Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12823:12824
Extra
PDB:
ATOM 1 O3' A A2822 13.950 74.173 98.797 1.00 72.61 O
ATOM 2 P U A2823 14.263 73.722 97.284 1.00 67.34 P
ATOM 3 OP1 U A2823 12.993 73.183 96.697 1.00 67.10 O
ATOM 4 OP2 U A2823 15.467 72.829 97.333 1.00 66.71 O
ATOM 5 O5' U A2823 14.644 75.104 96.581 1.00 67.89 O
ATOM 6 C5' U A2823 13.851 76.267 96.740 1.00 68.67 C
ATOM 7 C4' U A2823 14.551 77.474 96.163 1.00 69.13 C
ATOM 8 O4' U A2823 15.603 77.923 97.059 1.00 69.43 O
ATOM 9 C3' U A2823 15.251 77.250 94.841 1.00 68.65 C
ATOM 10 O3' U A2823 14.373 77.352 93.744 1.00 68.61 O
ATOM 11 C2' U A2823 16.349 78.305 94.829 1.00 69.09 C
ATOM 12 O2' U A2823 15.872 79.519 94.279 1.00 69.74 O
ATOM 13 C1' U A2823 16.650 78.499 96.326 1.00 69.46 C
ATOM 14 N1 U A2823 17.872 77.824 96.699 1.00 69.01 N
ATOM 15 C2 U A2823 19.066 78.452 96.484 1.00 69.18 C
ATOM 16 O2 U A2823 19.061 79.578 96.053 1.00 69.73 O
ATOM 17 N3 U A2823 20.214 77.750 96.798 1.00 68.72 N
ATOM 18 C4 U A2823 20.225 76.454 97.293 1.00 68.10 C
ATOM 19 O4 U A2823 21.267 75.853 97.575 1.00 67.72 O
ATOM 20 C5 U A2823 18.933 75.883 97.458 1.00 67.96 C
ATOM 21 C6 U A2823 17.819 76.556 97.168 1.00 68.41 C
ATOM 22 P C A2824 14.536 76.365 92.497 1.00 67.98 P
ATOM 23 OP1 C A2824 13.461 76.687 91.546 1.00 68.14 O
ATOM 24 OP2 C A2824 14.615 74.994 93.038 1.00 67.31 O
ATOM 25 O5' C A2824 15.941 76.782 91.889 1.00 67.91 O
TER
ATOM 1 O3' U B2823 14.373 77.352 93.744 1.00 68.61 O
ATOM 2 P C B2824 14.536 76.365 92.497 1.00 67.98 P
ATOM 3 OP1 C B2824 13.461 76.687 91.546 1.00 68.14 O
ATOM 4 OP2 C B2824 14.615 74.994 93.038 1.00 67.31 O
ATOM 5 O5' C B2824 15.941 76.782 91.889 1.00 67.91 O
ATOM 6 C5' C B2824 16.057 77.889 91.027 1.00 68.36 C
ATOM 7 C4' C B2824 17.489 78.277 90.848 1.00 68.36 C
ATOM 8 O4' C B2824 18.155 78.297 92.133 1.00 68.52 O
ATOM 9 C3' C B2824 18.332 77.328 90.031 1.00 67.59 C
ATOM 10 O3' C B2824 18.144 77.493 88.647 1.00 67.48 O
ATOM 11 C2' C B2824 19.723 77.686 90.474 1.00 67.69 C
ATOM 12 O2' C B2824 20.122 78.891 89.856 1.00 68.22 O
ATOM 13 C1' C B2824 19.508 77.944 91.961 1.00 68.12 C
ATOM 14 N1 C B2824 19.785 76.738 92.770 1.00 67.57 N
ATOM 15 C2 C B2824 21.128 76.359 93.069 1.00 67.26 C
ATOM 16 O2 C B2824 22.119 77.015 92.678 1.00 67.45 O
ATOM 17 N3 C B2824 21.347 75.249 93.804 1.00 66.77 N
ATOM 18 C4 C B2824 20.310 74.531 94.241 1.00 66.58 C
ATOM 19 N4 C B2824 20.619 73.449 94.973 1.00 66.11 N
ATOM 20 C5 C B2824 18.943 74.876 93.957 1.00 66.87 C
ATOM 21 C6 C B2824 18.729 75.976 93.226 1.00 67.35 C
ATOM 22 P A B2825 17.768 76.233 87.727 1.00 68.26 P
ATOM 23 OP1 A B2825 17.540 76.755 86.339 1.00 68.37 O
ATOM 24 OP2 A B2825 16.673 75.512 88.405 1.00 68.11 O
ATOM 25 O5' A B2825 19.093 75.348 87.772 1.00 67.62 O
TER
ATOM 2 P U A2823 14.263 73.722 97.284 1.00 67.34 P
ATOM 3 OP1 U A2823 12.993 73.183 96.697 1.00 67.10 O
ATOM 4 OP2 U A2823 15.467 72.829 97.333 1.00 66.71 O
ATOM 5 O5' U A2823 14.644 75.104 96.581 1.00 67.89 O
ATOM 6 C5' U A2823 13.851 76.267 96.740 1.00 68.67 C
ATOM 7 C4' U A2823 14.551 77.474 96.163 1.00 69.13 C
ATOM 8 O4' U A2823 15.603 77.923 97.059 1.00 69.43 O
ATOM 9 C3' U A2823 15.251 77.250 94.841 1.00 68.65 C
ATOM 10 O3' U A2823 14.373 77.352 93.744 1.00 68.61 O
ATOM 11 C2' U A2823 16.349 78.305 94.829 1.00 69.09 C
ATOM 12 O2' U A2823 15.872 79.519 94.279 1.00 69.74 O
ATOM 13 C1' U A2823 16.650 78.499 96.326 1.00 69.46 C
ATOM 14 N1 U A2823 17.872 77.824 96.699 1.00 69.01 N
ATOM 15 C2 U A2823 19.066 78.452 96.484 1.00 69.18 C
ATOM 16 O2 U A2823 19.061 79.578 96.053 1.00 69.73 O
ATOM 17 N3 U A2823 20.214 77.750 96.798 1.00 68.72 N
ATOM 18 C4 U A2823 20.225 76.454 97.293 1.00 68.10 C
ATOM 19 O4 U A2823 21.267 75.853 97.575 1.00 67.72 O
ATOM 20 C5 U A2823 18.933 75.883 97.458 1.00 67.96 C
ATOM 21 C6 U A2823 17.819 76.556 97.168 1.00 68.41 C
ATOM 22 P C A2824 14.536 76.365 92.497 1.00 67.98 P
ATOM 23 OP1 C A2824 13.461 76.687 91.546 1.00 68.14 O
ATOM 24 OP2 C A2824 14.615 74.994 93.038 1.00 67.31 O
ATOM 25 O5' C A2824 15.941 76.782 91.889 1.00 67.91 O
TER
ATOM 1 O3' U B2823 14.373 77.352 93.744 1.00 68.61 O
ATOM 2 P C B2824 14.536 76.365 92.497 1.00 67.98 P
ATOM 3 OP1 C B2824 13.461 76.687 91.546 1.00 68.14 O
ATOM 4 OP2 C B2824 14.615 74.994 93.038 1.00 67.31 O
ATOM 5 O5' C B2824 15.941 76.782 91.889 1.00 67.91 O
ATOM 6 C5' C B2824 16.057 77.889 91.027 1.00 68.36 C
ATOM 7 C4' C B2824 17.489 78.277 90.848 1.00 68.36 C
ATOM 8 O4' C B2824 18.155 78.297 92.133 1.00 68.52 O
ATOM 9 C3' C B2824 18.332 77.328 90.031 1.00 67.59 C
ATOM 10 O3' C B2824 18.144 77.493 88.647 1.00 67.48 O
ATOM 11 C2' C B2824 19.723 77.686 90.474 1.00 67.69 C
ATOM 12 O2' C B2824 20.122 78.891 89.856 1.00 68.22 O
ATOM 13 C1' C B2824 19.508 77.944 91.961 1.00 68.12 C
ATOM 14 N1 C B2824 19.785 76.738 92.770 1.00 67.57 N
ATOM 15 C2 C B2824 21.128 76.359 93.069 1.00 67.26 C
ATOM 16 O2 C B2824 22.119 77.015 92.678 1.00 67.45 O
ATOM 17 N3 C B2824 21.347 75.249 93.804 1.00 66.77 N
ATOM 18 C4 C B2824 20.310 74.531 94.241 1.00 66.58 C
ATOM 19 N4 C B2824 20.619 73.449 94.973 1.00 66.11 N
ATOM 20 C5 C B2824 18.943 74.876 93.957 1.00 66.87 C
ATOM 21 C6 C B2824 18.729 75.976 93.226 1.00 67.35 C
ATOM 22 P A B2825 17.768 76.233 87.727 1.00 68.26 P
ATOM 23 OP1 A B2825 17.540 76.755 86.339 1.00 68.37 O
ATOM 24 OP2 A B2825 16.673 75.512 88.405 1.00 68.11 O
ATOM 25 O5' A B2825 19.093 75.348 87.772 1.00 67.62 O
TER
Atoms:
C4: (20.225,76.454,97.293)
N3: (20.214,77.750,96.798)
OP1: (12.993,73.183,96.697)
OP2: (15.467,72.829,97.333)
C2: (19.066,78.452,96.484)
C1': (16.650,78.499,96.326)
C3': (15.251,77.250,94.841)
O5': (14.644,75.104,96.581)
O4': (15.603,77.923,97.059)
C5': (13.851,76.267,96.740)
P: (14.263,73.722,97.284)
C4': (14.551,77.474,96.163)
C2': (16.349,78.305,94.829)
O2': (15.872,79.519,94.279)
N1: (17.872,77.824,96.699)
O4: (21.267,75.853,97.575)
O2: (19.061,79.578,96.053)
C6: (17.819,76.556,97.168)
C5: (18.933,75.883,97.458)
O3': (14.373,77.352,93.744)
N3: (20.214,77.750,96.798)
OP1: (12.993,73.183,96.697)
OP2: (15.467,72.829,97.333)
C2: (19.066,78.452,96.484)
C1': (16.650,78.499,96.326)
C3': (15.251,77.250,94.841)
O5': (14.644,75.104,96.581)
O4': (15.603,77.923,97.059)
C5': (13.851,76.267,96.740)
P: (14.263,73.722,97.284)
C4': (14.551,77.474,96.163)
C2': (16.349,78.305,94.829)
O2': (15.872,79.519,94.279)
N1: (17.872,77.824,96.699)
O4: (21.267,75.853,97.575)
O2: (19.061,79.578,96.053)
C6: (17.819,76.556,97.168)
C5: (18.933,75.883,97.458)
O3': (14.373,77.352,93.744)
C2: (21.128,76.359,93.069)
OP1: (13.461,76.687,91.546)
OP2: (14.615,74.994,93.038)
C4: (20.310,74.531,94.241)
O5': (15.941,76.782,91.889)
C3': (18.332,77.328,90.031)
C1': (19.508,77.944,91.961)
O4': (18.155,78.297,92.133)
C5': (16.057,77.889,91.027)
P: (14.536,76.365,92.497)
O2: (22.119,77.015,92.678)
C4': (17.489,78.277,90.848)
C2': (19.723,77.686,90.474)
O2': (20.122,78.891,89.856)
N1: (19.785,76.738,92.770)
N3: (21.347,75.249,93.804)
N4: (20.619,73.449,94.973)
C6: (18.729,75.976,93.226)
C5: (18.943,74.876,93.957)
O3': (18.144,77.493,88.647)
OP1: (13.461,76.687,91.546)
OP2: (14.615,74.994,93.038)
C4: (20.310,74.531,94.241)
O5': (15.941,76.782,91.889)
C3': (18.332,77.328,90.031)
C1': (19.508,77.944,91.961)
O4': (18.155,78.297,92.133)
C5': (16.057,77.889,91.027)
P: (14.536,76.365,92.497)
O2: (22.119,77.015,92.678)
C4': (17.489,78.277,90.848)
C2': (19.723,77.686,90.474)
O2': (20.122,78.891,89.856)
N1: (19.785,76.738,92.770)
N3: (21.347,75.249,93.804)
N4: (20.619,73.449,94.973)
C6: (18.729,75.976,93.226)
C5: (18.943,74.876,93.957)
O3': (18.144,77.493,88.647)
Image (generated by PyMOL):