Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X5:X6
Extra
PDB:
ATOM 1 O3' U A 4 43.872 40.991 19.644 1.00 37.50 O
ATOM 2 P U A 5 43.939 39.476 20.181 1.00 37.68 P
ATOM 3 OP1 U A 5 43.749 39.613 21.650 1.00 40.46 O
ATOM 4 OP2 U A 5 45.179 38.842 19.667 1.00 34.06 O
ATOM 5 O5' U A 5 42.681 38.764 19.517 1.00 34.98 O
ATOM 6 C5' U A 5 41.370 39.198 19.830 1.00 39.62 C
ATOM 7 C4' U A 5 40.334 38.624 18.896 1.00 39.16 C
ATOM 8 O4' U A 5 40.616 38.975 17.510 1.00 43.18 O
ATOM 9 C3' U A 5 40.201 37.111 18.847 1.00 36.57 C
ATOM 10 O3' U A 5 39.582 36.567 20.005 1.00 33.52 O
ATOM 11 C2' U A 5 39.369 36.982 17.577 1.00 31.89 C
ATOM 12 O2' U A 5 38.061 37.474 17.825 1.00 36.05 O
ATOM 13 C1' U A 5 40.068 37.989 16.657 1.00 33.18 C
ATOM 14 N1 U A 5 41.130 37.347 15.838 1.00 30.98 N
ATOM 15 C2 U A 5 40.738 36.732 14.664 1.00 28.92 C
ATOM 16 O2 U A 5 39.585 36.712 14.278 1.00 32.32 O
ATOM 17 N3 U A 5 41.738 36.141 13.948 1.00 28.39 N
ATOM 18 C4 U A 5 43.070 36.086 14.266 1.00 28.14 C
ATOM 19 O4 U A 5 43.836 35.505 13.501 1.00 29.95 O
ATOM 20 C5 U A 5 43.411 36.734 15.501 1.00 29.99 C
ATOM 21 C6 U A 5 42.444 37.327 16.221 1.00 30.44 C
ATOM 22 P C A 6 39.766 35.017 20.440 1.00 35.25 P
ATOM 23 OP1 C A 6 38.953 34.953 21.674 1.00 36.86 O
ATOM 24 OP2 C A 6 41.191 34.611 20.445 1.00 29.03 O
ATOM 25 O5' C A 6 39.045 34.209 19.272 1.00 29.48 O
TER
ATOM 1 O3' U B 5 39.582 36.567 20.005 1.00 33.52 O
ATOM 2 P C B 6 39.766 35.017 20.440 1.00 35.25 P
ATOM 3 OP1 C B 6 38.953 34.953 21.674 1.00 36.86 O
ATOM 4 OP2 C B 6 41.191 34.611 20.445 1.00 29.03 O
ATOM 5 O5' C B 6 39.045 34.209 19.272 1.00 29.48 O
ATOM 6 C5' C B 6 37.635 34.204 19.136 1.00 28.06 C
ATOM 7 C4' C B 6 37.242 33.543 17.841 1.00 29.26 C
ATOM 8 O4' C B 6 37.855 34.235 16.715 1.00 30.23 O
ATOM 9 C3' C B 6 37.679 32.093 17.675 1.00 24.97 C
ATOM 10 O3' C B 6 36.828 31.193 18.378 1.00 25.47 O
ATOM 11 C2' C B 6 37.633 31.939 16.157 1.00 25.48 C
ATOM 12 O2' C B 6 36.294 31.816 15.708 1.00 25.51 O
ATOM 13 C1' C B 6 38.150 33.300 15.692 1.00 26.81 C
ATOM 14 N1 C B 6 39.602 33.189 15.491 1.00 27.11 N
ATOM 15 C2 C B 6 40.060 32.584 14.317 1.00 25.63 C
ATOM 16 O2 C B 6 39.209 32.199 13.503 1.00 23.68 O
ATOM 17 N3 C B 6 41.398 32.452 14.103 1.00 27.72 N
ATOM 18 C4 C B 6 42.258 32.896 15.023 1.00 27.43 C
ATOM 19 N4 C B 6 43.570 32.760 14.801 1.00 26.37 N
ATOM 20 C5 C B 6 41.814 33.508 16.232 1.00 27.02 C
ATOM 21 C6 C B 6 40.495 33.628 16.429 1.00 29.91 C
ATOM 22 P G B 7 37.397 30.180 19.504 1.00 23.62 P
ATOM 23 OP1 G B 7 36.207 29.510 20.100 1.00 23.28 O
ATOM 24 OP2 G B 7 38.321 30.913 20.410 1.00 26.60 O
ATOM 25 O5' G B 7 38.243 29.156 18.652 1.00 22.21 O
TER
ATOM 2 P U A 5 43.939 39.476 20.181 1.00 37.68 P
ATOM 3 OP1 U A 5 43.749 39.613 21.650 1.00 40.46 O
ATOM 4 OP2 U A 5 45.179 38.842 19.667 1.00 34.06 O
ATOM 5 O5' U A 5 42.681 38.764 19.517 1.00 34.98 O
ATOM 6 C5' U A 5 41.370 39.198 19.830 1.00 39.62 C
ATOM 7 C4' U A 5 40.334 38.624 18.896 1.00 39.16 C
ATOM 8 O4' U A 5 40.616 38.975 17.510 1.00 43.18 O
ATOM 9 C3' U A 5 40.201 37.111 18.847 1.00 36.57 C
ATOM 10 O3' U A 5 39.582 36.567 20.005 1.00 33.52 O
ATOM 11 C2' U A 5 39.369 36.982 17.577 1.00 31.89 C
ATOM 12 O2' U A 5 38.061 37.474 17.825 1.00 36.05 O
ATOM 13 C1' U A 5 40.068 37.989 16.657 1.00 33.18 C
ATOM 14 N1 U A 5 41.130 37.347 15.838 1.00 30.98 N
ATOM 15 C2 U A 5 40.738 36.732 14.664 1.00 28.92 C
ATOM 16 O2 U A 5 39.585 36.712 14.278 1.00 32.32 O
ATOM 17 N3 U A 5 41.738 36.141 13.948 1.00 28.39 N
ATOM 18 C4 U A 5 43.070 36.086 14.266 1.00 28.14 C
ATOM 19 O4 U A 5 43.836 35.505 13.501 1.00 29.95 O
ATOM 20 C5 U A 5 43.411 36.734 15.501 1.00 29.99 C
ATOM 21 C6 U A 5 42.444 37.327 16.221 1.00 30.44 C
ATOM 22 P C A 6 39.766 35.017 20.440 1.00 35.25 P
ATOM 23 OP1 C A 6 38.953 34.953 21.674 1.00 36.86 O
ATOM 24 OP2 C A 6 41.191 34.611 20.445 1.00 29.03 O
ATOM 25 O5' C A 6 39.045 34.209 19.272 1.00 29.48 O
TER
ATOM 1 O3' U B 5 39.582 36.567 20.005 1.00 33.52 O
ATOM 2 P C B 6 39.766 35.017 20.440 1.00 35.25 P
ATOM 3 OP1 C B 6 38.953 34.953 21.674 1.00 36.86 O
ATOM 4 OP2 C B 6 41.191 34.611 20.445 1.00 29.03 O
ATOM 5 O5' C B 6 39.045 34.209 19.272 1.00 29.48 O
ATOM 6 C5' C B 6 37.635 34.204 19.136 1.00 28.06 C
ATOM 7 C4' C B 6 37.242 33.543 17.841 1.00 29.26 C
ATOM 8 O4' C B 6 37.855 34.235 16.715 1.00 30.23 O
ATOM 9 C3' C B 6 37.679 32.093 17.675 1.00 24.97 C
ATOM 10 O3' C B 6 36.828 31.193 18.378 1.00 25.47 O
ATOM 11 C2' C B 6 37.633 31.939 16.157 1.00 25.48 C
ATOM 12 O2' C B 6 36.294 31.816 15.708 1.00 25.51 O
ATOM 13 C1' C B 6 38.150 33.300 15.692 1.00 26.81 C
ATOM 14 N1 C B 6 39.602 33.189 15.491 1.00 27.11 N
ATOM 15 C2 C B 6 40.060 32.584 14.317 1.00 25.63 C
ATOM 16 O2 C B 6 39.209 32.199 13.503 1.00 23.68 O
ATOM 17 N3 C B 6 41.398 32.452 14.103 1.00 27.72 N
ATOM 18 C4 C B 6 42.258 32.896 15.023 1.00 27.43 C
ATOM 19 N4 C B 6 43.570 32.760 14.801 1.00 26.37 N
ATOM 20 C5 C B 6 41.814 33.508 16.232 1.00 27.02 C
ATOM 21 C6 C B 6 40.495 33.628 16.429 1.00 29.91 C
ATOM 22 P G B 7 37.397 30.180 19.504 1.00 23.62 P
ATOM 23 OP1 G B 7 36.207 29.510 20.100 1.00 23.28 O
ATOM 24 OP2 G B 7 38.321 30.913 20.410 1.00 26.60 O
ATOM 25 O5' G B 7 38.243 29.156 18.652 1.00 22.21 O
TER
Atoms:
C4: (43.070,36.086,14.266)
N3: (41.738,36.141,13.948)
OP1: (43.749,39.613,21.650)
OP2: (45.179,38.842,19.667)
C2: (40.738,36.732,14.664)
C1': (40.068,37.989,16.657)
C3': (40.201,37.111,18.847)
O5': (42.681,38.764,19.517)
O4': (40.616,38.975,17.510)
C5': (41.370,39.198,19.830)
P: (43.939,39.476,20.181)
C4': (40.334,38.624,18.896)
C2': (39.369,36.982,17.577)
O2': (38.061,37.474,17.825)
N1: (41.130,37.347,15.838)
O4: (43.836,35.505,13.501)
O2: (39.585,36.712,14.278)
C6: (42.444,37.327,16.221)
C5: (43.411,36.734,15.501)
O3': (39.582,36.567,20.005)
N3: (41.738,36.141,13.948)
OP1: (43.749,39.613,21.650)
OP2: (45.179,38.842,19.667)
C2: (40.738,36.732,14.664)
C1': (40.068,37.989,16.657)
C3': (40.201,37.111,18.847)
O5': (42.681,38.764,19.517)
O4': (40.616,38.975,17.510)
C5': (41.370,39.198,19.830)
P: (43.939,39.476,20.181)
C4': (40.334,38.624,18.896)
C2': (39.369,36.982,17.577)
O2': (38.061,37.474,17.825)
N1: (41.130,37.347,15.838)
O4: (43.836,35.505,13.501)
O2: (39.585,36.712,14.278)
C6: (42.444,37.327,16.221)
C5: (43.411,36.734,15.501)
O3': (39.582,36.567,20.005)
C2: (40.060,32.584,14.317)
OP1: (38.953,34.953,21.674)
OP2: (41.191,34.611,20.445)
C4: (42.258,32.896,15.023)
O5': (39.045,34.209,19.272)
C3': (37.679,32.093,17.675)
C1': (38.150,33.300,15.692)
O4': (37.855,34.235,16.715)
C5': (37.635,34.204,19.136)
P: (39.766,35.017,20.440)
O2: (39.209,32.199,13.503)
C4': (37.242,33.543,17.841)
C2': (37.633,31.939,16.157)
O2': (36.294,31.816,15.708)
N1: (39.602,33.189,15.491)
N3: (41.398,32.452,14.103)
N4: (43.570,32.760,14.801)
C6: (40.495,33.628,16.429)
C5: (41.814,33.508,16.232)
O3': (36.828,31.193,18.378)
OP1: (38.953,34.953,21.674)
OP2: (41.191,34.611,20.445)
C4: (42.258,32.896,15.023)
O5': (39.045,34.209,19.272)
C3': (37.679,32.093,17.675)
C1': (38.150,33.300,15.692)
O4': (37.855,34.235,16.715)
C5': (37.635,34.204,19.136)
P: (39.766,35.017,20.440)
O2: (39.209,32.199,13.503)
C4': (37.242,33.543,17.841)
C2': (37.633,31.939,16.157)
O2': (36.294,31.816,15.708)
N1: (39.602,33.189,15.491)
N3: (41.398,32.452,14.103)
N4: (43.570,32.760,14.801)
C6: (40.495,33.628,16.429)
C5: (41.814,33.508,16.232)
O3': (36.828,31.193,18.378)
Image (generated by PyMOL):