 69.42 C
ATOM 22 P G B 128 96.421 146.489 13.018 1.00 72.33 P
ATOM 23 OP1 G B 128 97.202 147.244 11.994 1.00 71.05 O
ATOM 24 OP2 G B 128 96.896 146.453 14.436 1.00 70.38 O
ATOM 25 O5' G B 128 94.929 147.040 12.989 1.00 67.69 O
TER
Atoms:
C4: (92.574,137.423,12.844)
N3: (92.035,138.693,12.855)
OP1: (90.206,133.416,6.925)
OP2: (91.407,133.385,9.200)
C2: (91.183,139.239,11.926)
C1': (89.922,138.924,9.860)
C3': (90.799,138.496,7.707)
O5': (90.378,135.501,8.293)
O4': (89.202,137.838,9.300)
C5': (89.468,136.275,7.471)
P: (90.310,133.902,8.321)
C4': (89.487,137.738,7.879)
C2': (90.639,139.635,8.713)
O2': (89.788,140.666,8.258)
N1: (90.840,138.400,10.881)
O4: (93.332,137.075,13.756)
O2: (90.765,140.381,12.022)
C6: (91.345,137.120,10.809)
C5: (92.178,136.618,11.728)
O3': (90.937,138.974,6.363)
N3: (92.035,138.693,12.855)
OP1: (90.206,133.416,6.925)
OP2: (91.407,133.385,9.200)
C2: (91.183,139.239,11.926)
C1': (89.922,138.924,9.860)
C3': (90.799,138.496,7.707)
O5': (90.378,135.501,8.293)
O4': (89.202,137.838,9.300)
C5': (89.468,136.275,7.471)
P: (90.310,133.902,8.321)
C4': (89.487,137.738,7.879)
C2': (90.639,139.635,8.713)
O2': (89.788,140.666,8.258)
N1: (90.840,138.400,10.881)
O4: (93.332,137.075,13.756)
O2: (90.765,140.381,12.022)
C6: (91.345,137.120,10.809)
C5: (92.178,136.618,11.728)
O3': (90.937,138.974,6.363)
C2: (95.136,140.059,11.674)
OP1: (95.440,145.933,7.297)
OP2: (95.261,143.511,6.449)
C4: (94.380,138.727,9.915)
O5': (94.241,144.194,8.637)
C3': (95.883,144.686,11.173)
C1': (95.005,142.528,11.527)
O4': (93.896,143.363,11.262)
C5': (93.838,145.143,9.648)
P: (94.665,144.669,7.174)
O2: (95.643,140.197,12.805)
C4': (94.359,144.718,11.004)
C2': (96.211,143.223,10.900)
O2': (97.412,142.781,11.512)
N1: (94.750,141.203,10.948)
N3: (94.943,138.835,11.126)
N4: (94.215,137.498,9.403)
C6: (94.163,141.078,9.720)
C5: (93.962,139.874,9.171)
O3': (96.249,144.966,12.527)
OP1: (95.440,145.933,7.297)
OP2: (95.261,143.511,6.449)
C4: (94.380,138.727,9.915)
O5': (94.241,144.194,8.637)
C3': (95.883,144.686,11.173)
C1': (95.005,142.528,11.527)
O4': (93.896,143.363,11.262)
C5': (93.838,145.143,9.648)
P: (94.665,144.669,7.174)
O2: (95.643,140.197,12.805)
C4': (94.359,144.718,11.004)
C2': (96.211,143.223,10.900)
O2': (97.412,142.781,11.512)
N1: (94.750,141.203,10.948)
N3: (94.943,138.835,11.126)
N4: (94.215,137.498,9.403)
C6: (94.163,141.078,9.720)
C5: (93.962,139.874,9.171)
O3': (96.249,144.966,12.527)
Image (generated by PyMOL):