Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X80:X81
Extra
PDB:
ATOM 1 O3' A A 79 23.117 11.511 0.320 1.00 23.20 O
ATOM 2 P U A 80 23.961 12.851 0.597 1.00 25.19 P
ATOM 3 OP1 U A 80 24.828 12.964 -0.612 1.00 23.54 O
ATOM 4 OP2 U A 80 24.563 12.741 1.945 1.00 23.27 O
ATOM 5 O5' U A 80 22.881 14.000 0.599 1.00 22.32 O
ATOM 6 C5' U A 80 22.130 14.420 -0.526 1.00 22.70 C
ATOM 7 C4' U A 80 21.028 15.339 -0.074 1.00 25.27 C
ATOM 8 O4' U A 80 20.095 14.604 0.770 1.00 21.77 O
ATOM 9 C3' U A 80 21.448 16.511 0.812 1.00 19.12 C
ATOM 10 O3' U A 80 22.047 17.589 0.108 1.00 24.42 O
ATOM 11 C2' U A 80 20.125 16.877 1.465 1.00 21.30 C
ATOM 12 O2' U A 80 19.283 17.556 0.537 1.00 22.42 O
ATOM 13 C1' U A 80 19.542 15.488 1.729 1.00 21.68 C
ATOM 14 N1 U A 80 19.860 14.987 3.091 1.00 21.53 N
ATOM 15 C2 U A 80 19.005 15.358 4.116 1.00 22.66 C
ATOM 16 O2 U A 80 18.043 16.082 3.914 1.00 20.16 O
ATOM 17 N3 U A 80 19.335 14.866 5.365 1.00 20.97 N
ATOM 18 C4 U A 80 20.413 14.059 5.667 1.00 20.51 C
ATOM 19 O4 U A 80 20.598 13.685 6.832 1.00 21.22 O
ATOM 20 C5 U A 80 21.250 13.727 4.551 1.00 22.56 C
ATOM 21 C6 U A 80 20.950 14.193 3.333 1.00 19.56 C
ATOM 22 P C A 81 23.190 18.530 0.778 1.00 24.67 P
ATOM 23 OP1 C A 81 23.786 19.336 -0.323 1.00 23.98 O
ATOM 24 OP2 C A 81 24.068 17.658 1.595 1.00 26.18 O
ATOM 25 O5' C A 81 22.336 19.440 1.757 1.00 22.53 O
TER
ATOM 1 O3' U B 80 22.047 17.589 0.108 1.00 24.42 O
ATOM 2 P C B 81 23.190 18.530 0.778 1.00 24.67 P
ATOM 3 OP1 C B 81 23.786 19.336 -0.323 1.00 23.98 O
ATOM 4 OP2 C B 81 24.068 17.658 1.595 1.00 26.18 O
ATOM 5 O5' C B 81 22.336 19.440 1.757 1.00 22.53 O
ATOM 6 C5' C B 81 21.388 20.372 1.262 1.00 24.99 C
ATOM 7 C4' C B 81 20.452 20.840 2.351 1.00 24.04 C
ATOM 8 O4' C B 81 19.748 19.709 2.939 1.00 21.95 O
ATOM 9 C3' C B 81 21.101 21.520 3.548 1.00 21.64 C
ATOM 10 O3' C B 81 21.488 22.866 3.307 1.00 23.72 O
ATOM 11 C2' C B 81 20.025 21.365 4.615 1.00 23.05 C
ATOM 12 O2' C B 81 18.952 22.257 4.375 1.00 22.97 O
ATOM 13 C1' C B 81 19.529 19.949 4.323 1.00 22.05 C
ATOM 14 N1 C B 81 20.273 18.964 5.160 1.00 19.04 N
ATOM 15 C2 C B 81 19.898 18.788 6.499 1.00 21.73 C
ATOM 16 O2 C B 81 18.939 19.439 6.937 1.00 22.55 O
ATOM 17 N3 C B 81 20.572 17.890 7.267 1.00 19.87 N
ATOM 18 C4 C B 81 21.592 17.196 6.773 1.00 19.67 C
ATOM 19 N4 C B 81 22.228 16.334 7.585 1.00 18.49 N
ATOM 20 C5 C B 81 22.009 17.368 5.413 1.00 21.19 C
ATOM 21 C6 C B 81 21.338 18.257 4.668 1.00 19.60 C
ATOM 22 P A B 82 22.758 23.493 4.102 1.00 23.93 P
ATOM 23 OP1 A B 82 23.012 24.798 3.445 1.00 27.12 O
ATOM 24 OP2 A B 82 23.866 22.504 4.207 1.00 26.32 O
ATOM 25 O5' A B 82 22.142 23.714 5.560 1.00 25.49 O
TER
ATOM 2 P U A 80 23.961 12.851 0.597 1.00 25.19 P
ATOM 3 OP1 U A 80 24.828 12.964 -0.612 1.00 23.54 O
ATOM 4 OP2 U A 80 24.563 12.741 1.945 1.00 23.27 O
ATOM 5 O5' U A 80 22.881 14.000 0.599 1.00 22.32 O
ATOM 6 C5' U A 80 22.130 14.420 -0.526 1.00 22.70 C
ATOM 7 C4' U A 80 21.028 15.339 -0.074 1.00 25.27 C
ATOM 8 O4' U A 80 20.095 14.604 0.770 1.00 21.77 O
ATOM 9 C3' U A 80 21.448 16.511 0.812 1.00 19.12 C
ATOM 10 O3' U A 80 22.047 17.589 0.108 1.00 24.42 O
ATOM 11 C2' U A 80 20.125 16.877 1.465 1.00 21.30 C
ATOM 12 O2' U A 80 19.283 17.556 0.537 1.00 22.42 O
ATOM 13 C1' U A 80 19.542 15.488 1.729 1.00 21.68 C
ATOM 14 N1 U A 80 19.860 14.987 3.091 1.00 21.53 N
ATOM 15 C2 U A 80 19.005 15.358 4.116 1.00 22.66 C
ATOM 16 O2 U A 80 18.043 16.082 3.914 1.00 20.16 O
ATOM 17 N3 U A 80 19.335 14.866 5.365 1.00 20.97 N
ATOM 18 C4 U A 80 20.413 14.059 5.667 1.00 20.51 C
ATOM 19 O4 U A 80 20.598 13.685 6.832 1.00 21.22 O
ATOM 20 C5 U A 80 21.250 13.727 4.551 1.00 22.56 C
ATOM 21 C6 U A 80 20.950 14.193 3.333 1.00 19.56 C
ATOM 22 P C A 81 23.190 18.530 0.778 1.00 24.67 P
ATOM 23 OP1 C A 81 23.786 19.336 -0.323 1.00 23.98 O
ATOM 24 OP2 C A 81 24.068 17.658 1.595 1.00 26.18 O
ATOM 25 O5' C A 81 22.336 19.440 1.757 1.00 22.53 O
TER
ATOM 1 O3' U B 80 22.047 17.589 0.108 1.00 24.42 O
ATOM 2 P C B 81 23.190 18.530 0.778 1.00 24.67 P
ATOM 3 OP1 C B 81 23.786 19.336 -0.323 1.00 23.98 O
ATOM 4 OP2 C B 81 24.068 17.658 1.595 1.00 26.18 O
ATOM 5 O5' C B 81 22.336 19.440 1.757 1.00 22.53 O
ATOM 6 C5' C B 81 21.388 20.372 1.262 1.00 24.99 C
ATOM 7 C4' C B 81 20.452 20.840 2.351 1.00 24.04 C
ATOM 8 O4' C B 81 19.748 19.709 2.939 1.00 21.95 O
ATOM 9 C3' C B 81 21.101 21.520 3.548 1.00 21.64 C
ATOM 10 O3' C B 81 21.488 22.866 3.307 1.00 23.72 O
ATOM 11 C2' C B 81 20.025 21.365 4.615 1.00 23.05 C
ATOM 12 O2' C B 81 18.952 22.257 4.375 1.00 22.97 O
ATOM 13 C1' C B 81 19.529 19.949 4.323 1.00 22.05 C
ATOM 14 N1 C B 81 20.273 18.964 5.160 1.00 19.04 N
ATOM 15 C2 C B 81 19.898 18.788 6.499 1.00 21.73 C
ATOM 16 O2 C B 81 18.939 19.439 6.937 1.00 22.55 O
ATOM 17 N3 C B 81 20.572 17.890 7.267 1.00 19.87 N
ATOM 18 C4 C B 81 21.592 17.196 6.773 1.00 19.67 C
ATOM 19 N4 C B 81 22.228 16.334 7.585 1.00 18.49 N
ATOM 20 C5 C B 81 22.009 17.368 5.413 1.00 21.19 C
ATOM 21 C6 C B 81 21.338 18.257 4.668 1.00 19.60 C
ATOM 22 P A B 82 22.758 23.493 4.102 1.00 23.93 P
ATOM 23 OP1 A B 82 23.012 24.798 3.445 1.00 27.12 O
ATOM 24 OP2 A B 82 23.866 22.504 4.207 1.00 26.32 O
ATOM 25 O5' A B 82 22.142 23.714 5.560 1.00 25.49 O
TER
Atoms:
C4: (20.413,14.059,5.667)
N3: (19.335,14.866,5.365)
OP1: (24.828,12.964,-0.612)
OP2: (24.563,12.741,1.945)
C2: (19.005,15.358,4.116)
C1': (19.542,15.488,1.729)
C3': (21.448,16.511,0.812)
O5': (22.881,14.000,0.599)
O4': (20.095,14.604,0.770)
C5': (22.130,14.420,-0.526)
P: (23.961,12.851,0.597)
C4': (21.028,15.339,-0.074)
C2': (20.125,16.877,1.465)
O2': (19.283,17.556,0.537)
N1: (19.860,14.987,3.091)
O4: (20.598,13.685,6.832)
O2: (18.043,16.082,3.914)
C6: (20.950,14.193,3.333)
C5: (21.250,13.727,4.551)
O3': (22.047,17.589,0.108)
N3: (19.335,14.866,5.365)
OP1: (24.828,12.964,-0.612)
OP2: (24.563,12.741,1.945)
C2: (19.005,15.358,4.116)
C1': (19.542,15.488,1.729)
C3': (21.448,16.511,0.812)
O5': (22.881,14.000,0.599)
O4': (20.095,14.604,0.770)
C5': (22.130,14.420,-0.526)
P: (23.961,12.851,0.597)
C4': (21.028,15.339,-0.074)
C2': (20.125,16.877,1.465)
O2': (19.283,17.556,0.537)
N1: (19.860,14.987,3.091)
O4: (20.598,13.685,6.832)
O2: (18.043,16.082,3.914)
C6: (20.950,14.193,3.333)
C5: (21.250,13.727,4.551)
O3': (22.047,17.589,0.108)
C2: (19.898,18.788,6.499)
OP1: (23.786,19.336,-0.323)
OP2: (24.068,17.658,1.595)
C4: (21.592,17.196,6.773)
O5': (22.336,19.440,1.757)
C3': (21.101,21.520,3.548)
C1': (19.529,19.949,4.323)
O4': (19.748,19.709,2.939)
C5': (21.388,20.372,1.262)
P: (23.190,18.530,0.778)
O2: (18.939,19.439,6.937)
C4': (20.452,20.840,2.351)
C2': (20.025,21.365,4.615)
O2': (18.952,22.257,4.375)
N1: (20.273,18.964,5.160)
N3: (20.572,17.890,7.267)
N4: (22.228,16.334,7.585)
C6: (21.338,18.257,4.668)
C5: (22.009,17.368,5.413)
O3': (21.488,22.866,3.307)
OP1: (23.786,19.336,-0.323)
OP2: (24.068,17.658,1.595)
C4: (21.592,17.196,6.773)
O5': (22.336,19.440,1.757)
C3': (21.101,21.520,3.548)
C1': (19.529,19.949,4.323)
O4': (19.748,19.709,2.939)
C5': (21.388,20.372,1.262)
P: (23.190,18.530,0.778)
O2: (18.939,19.439,6.937)
C4': (20.452,20.840,2.351)
C2': (20.025,21.365,4.615)
O2': (18.952,22.257,4.375)
N1: (20.273,18.964,5.160)
N3: (20.572,17.890,7.267)
N4: (22.228,16.334,7.585)
C6: (21.338,18.257,4.668)
C5: (22.009,17.368,5.413)
O3': (21.488,22.866,3.307)
Image (generated by PyMOL):