Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0408:0409
Extra
PDB:
ATOM 1 O3' A A 407 88.763 84.679 31.008 1.00 59.84 O
ATOM 2 P U A 408 88.730 84.660 29.404 1.00 61.51 P
ATOM 3 OP1 U A 408 89.623 85.778 28.986 1.00 61.70 O
ATOM 4 OP2 U A 408 87.311 84.639 28.943 1.00 59.30 O
ATOM 5 O5' U A 408 89.446 83.288 29.031 1.00 58.12 O
ATOM 6 C5' U A 408 90.868 83.140 29.192 1.00 57.86 C
ATOM 7 C4' U A 408 91.299 81.751 28.795 1.00 59.72 C
ATOM 8 O4' U A 408 90.743 80.785 29.727 1.00 58.31 O
ATOM 9 C3' U A 408 90.823 81.262 27.433 1.00 60.76 C
ATOM 10 O3' U A 408 91.620 81.750 26.355 1.00 61.99 O
ATOM 11 C2' U A 408 90.922 79.753 27.594 1.00 60.11 C
ATOM 12 O2' U A 408 92.258 79.304 27.471 1.00 61.12 O
ATOM 13 C1' U A 408 90.441 79.579 29.039 1.00 58.56 C
ATOM 14 N1 U A 408 88.991 79.337 29.141 1.00 57.93 N
ATOM 15 C2 U A 408 88.549 78.021 29.152 1.00 58.34 C
ATOM 16 O2 U A 408 89.299 77.062 29.088 1.00 60.20 O
ATOM 17 N3 U A 408 87.190 77.867 29.240 1.00 56.83 N
ATOM 18 C4 U A 408 86.244 78.860 29.315 1.00 56.43 C
ATOM 19 O4 U A 408 85.050 78.553 29.385 1.00 56.56 O
ATOM 20 C5 U A 408 86.772 80.188 29.304 1.00 55.13 C
ATOM 21 C6 U A 408 88.092 80.377 29.220 1.00 56.27 C
ATOM 22 P C A 409 90.927 82.085 24.937 1.00 65.06 P
ATOM 23 OP1 C A 409 91.859 82.951 24.173 1.00 63.68 O
ATOM 24 OP2 C A 409 89.530 82.539 25.166 1.00 63.47 O
ATOM 25 O5' C A 409 90.845 80.671 24.209 1.00 66.29 O
TER
ATOM 1 O3' U B 408 91.620 81.750 26.355 1.00 61.99 O
ATOM 2 P C B 409 90.927 82.085 24.937 1.00 65.06 P
ATOM 3 OP1 C B 409 91.859 82.951 24.173 1.00 63.68 O
ATOM 4 OP2 C B 409 89.530 82.539 25.166 1.00 63.47 O
ATOM 5 O5' C B 409 90.845 80.671 24.209 1.00 66.29 O
ATOM 6 C5' C B 409 92.022 79.866 24.011 1.00 67.21 C
ATOM 7 C4' C B 409 91.629 78.463 23.611 1.00 68.58 C
ATOM 8 O4' C B 409 91.016 77.781 24.739 1.00 69.17 O
ATOM 9 C3' C B 409 90.572 78.372 22.525 1.00 68.95 C
ATOM 10 O3' C B 409 91.094 78.555 21.225 1.00 69.74 O
ATOM 11 C2' C B 409 90.015 76.978 22.749 1.00 69.33 C
ATOM 12 O2' C B 409 90.888 75.975 22.267 1.00 70.15 O
ATOM 13 C1' C B 409 89.970 76.934 24.277 1.00 68.76 C
ATOM 14 N1 C B 409 88.683 77.436 24.812 1.00 68.33 N
ATOM 15 C2 C B 409 87.588 76.557 24.890 1.00 68.00 C
ATOM 16 O2 C B 409 87.731 75.382 24.531 1.00 67.60 O
ATOM 17 N3 C B 409 86.403 77.018 25.355 1.00 67.30 N
ATOM 18 C4 C B 409 86.284 78.292 25.735 1.00 67.29 C
ATOM 19 N4 C B 409 85.091 78.706 26.172 1.00 66.97 N
ATOM 20 C5 C B 409 87.380 79.201 25.679 1.00 67.23 C
ATOM 21 C6 C B 409 88.547 78.737 25.216 1.00 67.69 C
ATOM 22 P G B 410 90.172 79.230 20.096 1.00 71.88 P
ATOM 23 OP1 G B 410 91.071 79.499 18.942 1.00 71.95 O
ATOM 24 OP2 G B 410 89.397 80.348 20.695 1.00 69.39 O
ATOM 25 O5' G B 410 89.134 78.083 19.705 1.00 71.21 O
TER
ATOM 2 P U A 408 88.730 84.660 29.404 1.00 61.51 P
ATOM 3 OP1 U A 408 89.623 85.778 28.986 1.00 61.70 O
ATOM 4 OP2 U A 408 87.311 84.639 28.943 1.00 59.30 O
ATOM 5 O5' U A 408 89.446 83.288 29.031 1.00 58.12 O
ATOM 6 C5' U A 408 90.868 83.140 29.192 1.00 57.86 C
ATOM 7 C4' U A 408 91.299 81.751 28.795 1.00 59.72 C
ATOM 8 O4' U A 408 90.743 80.785 29.727 1.00 58.31 O
ATOM 9 C3' U A 408 90.823 81.262 27.433 1.00 60.76 C
ATOM 10 O3' U A 408 91.620 81.750 26.355 1.00 61.99 O
ATOM 11 C2' U A 408 90.922 79.753 27.594 1.00 60.11 C
ATOM 12 O2' U A 408 92.258 79.304 27.471 1.00 61.12 O
ATOM 13 C1' U A 408 90.441 79.579 29.039 1.00 58.56 C
ATOM 14 N1 U A 408 88.991 79.337 29.141 1.00 57.93 N
ATOM 15 C2 U A 408 88.549 78.021 29.152 1.00 58.34 C
ATOM 16 O2 U A 408 89.299 77.062 29.088 1.00 60.20 O
ATOM 17 N3 U A 408 87.190 77.867 29.240 1.00 56.83 N
ATOM 18 C4 U A 408 86.244 78.860 29.315 1.00 56.43 C
ATOM 19 O4 U A 408 85.050 78.553 29.385 1.00 56.56 O
ATOM 20 C5 U A 408 86.772 80.188 29.304 1.00 55.13 C
ATOM 21 C6 U A 408 88.092 80.377 29.220 1.00 56.27 C
ATOM 22 P C A 409 90.927 82.085 24.937 1.00 65.06 P
ATOM 23 OP1 C A 409 91.859 82.951 24.173 1.00 63.68 O
ATOM 24 OP2 C A 409 89.530 82.539 25.166 1.00 63.47 O
ATOM 25 O5' C A 409 90.845 80.671 24.209 1.00 66.29 O
TER
ATOM 1 O3' U B 408 91.620 81.750 26.355 1.00 61.99 O
ATOM 2 P C B 409 90.927 82.085 24.937 1.00 65.06 P
ATOM 3 OP1 C B 409 91.859 82.951 24.173 1.00 63.68 O
ATOM 4 OP2 C B 409 89.530 82.539 25.166 1.00 63.47 O
ATOM 5 O5' C B 409 90.845 80.671 24.209 1.00 66.29 O
ATOM 6 C5' C B 409 92.022 79.866 24.011 1.00 67.21 C
ATOM 7 C4' C B 409 91.629 78.463 23.611 1.00 68.58 C
ATOM 8 O4' C B 409 91.016 77.781 24.739 1.00 69.17 O
ATOM 9 C3' C B 409 90.572 78.372 22.525 1.00 68.95 C
ATOM 10 O3' C B 409 91.094 78.555 21.225 1.00 69.74 O
ATOM 11 C2' C B 409 90.015 76.978 22.749 1.00 69.33 C
ATOM 12 O2' C B 409 90.888 75.975 22.267 1.00 70.15 O
ATOM 13 C1' C B 409 89.970 76.934 24.277 1.00 68.76 C
ATOM 14 N1 C B 409 88.683 77.436 24.812 1.00 68.33 N
ATOM 15 C2 C B 409 87.588 76.557 24.890 1.00 68.00 C
ATOM 16 O2 C B 409 87.731 75.382 24.531 1.00 67.60 O
ATOM 17 N3 C B 409 86.403 77.018 25.355 1.00 67.30 N
ATOM 18 C4 C B 409 86.284 78.292 25.735 1.00 67.29 C
ATOM 19 N4 C B 409 85.091 78.706 26.172 1.00 66.97 N
ATOM 20 C5 C B 409 87.380 79.201 25.679 1.00 67.23 C
ATOM 21 C6 C B 409 88.547 78.737 25.216 1.00 67.69 C
ATOM 22 P G B 410 90.172 79.230 20.096 1.00 71.88 P
ATOM 23 OP1 G B 410 91.071 79.499 18.942 1.00 71.95 O
ATOM 24 OP2 G B 410 89.397 80.348 20.695 1.00 69.39 O
ATOM 25 O5' G B 410 89.134 78.083 19.705 1.00 71.21 O
TER
Atoms:
C4: (86.244,78.860,29.315)
N3: (87.190,77.867,29.240)
OP1: (89.623,85.778,28.986)
OP2: (87.311,84.639,28.943)
C2: (88.549,78.021,29.152)
C1': (90.441,79.579,29.039)
C3': (90.823,81.262,27.433)
O5': (89.446,83.288,29.031)
O4': (90.743,80.785,29.727)
C5': (90.868,83.140,29.192)
P: (88.730,84.660,29.404)
C4': (91.299,81.751,28.795)
C2': (90.922,79.753,27.594)
O2': (92.258,79.304,27.471)
N1: (88.991,79.337,29.141)
O4: (85.050,78.553,29.385)
O2: (89.299,77.062,29.088)
C6: (88.092,80.377,29.220)
C5: (86.772,80.188,29.304)
O3': (91.620,81.750,26.355)
N3: (87.190,77.867,29.240)
OP1: (89.623,85.778,28.986)
OP2: (87.311,84.639,28.943)
C2: (88.549,78.021,29.152)
C1': (90.441,79.579,29.039)
C3': (90.823,81.262,27.433)
O5': (89.446,83.288,29.031)
O4': (90.743,80.785,29.727)
C5': (90.868,83.140,29.192)
P: (88.730,84.660,29.404)
C4': (91.299,81.751,28.795)
C2': (90.922,79.753,27.594)
O2': (92.258,79.304,27.471)
N1: (88.991,79.337,29.141)
O4: (85.050,78.553,29.385)
O2: (89.299,77.062,29.088)
C6: (88.092,80.377,29.220)
C5: (86.772,80.188,29.304)
O3': (91.620,81.750,26.355)
C2: (87.588,76.557,24.890)
OP1: (91.859,82.951,24.173)
OP2: (89.530,82.539,25.166)
C4: (86.284,78.292,25.735)
O5': (90.845,80.671,24.209)
C3': (90.572,78.372,22.525)
C1': (89.970,76.934,24.277)
O4': (91.016,77.781,24.739)
C5': (92.022,79.866,24.011)
P: (90.927,82.085,24.937)
O2: (87.731,75.382,24.531)
C4': (91.629,78.463,23.611)
C2': (90.015,76.978,22.749)
O2': (90.888,75.975,22.267)
N1: (88.683,77.436,24.812)
N3: (86.403,77.018,25.355)
N4: (85.091,78.706,26.172)
C6: (88.547,78.737,25.216)
C5: (87.380,79.201,25.679)
O3': (91.094,78.555,21.225)
OP1: (91.859,82.951,24.173)
OP2: (89.530,82.539,25.166)
C4: (86.284,78.292,25.735)
O5': (90.845,80.671,24.209)
C3': (90.572,78.372,22.525)
C1': (89.970,76.934,24.277)
O4': (91.016,77.781,24.739)
C5': (92.022,79.866,24.011)
P: (90.927,82.085,24.937)
O2: (87.731,75.382,24.531)
C4': (91.629,78.463,23.611)
C2': (90.015,76.978,22.749)
O2': (90.888,75.975,22.267)
N1: (88.683,77.436,24.812)
N3: (86.403,77.018,25.355)
N4: (85.091,78.706,26.172)
C6: (88.547,78.737,25.216)
C5: (87.380,79.201,25.679)
O3': (91.094,78.555,21.225)
Image (generated by PyMOL):