Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0285:0286
Extra
PDB:
ATOM 1 O3' G A 284 39.255 119.775 16.977 1.00 75.33 O
ATOM 2 P U A 285 38.598 120.823 18.001 1.00 74.37 P
ATOM 3 OP1 U A 285 37.696 120.094 18.927 1.00 73.78 O
ATOM 4 OP2 U A 285 38.069 121.965 17.206 1.00 72.53 O
ATOM 5 O5' U A 285 39.848 121.340 18.840 1.00 74.49 O
ATOM 6 C5' U A 285 40.653 120.428 19.616 1.00 73.22 C
ATOM 7 C4' U A 285 41.812 121.164 20.248 1.00 72.97 C
ATOM 8 O4' U A 285 42.757 121.566 19.220 1.00 73.10 O
ATOM 9 C3' U A 285 41.447 122.465 20.945 1.00 72.41 C
ATOM 10 O3' U A 285 40.937 122.266 22.255 1.00 72.41 O
ATOM 11 C2' U A 285 42.765 123.222 20.927 1.00 72.53 C
ATOM 12 O2' U A 285 43.660 122.772 21.925 1.00 71.61 O
ATOM 13 C1' U A 285 43.298 122.842 19.543 1.00 73.28 C
ATOM 14 N1 U A 285 42.910 123.795 18.488 1.00 73.55 N
ATOM 15 C2 U A 285 43.751 124.875 18.238 1.00 74.17 C
ATOM 16 O2 U A 285 44.780 125.083 18.865 1.00 73.48 O
ATOM 17 N3 U A 285 43.339 125.705 17.224 1.00 75.02 N
ATOM 18 C4 U A 285 42.203 125.579 16.449 1.00 75.83 C
ATOM 19 O4 U A 285 42.029 126.350 15.499 1.00 76.79 O
ATOM 20 C5 U A 285 41.378 124.455 16.782 1.00 75.24 C
ATOM 21 C6 U A 285 41.750 123.625 17.761 1.00 73.73 C
ATOM 22 P C A 286 39.990 123.384 22.915 1.00 71.96 P
ATOM 23 OP1 C A 286 39.501 122.839 24.205 1.00 73.06 O
ATOM 24 OP2 C A 286 39.011 123.842 21.898 1.00 72.08 O
ATOM 25 O5' C A 286 40.982 124.593 23.216 1.00 71.75 O
TER
ATOM 1 O3' U B 285 40.937 122.266 22.255 1.00 72.41 O
ATOM 2 P C B 286 39.990 123.384 22.915 1.00 71.96 P
ATOM 3 OP1 C B 286 39.501 122.839 24.205 1.00 73.06 O
ATOM 4 OP2 C B 286 39.011 123.842 21.898 1.00 72.08 O
ATOM 5 O5' C B 286 40.982 124.593 23.216 1.00 71.75 O
ATOM 6 C5' C B 286 42.017 124.476 24.211 1.00 71.74 C
ATOM 7 C4' C B 286 42.827 125.747 24.266 1.00 71.77 C
ATOM 8 O4' C B 286 43.515 125.928 22.997 1.00 72.57 O
ATOM 9 C3' C B 286 42.007 127.017 24.411 1.00 72.03 C
ATOM 10 O3' C B 286 41.613 127.289 25.742 1.00 70.51 O
ATOM 11 C2' C B 286 42.944 128.072 23.850 1.00 73.56 C
ATOM 12 O2' C B 286 43.947 128.461 24.770 1.00 73.00 O
ATOM 13 C1' C B 286 43.551 127.314 22.666 1.00 74.30 C
ATOM 14 N1 C B 286 42.779 127.530 21.420 1.00 75.15 N
ATOM 15 C2 C B 286 42.943 128.742 20.717 1.00 75.64 C
ATOM 16 O2 C B 286 43.742 129.596 21.153 1.00 75.36 O
ATOM 17 N3 C B 286 42.224 128.949 19.585 1.00 74.84 N
ATOM 18 C4 C B 286 41.372 128.015 19.152 1.00 73.68 C
ATOM 19 N4 C B 286 40.676 128.270 18.045 1.00 72.66 N
ATOM 20 C5 C B 286 41.194 126.779 19.838 1.00 73.98 C
ATOM 21 C6 C B 286 41.909 126.579 20.954 1.00 74.76 C
ATOM 22 P U B 287 40.335 128.229 26.009 1.00 69.75 P
ATOM 23 OP1 U B 287 40.197 128.373 27.480 1.00 69.78 O
ATOM 24 OP2 U B 287 39.198 127.696 25.214 1.00 68.49 O
ATOM 25 O5' U B 287 40.756 129.646 25.403 1.00 70.26 O
TER
ATOM 2 P U A 285 38.598 120.823 18.001 1.00 74.37 P
ATOM 3 OP1 U A 285 37.696 120.094 18.927 1.00 73.78 O
ATOM 4 OP2 U A 285 38.069 121.965 17.206 1.00 72.53 O
ATOM 5 O5' U A 285 39.848 121.340 18.840 1.00 74.49 O
ATOM 6 C5' U A 285 40.653 120.428 19.616 1.00 73.22 C
ATOM 7 C4' U A 285 41.812 121.164 20.248 1.00 72.97 C
ATOM 8 O4' U A 285 42.757 121.566 19.220 1.00 73.10 O
ATOM 9 C3' U A 285 41.447 122.465 20.945 1.00 72.41 C
ATOM 10 O3' U A 285 40.937 122.266 22.255 1.00 72.41 O
ATOM 11 C2' U A 285 42.765 123.222 20.927 1.00 72.53 C
ATOM 12 O2' U A 285 43.660 122.772 21.925 1.00 71.61 O
ATOM 13 C1' U A 285 43.298 122.842 19.543 1.00 73.28 C
ATOM 14 N1 U A 285 42.910 123.795 18.488 1.00 73.55 N
ATOM 15 C2 U A 285 43.751 124.875 18.238 1.00 74.17 C
ATOM 16 O2 U A 285 44.780 125.083 18.865 1.00 73.48 O
ATOM 17 N3 U A 285 43.339 125.705 17.224 1.00 75.02 N
ATOM 18 C4 U A 285 42.203 125.579 16.449 1.00 75.83 C
ATOM 19 O4 U A 285 42.029 126.350 15.499 1.00 76.79 O
ATOM 20 C5 U A 285 41.378 124.455 16.782 1.00 75.24 C
ATOM 21 C6 U A 285 41.750 123.625 17.761 1.00 73.73 C
ATOM 22 P C A 286 39.990 123.384 22.915 1.00 71.96 P
ATOM 23 OP1 C A 286 39.501 122.839 24.205 1.00 73.06 O
ATOM 24 OP2 C A 286 39.011 123.842 21.898 1.00 72.08 O
ATOM 25 O5' C A 286 40.982 124.593 23.216 1.00 71.75 O
TER
ATOM 1 O3' U B 285 40.937 122.266 22.255 1.00 72.41 O
ATOM 2 P C B 286 39.990 123.384 22.915 1.00 71.96 P
ATOM 3 OP1 C B 286 39.501 122.839 24.205 1.00 73.06 O
ATOM 4 OP2 C B 286 39.011 123.842 21.898 1.00 72.08 O
ATOM 5 O5' C B 286 40.982 124.593 23.216 1.00 71.75 O
ATOM 6 C5' C B 286 42.017 124.476 24.211 1.00 71.74 C
ATOM 7 C4' C B 286 42.827 125.747 24.266 1.00 71.77 C
ATOM 8 O4' C B 286 43.515 125.928 22.997 1.00 72.57 O
ATOM 9 C3' C B 286 42.007 127.017 24.411 1.00 72.03 C
ATOM 10 O3' C B 286 41.613 127.289 25.742 1.00 70.51 O
ATOM 11 C2' C B 286 42.944 128.072 23.850 1.00 73.56 C
ATOM 12 O2' C B 286 43.947 128.461 24.770 1.00 73.00 O
ATOM 13 C1' C B 286 43.551 127.314 22.666 1.00 74.30 C
ATOM 14 N1 C B 286 42.779 127.530 21.420 1.00 75.15 N
ATOM 15 C2 C B 286 42.943 128.742 20.717 1.00 75.64 C
ATOM 16 O2 C B 286 43.742 129.596 21.153 1.00 75.36 O
ATOM 17 N3 C B 286 42.224 128.949 19.585 1.00 74.84 N
ATOM 18 C4 C B 286 41.372 128.015 19.152 1.00 73.68 C
ATOM 19 N4 C B 286 40.676 128.270 18.045 1.00 72.66 N
ATOM 20 C5 C B 286 41.194 126.779 19.838 1.00 73.98 C
ATOM 21 C6 C B 286 41.909 126.579 20.954 1.00 74.76 C
ATOM 22 P U B 287 40.335 128.229 26.009 1.00 69.75 P
ATOM 23 OP1 U B 287 40.197 128.373 27.480 1.00 69.78 O
ATOM 24 OP2 U B 287 39.198 127.696 25.214 1.00 68.49 O
ATOM 25 O5' U B 287 40.756 129.646 25.403 1.00 70.26 O
TER
Atoms:
C4: (42.203,125.579,16.449)
N3: (43.339,125.705,17.224)
OP1: (37.696,120.094,18.927)
OP2: (38.069,121.965,17.206)
C2: (43.751,124.875,18.238)
C1': (43.298,122.842,19.543)
C3': (41.447,122.465,20.945)
O5': (39.848,121.340,18.840)
O4': (42.757,121.566,19.220)
C5': (40.653,120.428,19.616)
P: (38.598,120.823,18.001)
C4': (41.812,121.164,20.248)
C2': (42.765,123.222,20.927)
O2': (43.660,122.772,21.925)
N1: (42.910,123.795,18.488)
O4: (42.029,126.350,15.499)
O2: (44.780,125.083,18.865)
C6: (41.750,123.625,17.761)
C5: (41.378,124.455,16.782)
O3': (40.937,122.266,22.255)
N3: (43.339,125.705,17.224)
OP1: (37.696,120.094,18.927)
OP2: (38.069,121.965,17.206)
C2: (43.751,124.875,18.238)
C1': (43.298,122.842,19.543)
C3': (41.447,122.465,20.945)
O5': (39.848,121.340,18.840)
O4': (42.757,121.566,19.220)
C5': (40.653,120.428,19.616)
P: (38.598,120.823,18.001)
C4': (41.812,121.164,20.248)
C2': (42.765,123.222,20.927)
O2': (43.660,122.772,21.925)
N1: (42.910,123.795,18.488)
O4: (42.029,126.350,15.499)
O2: (44.780,125.083,18.865)
C6: (41.750,123.625,17.761)
C5: (41.378,124.455,16.782)
O3': (40.937,122.266,22.255)
C2: (42.943,128.742,20.717)
OP1: (39.501,122.839,24.205)
OP2: (39.011,123.842,21.898)
C4: (41.372,128.015,19.152)
O5': (40.982,124.593,23.216)
C3': (42.007,127.017,24.411)
C1': (43.551,127.314,22.666)
O4': (43.515,125.928,22.997)
C5': (42.017,124.476,24.211)
P: (39.990,123.384,22.915)
O2: (43.742,129.596,21.153)
C4': (42.827,125.747,24.266)
C2': (42.944,128.072,23.850)
O2': (43.947,128.461,24.770)
N1: (42.779,127.530,21.420)
N3: (42.224,128.949,19.585)
N4: (40.676,128.270,18.045)
C6: (41.909,126.579,20.954)
C5: (41.194,126.779,19.838)
O3': (41.613,127.289,25.742)
OP1: (39.501,122.839,24.205)
OP2: (39.011,123.842,21.898)
C4: (41.372,128.015,19.152)
O5': (40.982,124.593,23.216)
C3': (42.007,127.017,24.411)
C1': (43.551,127.314,22.666)
O4': (43.515,125.928,22.997)
C5': (42.017,124.476,24.211)
P: (39.990,123.384,22.915)
O2: (43.742,129.596,21.153)
C4': (42.827,125.747,24.266)
C2': (42.944,128.072,23.850)
O2': (43.947,128.461,24.770)
N1: (42.779,127.530,21.420)
N3: (42.224,128.949,19.585)
N4: (40.676,128.270,18.045)
C6: (41.909,126.579,20.954)
C5: (41.194,126.779,19.838)
O3': (41.613,127.289,25.742)
Image (generated by PyMOL):