ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1TN2:A11:A12

Extra

PDB:
ATOM 1 O3' C A 10 34.287 -3.446 25.810 1.00 3.00 O
ATOM 2 P U A 11 34.820 -3.445 27.285 1.00 3.00 P
ATOM 3 OP1 U A 11 34.144 -4.533 27.948 1.00 3.00 O
ATOM 4 OP2 U A 11 34.772 -2.126 27.931 1.00 3.00 O
ATOM 5 O5' U A 11 36.308 -3.901 27.159 1.00 3.00 O
ATOM 6 C5' U A 11 36.523 -5.290 27.372 1.00 3.00 C
ATOM 7 C4' U A 11 37.992 -5.593 27.223 1.00 3.00 C
ATOM 8 O4' U A 11 38.414 -5.128 25.934 1.00 3.00 O
ATOM 9 C3' U A 11 38.864 -4.872 28.229 1.00 3.00 C
ATOM 10 O3' U A 11 39.065 -5.610 29.441 1.00 3.90 O
ATOM 11 C2' U A 11 40.168 -4.823 27.478 1.00 3.00 C
ATOM 12 O2' U A 11 40.862 -6.047 27.650 1.00 3.00 O
ATOM 13 C1' U A 11 39.776 -4.685 26.029 1.00 3.00 C
ATOM 14 N1 U A 11 39.967 -3.288 25.649 1.00 15.03 N
ATOM 15 C2 U A 11 41.187 -2.930 25.238 1.00 15.03 C
ATOM 16 O2 U A 11 42.047 -3.811 25.150 1.00 15.03 O
ATOM 17 N3 U A 11 41.497 -1.662 24.906 1.00 15.03 N
ATOM 18 C4 U A 11 40.580 -0.714 24.957 1.00 15.03 C
ATOM 19 O4 U A 11 40.818 0.469 24.642 1.00 15.03 O
ATOM 20 C5 U A 11 39.295 -1.070 25.375 1.00 15.03 C
ATOM 21 C6 U A 11 39.015 -2.398 25.724 1.00 15.03 C
ATOM 22 P C A 12 39.483 -4.888 30.821 1.00 3.90 P
ATOM 23 OP1 C A 12 39.795 -5.907 31.851 1.00 3.90 O
ATOM 24 OP2 C A 12 38.424 -3.920 31.134 1.00 3.90 O
ATOM 25 O5' C A 12 40.779 -4.052 30.480 1.00 3.90 O
TER

ATOM 1 O3' U B 11 39.065 -5.610 29.441 1.00 3.90 O
ATOM 2 P C B 12 39.483 -4.888 30.821 1.00 3.90 P
ATOM 3 OP1 C B 12 39.795 -5.907 31.851 1.00 3.90 O
ATOM 4 OP2 C B 12 38.424 -3.920 31.134 1.00 3.90 O
ATOM 5 O5' C B 12 40.779 -4.052 30.480 1.00 3.90 O
ATOM 6 C5' C B 12 41.933 -4.144 31.290 1.00 3.90 C
ATOM 7 C4' C B 12 43.033 -3.692 30.357 1.00 3.90 C
ATOM 8 O4' C B 12 42.493 -3.089 29.177 1.00 3.90 O
ATOM 9 C3' C B 12 43.926 -2.608 30.881 1.00 3.90 C
ATOM 10 O3' C B 12 44.842 -3.055 31.876 1.00 4.63 O
ATOM 11 C2' C B 12 44.634 -2.213 29.615 1.00 3.90 C
ATOM 12 O2' C B 12 45.707 -3.116 29.323 1.00 3.90 O
ATOM 13 C1' C B 12 43.543 -2.329 28.558 1.00 3.90 C
ATOM 14 N1 C B 12 43.101 -0.989 28.191 1.00 3.66 N
ATOM 15 C2 C B 12 43.923 -0.245 27.479 1.00 3.66 C
ATOM 16 O2 C B 12 44.994 -0.755 27.140 1.00 3.66 O
ATOM 17 N3 C B 12 43.626 1.011 27.115 1.00 3.66 N
ATOM 18 C4 C B 12 42.487 1.530 27.432 1.00 3.66 C
ATOM 19 N4 C B 12 42.152 2.713 26.986 1.00 3.66 N
ATOM 20 C5 C B 12 41.597 0.782 28.178 1.00 3.66 C
ATOM 21 C6 C B 12 41.946 -0.512 28.553 1.00 3.66 C
ATOM 22 P A B 13 45.467 -1.952 32.847 1.00 4.63 P
ATOM 23 OP1 A B 13 46.206 -2.691 33.884 1.00 4.63 O
ATOM 24 OP2 A B 13 44.455 -0.903 33.240 1.00 4.63 O
ATOM 25 O5' A B 13 46.528 -1.239 31.956 1.00 4.63 O
TER

Atoms:
C4: (40.580,-0.714,24.957)
N3: (41.497,-1.662,24.906)
OP1: (34.144,-4.533,27.948)
OP2: (34.772,-2.126,27.931)
C2: (41.187,-2.930,25.238)
C1': (39.776,-4.685,26.029)
C3': (38.864,-4.872,28.229)
O5': (36.308,-3.901,27.159)
O4': (38.414,-5.128,25.934)
C5': (36.523,-5.290,27.372)
P: (34.820,-3.445,27.285)
C4': (37.992,-5.593,27.223)
C2': (40.168,-4.823,27.478)
O2': (40.862,-6.047,27.650)
N1: (39.967,-3.288,25.649)
O4: (40.818,0.469,24.642)
O2: (42.047,-3.811,25.150)
C6: (39.015,-2.398,25.724)
C5: (39.295,-1.070,25.375)
O3': (39.065,-5.610,29.441)
C2: (43.923,-0.245,27.479)
OP1: (39.795,-5.907,31.851)
OP2: (38.424,-3.920,31.134)
C4: (42.487,1.530,27.432)
O5': (40.779,-4.052,30.480)
C3': (43.926,-2.608,30.881)
C1': (43.543,-2.329,28.558)
O4': (42.493,-3.089,29.177)
C5': (41.933,-4.144,31.290)
P: (39.483,-4.888,30.821)
O2: (44.994,-0.755,27.140)
C4': (43.033,-3.692,30.357)
C2': (44.634,-2.213,29.615)
O2': (45.707,-3.116,29.323)
N1: (43.101,-0.989,28.191)
N3: (43.626,1.011,27.115)
N4: (42.152,2.713,26.986)
C6: (41.946,-0.512,28.553)
C5: (41.597,0.782,28.178)
O3': (44.842,-3.055,31.876)
Image (generated by PyMOL):
PyMOL image
show in jmol