Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01597:01598
Extra
PDB:
ATOM 1 O3' U A1596 109.745 189.648 85.427 1.00 66.18 O
ATOM 2 P U A1597 110.227 188.400 84.520 1.00 67.96 P
ATOM 3 OP1 U A1597 111.435 187.784 85.131 1.00 67.22 O
ATOM 4 OP2 U A1597 110.271 188.819 83.093 1.00 66.88 O
ATOM 5 O5' U A1597 109.032 187.358 84.669 1.00 68.04 O
ATOM 6 C5' U A1597 108.589 186.895 85.965 1.00 64.51 C
ATOM 7 C4' U A1597 107.294 186.127 85.823 1.00 63.03 C
ATOM 8 O4' U A1597 106.210 187.038 85.503 1.00 63.14 O
ATOM 9 C3' U A1597 107.269 185.123 84.685 1.00 62.29 C
ATOM 10 O3' U A1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 11 C2' U A1597 105.783 184.969 84.420 1.00 62.38 C
ATOM 12 O2' U A1597 105.151 184.143 85.373 1.00 63.44 O
ATOM 13 C1' U A1597 105.305 186.408 84.609 1.00 63.39 C
ATOM 14 N1 U A1597 105.278 187.175 83.354 1.00 64.59 N
ATOM 15 C2 U A1597 104.052 187.350 82.720 1.00 65.58 C
ATOM 16 O2 U A1597 103.007 186.891 83.144 1.00 66.24 O
ATOM 17 N3 U A1597 104.099 188.086 81.564 1.00 66.84 N
ATOM 18 C4 U A1597 105.216 188.653 80.985 1.00 67.77 C
ATOM 19 O4 U A1597 105.091 189.313 79.950 1.00 69.35 O
ATOM 20 C5 U A1597 106.440 188.420 81.691 1.00 66.55 C
ATOM 21 C6 U A1597 106.429 187.709 82.820 1.00 65.11 C
ATOM 22 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 23 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 24 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 25 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
TER
ATOM 1 O3' U B1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 2 P C B1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C B1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C B1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C B1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C B1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C B1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C B1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C B1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C B1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C B1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C B1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C B1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C B1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C B1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C B1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C B1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C B1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C B1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C B1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C B1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A B1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A B1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A B1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A B1599 104.016 179.619 77.755 1.00 68.41 O
TER
ATOM 2 P U A1597 110.227 188.400 84.520 1.00 67.96 P
ATOM 3 OP1 U A1597 111.435 187.784 85.131 1.00 67.22 O
ATOM 4 OP2 U A1597 110.271 188.819 83.093 1.00 66.88 O
ATOM 5 O5' U A1597 109.032 187.358 84.669 1.00 68.04 O
ATOM 6 C5' U A1597 108.589 186.895 85.965 1.00 64.51 C
ATOM 7 C4' U A1597 107.294 186.127 85.823 1.00 63.03 C
ATOM 8 O4' U A1597 106.210 187.038 85.503 1.00 63.14 O
ATOM 9 C3' U A1597 107.269 185.123 84.685 1.00 62.29 C
ATOM 10 O3' U A1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 11 C2' U A1597 105.783 184.969 84.420 1.00 62.38 C
ATOM 12 O2' U A1597 105.151 184.143 85.373 1.00 63.44 O
ATOM 13 C1' U A1597 105.305 186.408 84.609 1.00 63.39 C
ATOM 14 N1 U A1597 105.278 187.175 83.354 1.00 64.59 N
ATOM 15 C2 U A1597 104.052 187.350 82.720 1.00 65.58 C
ATOM 16 O2 U A1597 103.007 186.891 83.144 1.00 66.24 O
ATOM 17 N3 U A1597 104.099 188.086 81.564 1.00 66.84 N
ATOM 18 C4 U A1597 105.216 188.653 80.985 1.00 67.77 C
ATOM 19 O4 U A1597 105.091 189.313 79.950 1.00 69.35 O
ATOM 20 C5 U A1597 106.440 188.420 81.691 1.00 66.55 C
ATOM 21 C6 U A1597 106.429 187.709 82.820 1.00 65.11 C
ATOM 22 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 23 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 24 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 25 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
TER
ATOM 1 O3' U B1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 2 P C B1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C B1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C B1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C B1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C B1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C B1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C B1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C B1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C B1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C B1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C B1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C B1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C B1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C B1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C B1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C B1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C B1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C B1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C B1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C B1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A B1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A B1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A B1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A B1599 104.016 179.619 77.755 1.00 68.41 O
TER
Atoms:
C4: (105.216,188.653,80.985)
N3: (104.099,188.086,81.564)
OP1: (111.435,187.784,85.131)
OP2: (110.271,188.819,83.093)
C2: (104.052,187.350,82.720)
C1': (105.305,186.408,84.609)
C3': (107.269,185.123,84.685)
O5': (109.032,187.358,84.669)
O4': (106.210,187.038,85.503)
C5': (108.589,186.895,85.965)
P: (110.227,188.400,84.520)
C4': (107.294,186.127,85.823)
C2': (105.783,184.969,84.420)
O2': (105.151,184.143,85.373)
N1: (105.278,187.175,83.354)
O4: (105.091,189.313,79.950)
O2: (103.007,186.891,83.144)
C6: (106.429,187.709,82.820)
C5: (106.440,188.420,81.691)
O3': (107.898,183.902,85.024)
N3: (104.099,188.086,81.564)
OP1: (111.435,187.784,85.131)
OP2: (110.271,188.819,83.093)
C2: (104.052,187.350,82.720)
C1': (105.305,186.408,84.609)
C3': (107.269,185.123,84.685)
O5': (109.032,187.358,84.669)
O4': (106.210,187.038,85.503)
C5': (108.589,186.895,85.965)
P: (110.227,188.400,84.520)
C4': (107.294,186.127,85.823)
C2': (105.783,184.969,84.420)
O2': (105.151,184.143,85.373)
N1: (105.278,187.175,83.354)
O4: (105.091,189.313,79.950)
O2: (103.007,186.891,83.144)
C6: (106.429,187.709,82.820)
C5: (106.440,188.420,81.691)
O3': (107.898,183.902,85.024)
C2: (105.085,186.443,78.573)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
Image (generated by PyMOL):