Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01225:01226
Extra
PDB:
ATOM 1 O3' G A1224 1.036 95.467 90.093 1.00 44.13 O
ATOM 2 P U A1225 1.665 95.064 88.674 1.00 44.97 P
ATOM 3 OP1 U A1225 0.611 94.445 87.823 1.00 46.13 O
ATOM 4 OP2 U A1225 2.913 94.306 88.946 1.00 43.15 O
ATOM 5 O5' U A1225 2.047 96.472 88.039 1.00 44.43 O
ATOM 6 C5' U A1225 1.030 97.399 87.639 1.00 43.65 C
ATOM 7 C4' U A1225 1.651 98.701 87.185 1.00 44.52 C
ATOM 8 O4' U A1225 2.332 99.331 88.306 1.00 43.90 O
ATOM 9 C3' U A1225 2.735 98.608 86.121 1.00 43.17 C
ATOM 10 O3' U A1225 2.241 98.459 84.805 1.00 42.44 O
ATOM 11 C2' U A1225 3.454 99.930 86.307 1.00 44.16 C
ATOM 12 O2' U A1225 2.740 101.020 85.765 1.00 44.51 O
ATOM 13 C1' U A1225 3.479 100.030 87.834 1.00 45.74 C
ATOM 14 N1 U A1225 4.691 99.379 88.365 1.00 46.94 N
ATOM 15 C2 U A1225 5.871 100.114 88.377 1.00 46.62 C
ATOM 16 O2 U A1225 5.932 101.283 88.046 1.00 47.52 O
ATOM 17 N3 U A1225 6.978 99.425 88.796 1.00 46.13 N
ATOM 18 C4 U A1225 7.034 98.115 89.209 1.00 46.97 C
ATOM 19 O4 U A1225 8.129 97.606 89.451 1.00 45.53 O
ATOM 20 C5 U A1225 5.773 97.435 89.213 1.00 47.75 C
ATOM 21 C6 U A1225 4.674 98.072 88.804 1.00 46.82 C
ATOM 22 P C A1226 3.145 97.720 83.701 1.00 46.08 P
ATOM 23 OP1 C A1226 2.310 97.516 82.486 1.00 46.21 O
ATOM 24 OP2 C A1226 3.792 96.552 84.345 1.00 42.18 O
ATOM 25 O5' C A1226 4.279 98.787 83.353 1.00 45.63 O
TER
ATOM 1 O3' U B1225 2.241 98.459 84.805 1.00 42.44 O
ATOM 2 P C B1226 3.145 97.720 83.701 1.00 46.08 P
ATOM 3 OP1 C B1226 2.310 97.516 82.486 1.00 46.21 O
ATOM 4 OP2 C B1226 3.792 96.552 84.345 1.00 42.18 O
ATOM 5 O5' C B1226 4.279 98.787 83.353 1.00 45.63 O
ATOM 6 C5' C B1226 3.940 100.120 82.941 1.00 44.76 C
ATOM 7 C4' C B1226 5.170 100.999 82.944 1.00 46.89 C
ATOM 8 O4' C B1226 5.681 101.120 84.301 1.00 46.98 O
ATOM 9 C3' C B1226 6.371 100.510 82.145 1.00 45.94 C
ATOM 10 O3' C B1226 6.259 100.784 80.754 1.00 43.65 O
ATOM 11 C2' C B1226 7.503 101.293 82.794 1.00 47.93 C
ATOM 12 O2' C B1226 7.542 102.649 82.395 1.00 47.44 O
ATOM 13 C1' C B1226 7.095 101.230 84.268 1.00 48.39 C
ATOM 14 N1 C B1226 7.685 100.053 84.939 1.00 50.37 N
ATOM 15 C2 C B1226 9.012 100.137 85.409 1.00 50.76 C
ATOM 16 O2 C B1226 9.635 101.201 85.265 1.00 50.46 O
ATOM 17 N3 C B1226 9.575 99.053 86.001 1.00 50.42 N
ATOM 18 C4 C B1226 8.872 97.922 86.128 1.00 49.82 C
ATOM 19 N4 C B1226 9.471 96.869 86.695 1.00 46.07 N
ATOM 20 C5 C B1226 7.523 97.816 85.671 1.00 49.86 C
ATOM 21 C6 C B1226 6.974 98.894 85.092 1.00 48.84 C
ATOM 22 P C B1227 7.134 99.938 79.697 1.00 45.87 P
ATOM 23 OP1 C B1227 6.783 100.466 78.341 1.00 45.03 O
ATOM 24 OP2 C B1227 7.016 98.489 79.968 1.00 43.71 O
ATOM 25 O5' C B1227 8.641 100.326 80.038 1.00 45.35 O
TER
ATOM 2 P U A1225 1.665 95.064 88.674 1.00 44.97 P
ATOM 3 OP1 U A1225 0.611 94.445 87.823 1.00 46.13 O
ATOM 4 OP2 U A1225 2.913 94.306 88.946 1.00 43.15 O
ATOM 5 O5' U A1225 2.047 96.472 88.039 1.00 44.43 O
ATOM 6 C5' U A1225 1.030 97.399 87.639 1.00 43.65 C
ATOM 7 C4' U A1225 1.651 98.701 87.185 1.00 44.52 C
ATOM 8 O4' U A1225 2.332 99.331 88.306 1.00 43.90 O
ATOM 9 C3' U A1225 2.735 98.608 86.121 1.00 43.17 C
ATOM 10 O3' U A1225 2.241 98.459 84.805 1.00 42.44 O
ATOM 11 C2' U A1225 3.454 99.930 86.307 1.00 44.16 C
ATOM 12 O2' U A1225 2.740 101.020 85.765 1.00 44.51 O
ATOM 13 C1' U A1225 3.479 100.030 87.834 1.00 45.74 C
ATOM 14 N1 U A1225 4.691 99.379 88.365 1.00 46.94 N
ATOM 15 C2 U A1225 5.871 100.114 88.377 1.00 46.62 C
ATOM 16 O2 U A1225 5.932 101.283 88.046 1.00 47.52 O
ATOM 17 N3 U A1225 6.978 99.425 88.796 1.00 46.13 N
ATOM 18 C4 U A1225 7.034 98.115 89.209 1.00 46.97 C
ATOM 19 O4 U A1225 8.129 97.606 89.451 1.00 45.53 O
ATOM 20 C5 U A1225 5.773 97.435 89.213 1.00 47.75 C
ATOM 21 C6 U A1225 4.674 98.072 88.804 1.00 46.82 C
ATOM 22 P C A1226 3.145 97.720 83.701 1.00 46.08 P
ATOM 23 OP1 C A1226 2.310 97.516 82.486 1.00 46.21 O
ATOM 24 OP2 C A1226 3.792 96.552 84.345 1.00 42.18 O
ATOM 25 O5' C A1226 4.279 98.787 83.353 1.00 45.63 O
TER
ATOM 1 O3' U B1225 2.241 98.459 84.805 1.00 42.44 O
ATOM 2 P C B1226 3.145 97.720 83.701 1.00 46.08 P
ATOM 3 OP1 C B1226 2.310 97.516 82.486 1.00 46.21 O
ATOM 4 OP2 C B1226 3.792 96.552 84.345 1.00 42.18 O
ATOM 5 O5' C B1226 4.279 98.787 83.353 1.00 45.63 O
ATOM 6 C5' C B1226 3.940 100.120 82.941 1.00 44.76 C
ATOM 7 C4' C B1226 5.170 100.999 82.944 1.00 46.89 C
ATOM 8 O4' C B1226 5.681 101.120 84.301 1.00 46.98 O
ATOM 9 C3' C B1226 6.371 100.510 82.145 1.00 45.94 C
ATOM 10 O3' C B1226 6.259 100.784 80.754 1.00 43.65 O
ATOM 11 C2' C B1226 7.503 101.293 82.794 1.00 47.93 C
ATOM 12 O2' C B1226 7.542 102.649 82.395 1.00 47.44 O
ATOM 13 C1' C B1226 7.095 101.230 84.268 1.00 48.39 C
ATOM 14 N1 C B1226 7.685 100.053 84.939 1.00 50.37 N
ATOM 15 C2 C B1226 9.012 100.137 85.409 1.00 50.76 C
ATOM 16 O2 C B1226 9.635 101.201 85.265 1.00 50.46 O
ATOM 17 N3 C B1226 9.575 99.053 86.001 1.00 50.42 N
ATOM 18 C4 C B1226 8.872 97.922 86.128 1.00 49.82 C
ATOM 19 N4 C B1226 9.471 96.869 86.695 1.00 46.07 N
ATOM 20 C5 C B1226 7.523 97.816 85.671 1.00 49.86 C
ATOM 21 C6 C B1226 6.974 98.894 85.092 1.00 48.84 C
ATOM 22 P C B1227 7.134 99.938 79.697 1.00 45.87 P
ATOM 23 OP1 C B1227 6.783 100.466 78.341 1.00 45.03 O
ATOM 24 OP2 C B1227 7.016 98.489 79.968 1.00 43.71 O
ATOM 25 O5' C B1227 8.641 100.326 80.038 1.00 45.35 O
TER
Atoms:
C4: (7.034,98.115,89.209)
N3: (6.978,99.425,88.796)
OP1: (0.611,94.445,87.823)
OP2: (2.913,94.306,88.946)
C2: (5.871,100.114,88.377)
C1': (3.479,100.030,87.834)
C3': (2.735,98.608,86.121)
O5': (2.047,96.472,88.039)
O4': (2.332,99.331,88.306)
C5': (1.030,97.399,87.639)
P: (1.665,95.064,88.674)
C4': (1.651,98.701,87.185)
C2': (3.454,99.930,86.307)
O2': (2.740,101.020,85.765)
N1: (4.691,99.379,88.365)
O4: (8.129,97.606,89.451)
O2: (5.932,101.283,88.046)
C6: (4.674,98.072,88.804)
C5: (5.773,97.435,89.213)
O3': (2.241,98.459,84.805)
N3: (6.978,99.425,88.796)
OP1: (0.611,94.445,87.823)
OP2: (2.913,94.306,88.946)
C2: (5.871,100.114,88.377)
C1': (3.479,100.030,87.834)
C3': (2.735,98.608,86.121)
O5': (2.047,96.472,88.039)
O4': (2.332,99.331,88.306)
C5': (1.030,97.399,87.639)
P: (1.665,95.064,88.674)
C4': (1.651,98.701,87.185)
C2': (3.454,99.930,86.307)
O2': (2.740,101.020,85.765)
N1: (4.691,99.379,88.365)
O4: (8.129,97.606,89.451)
O2: (5.932,101.283,88.046)
C6: (4.674,98.072,88.804)
C5: (5.773,97.435,89.213)
O3': (2.241,98.459,84.805)
C2: (9.012,100.137,85.409)
OP1: (2.310,97.516,82.486)
OP2: (3.792,96.552,84.345)
C4: (8.872,97.922,86.128)
O5': (4.279,98.787,83.353)
C3': (6.371,100.510,82.145)
C1': (7.095,101.230,84.268)
O4': (5.681,101.120,84.301)
C5': (3.940,100.120,82.941)
P: (3.145,97.720,83.701)
O2: (9.635,101.201,85.265)
C4': (5.170,100.999,82.944)
C2': (7.503,101.293,82.794)
O2': (7.542,102.649,82.395)
N1: (7.685,100.053,84.939)
N3: (9.575,99.053,86.001)
N4: (9.471,96.869,86.695)
C6: (6.974,98.894,85.092)
C5: (7.523,97.816,85.671)
O3': (6.259,100.784,80.754)
OP1: (2.310,97.516,82.486)
OP2: (3.792,96.552,84.345)
C4: (8.872,97.922,86.128)
O5': (4.279,98.787,83.353)
C3': (6.371,100.510,82.145)
C1': (7.095,101.230,84.268)
O4': (5.681,101.120,84.301)
C5': (3.940,100.120,82.941)
P: (3.145,97.720,83.701)
O2: (9.635,101.201,85.265)
C4': (5.170,100.999,82.944)
C2': (7.503,101.293,82.794)
O2': (7.542,102.649,82.395)
N1: (7.685,100.053,84.939)
N3: (9.575,99.053,86.001)
N4: (9.471,96.869,86.695)
C6: (6.974,98.894,85.092)
C5: (7.523,97.816,85.671)
O3': (6.259,100.784,80.754)
Image (generated by PyMOL):