Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0919:0920
Extra
PDB:
ATOM 1 O3' C A 918 35.946 89.007 79.500 1.00 40.28 O
ATOM 2 P U A 919 34.932 88.179 78.584 1.00 41.01 P
ATOM 3 OP1 U A 919 33.614 88.311 79.252 1.00 41.93 O
ATOM 4 OP2 U A 919 35.487 86.823 78.302 1.00 36.53 O
ATOM 5 O5' U A 919 34.915 89.010 77.229 1.00 38.78 O
ATOM 6 C5' U A 919 34.422 90.362 77.199 1.00 37.97 C
ATOM 7 C4' U A 919 34.591 90.941 75.817 1.00 37.74 C
ATOM 8 O4' U A 919 35.999 90.920 75.462 1.00 37.14 O
ATOM 9 C3' U A 919 33.931 90.144 74.708 1.00 37.49 C
ATOM 10 O3' U A 919 32.543 90.450 74.616 1.00 38.40 O
ATOM 11 C2' U A 919 34.737 90.561 73.484 1.00 36.08 C
ATOM 12 O2' U A 919 34.367 91.826 72.979 1.00 35.92 O
ATOM 13 C1' U A 919 36.140 90.669 74.079 1.00 34.13 C
ATOM 14 N1 U A 919 36.942 89.456 73.911 1.00 32.59 N
ATOM 15 C2 U A 919 37.602 89.293 72.714 1.00 33.36 C
ATOM 16 O2 U A 919 37.539 90.107 71.809 1.00 33.90 O
ATOM 17 N3 U A 919 38.340 88.142 72.608 1.00 32.63 N
ATOM 18 C4 U A 919 38.484 87.160 73.557 1.00 35.44 C
ATOM 19 O4 U A 919 39.149 86.156 73.294 1.00 37.30 O
ATOM 20 C5 U A 919 37.772 87.403 74.776 1.00 36.87 C
ATOM 21 C6 U A 919 37.039 88.516 74.904 1.00 35.21 C
ATOM 22 P C A 920 31.553 89.450 73.842 1.00 37.97 P
ATOM 23 OP1 C A 920 30.193 90.031 73.927 1.00 34.67 O
ATOM 24 OP2 C A 920 31.808 88.083 74.359 1.00 35.64 O
ATOM 25 O5' C A 920 32.013 89.559 72.318 1.00 37.69 O
TER
ATOM 1 O3' U B 919 32.543 90.450 74.616 1.00 38.40 O
ATOM 2 P C B 920 31.553 89.450 73.842 1.00 37.97 P
ATOM 3 OP1 C B 920 30.193 90.031 73.927 1.00 34.67 O
ATOM 4 OP2 C B 920 31.808 88.083 74.359 1.00 35.64 O
ATOM 5 O5' C B 920 32.013 89.559 72.318 1.00 37.69 O
ATOM 6 C5' C B 920 31.740 90.765 71.559 1.00 39.12 C
ATOM 7 C4' C B 920 32.276 90.650 70.152 1.00 39.79 C
ATOM 8 O4' C B 920 33.718 90.510 70.186 1.00 38.15 O
ATOM 9 C3' C B 920 31.835 89.427 69.368 1.00 41.28 C
ATOM 10 O3' C B 920 30.527 89.564 68.843 1.00 43.45 O
ATOM 11 C2' C B 920 32.906 89.344 68.290 1.00 38.79 C
ATOM 12 O2' C B 920 32.749 90.326 67.284 1.00 41.17 O
ATOM 13 C1' C B 920 34.145 89.691 69.105 1.00 35.53 C
ATOM 14 N1 C B 920 34.784 88.496 69.662 1.00 32.26 N
ATOM 15 C2 C B 920 35.708 87.786 68.877 1.00 31.31 C
ATOM 16 O2 C B 920 35.918 88.150 67.713 1.00 31.58 O
ATOM 17 N3 C B 920 36.339 86.719 69.409 1.00 28.49 N
ATOM 18 C4 C B 920 36.078 86.349 70.662 1.00 28.31 C
ATOM 19 N4 C B 920 36.754 85.325 71.162 1.00 28.83 N
ATOM 20 C5 C B 920 35.119 87.025 71.464 1.00 31.31 C
ATOM 21 C6 C B 920 34.500 88.084 70.931 1.00 30.60 C
ATOM 22 P C B 921 29.640 88.253 68.590 1.00 43.74 P
ATOM 23 OP1 C B 921 28.284 88.770 68.307 1.00 43.44 O
ATOM 24 OP2 C B 921 29.849 87.300 69.704 1.00 44.65 O
ATOM 25 O5' C B 921 30.265 87.605 67.276 1.00 41.62 O
TER
ATOM 2 P U A 919 34.932 88.179 78.584 1.00 41.01 P
ATOM 3 OP1 U A 919 33.614 88.311 79.252 1.00 41.93 O
ATOM 4 OP2 U A 919 35.487 86.823 78.302 1.00 36.53 O
ATOM 5 O5' U A 919 34.915 89.010 77.229 1.00 38.78 O
ATOM 6 C5' U A 919 34.422 90.362 77.199 1.00 37.97 C
ATOM 7 C4' U A 919 34.591 90.941 75.817 1.00 37.74 C
ATOM 8 O4' U A 919 35.999 90.920 75.462 1.00 37.14 O
ATOM 9 C3' U A 919 33.931 90.144 74.708 1.00 37.49 C
ATOM 10 O3' U A 919 32.543 90.450 74.616 1.00 38.40 O
ATOM 11 C2' U A 919 34.737 90.561 73.484 1.00 36.08 C
ATOM 12 O2' U A 919 34.367 91.826 72.979 1.00 35.92 O
ATOM 13 C1' U A 919 36.140 90.669 74.079 1.00 34.13 C
ATOM 14 N1 U A 919 36.942 89.456 73.911 1.00 32.59 N
ATOM 15 C2 U A 919 37.602 89.293 72.714 1.00 33.36 C
ATOM 16 O2 U A 919 37.539 90.107 71.809 1.00 33.90 O
ATOM 17 N3 U A 919 38.340 88.142 72.608 1.00 32.63 N
ATOM 18 C4 U A 919 38.484 87.160 73.557 1.00 35.44 C
ATOM 19 O4 U A 919 39.149 86.156 73.294 1.00 37.30 O
ATOM 20 C5 U A 919 37.772 87.403 74.776 1.00 36.87 C
ATOM 21 C6 U A 919 37.039 88.516 74.904 1.00 35.21 C
ATOM 22 P C A 920 31.553 89.450 73.842 1.00 37.97 P
ATOM 23 OP1 C A 920 30.193 90.031 73.927 1.00 34.67 O
ATOM 24 OP2 C A 920 31.808 88.083 74.359 1.00 35.64 O
ATOM 25 O5' C A 920 32.013 89.559 72.318 1.00 37.69 O
TER
ATOM 1 O3' U B 919 32.543 90.450 74.616 1.00 38.40 O
ATOM 2 P C B 920 31.553 89.450 73.842 1.00 37.97 P
ATOM 3 OP1 C B 920 30.193 90.031 73.927 1.00 34.67 O
ATOM 4 OP2 C B 920 31.808 88.083 74.359 1.00 35.64 O
ATOM 5 O5' C B 920 32.013 89.559 72.318 1.00 37.69 O
ATOM 6 C5' C B 920 31.740 90.765 71.559 1.00 39.12 C
ATOM 7 C4' C B 920 32.276 90.650 70.152 1.00 39.79 C
ATOM 8 O4' C B 920 33.718 90.510 70.186 1.00 38.15 O
ATOM 9 C3' C B 920 31.835 89.427 69.368 1.00 41.28 C
ATOM 10 O3' C B 920 30.527 89.564 68.843 1.00 43.45 O
ATOM 11 C2' C B 920 32.906 89.344 68.290 1.00 38.79 C
ATOM 12 O2' C B 920 32.749 90.326 67.284 1.00 41.17 O
ATOM 13 C1' C B 920 34.145 89.691 69.105 1.00 35.53 C
ATOM 14 N1 C B 920 34.784 88.496 69.662 1.00 32.26 N
ATOM 15 C2 C B 920 35.708 87.786 68.877 1.00 31.31 C
ATOM 16 O2 C B 920 35.918 88.150 67.713 1.00 31.58 O
ATOM 17 N3 C B 920 36.339 86.719 69.409 1.00 28.49 N
ATOM 18 C4 C B 920 36.078 86.349 70.662 1.00 28.31 C
ATOM 19 N4 C B 920 36.754 85.325 71.162 1.00 28.83 N
ATOM 20 C5 C B 920 35.119 87.025 71.464 1.00 31.31 C
ATOM 21 C6 C B 920 34.500 88.084 70.931 1.00 30.60 C
ATOM 22 P C B 921 29.640 88.253 68.590 1.00 43.74 P
ATOM 23 OP1 C B 921 28.284 88.770 68.307 1.00 43.44 O
ATOM 24 OP2 C B 921 29.849 87.300 69.704 1.00 44.65 O
ATOM 25 O5' C B 921 30.265 87.605 67.276 1.00 41.62 O
TER
Atoms:
C4: (38.484,87.160,73.557)
N3: (38.340,88.142,72.608)
OP1: (33.614,88.311,79.252)
OP2: (35.487,86.823,78.302)
C2: (37.602,89.293,72.714)
C1': (36.140,90.669,74.079)
C3': (33.931,90.144,74.708)
O5': (34.915,89.010,77.229)
O4': (35.999,90.920,75.462)
C5': (34.422,90.362,77.199)
P: (34.932,88.179,78.584)
C4': (34.591,90.941,75.817)
C2': (34.737,90.561,73.484)
O2': (34.367,91.826,72.979)
N1: (36.942,89.456,73.911)
O4: (39.149,86.156,73.294)
O2: (37.539,90.107,71.809)
C6: (37.039,88.516,74.904)
C5: (37.772,87.403,74.776)
O3': (32.543,90.450,74.616)
N3: (38.340,88.142,72.608)
OP1: (33.614,88.311,79.252)
OP2: (35.487,86.823,78.302)
C2: (37.602,89.293,72.714)
C1': (36.140,90.669,74.079)
C3': (33.931,90.144,74.708)
O5': (34.915,89.010,77.229)
O4': (35.999,90.920,75.462)
C5': (34.422,90.362,77.199)
P: (34.932,88.179,78.584)
C4': (34.591,90.941,75.817)
C2': (34.737,90.561,73.484)
O2': (34.367,91.826,72.979)
N1: (36.942,89.456,73.911)
O4: (39.149,86.156,73.294)
O2: (37.539,90.107,71.809)
C6: (37.039,88.516,74.904)
C5: (37.772,87.403,74.776)
O3': (32.543,90.450,74.616)
C2: (35.708,87.786,68.877)
OP1: (30.193,90.031,73.927)
OP2: (31.808,88.083,74.359)
C4: (36.078,86.349,70.662)
O5': (32.013,89.559,72.318)
C3': (31.835,89.427,69.368)
C1': (34.145,89.691,69.105)
O4': (33.718,90.510,70.186)
C5': (31.740,90.765,71.559)
P: (31.553,89.450,73.842)
O2: (35.918,88.150,67.713)
C4': (32.276,90.650,70.152)
C2': (32.906,89.344,68.290)
O2': (32.749,90.326,67.284)
N1: (34.784,88.496,69.662)
N3: (36.339,86.719,69.409)
N4: (36.754,85.325,71.162)
C6: (34.500,88.084,70.931)
C5: (35.119,87.025,71.464)
O3': (30.527,89.564,68.843)
OP1: (30.193,90.031,73.927)
OP2: (31.808,88.083,74.359)
C4: (36.078,86.349,70.662)
O5': (32.013,89.559,72.318)
C3': (31.835,89.427,69.368)
C1': (34.145,89.691,69.105)
O4': (33.718,90.510,70.186)
C5': (31.740,90.765,71.559)
P: (31.553,89.450,73.842)
O2: (35.918,88.150,67.713)
C4': (32.276,90.650,70.152)
C2': (32.906,89.344,68.290)
O2': (32.749,90.326,67.284)
N1: (34.784,88.496,69.662)
N3: (36.339,86.719,69.409)
N4: (36.754,85.325,71.162)
C6: (34.500,88.084,70.931)
C5: (35.119,87.025,71.464)
O3': (30.527,89.564,68.843)
Image (generated by PyMOL):