Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01144:01145
Extra
PDB:
ATOM 1 O3' C A1143 62.480 65.157 189.519 1.00114.39 O
ATOM 2 P U A1144 60.881 65.125 189.688 1.00114.28 P
ATOM 3 OP1 U A1144 60.538 63.883 190.423 1.00115.85 O
ATOM 4 OP2 U A1144 60.219 65.398 188.388 1.00113.29 O
ATOM 5 O5' U A1144 60.614 66.350 190.671 1.00114.08 O
ATOM 6 C5' U A1144 61.265 66.402 191.960 1.00113.37 C
ATOM 7 C4' U A1144 61.095 67.762 192.590 1.00112.80 C
ATOM 8 O4' U A1144 61.752 68.773 191.789 1.00113.97 O
ATOM 9 C3' U A1144 59.669 68.259 192.688 1.00112.53 C
ATOM 10 O3' U A1144 59.024 67.679 193.810 1.00110.88 O
ATOM 11 C2' U A1144 59.856 69.764 192.841 1.00113.84 C
ATOM 12 O2' U A1144 60.184 70.150 194.159 1.00114.82 O
ATOM 13 C1' U A1144 61.078 70.013 191.952 1.00114.91 C
ATOM 14 N1 U A1144 60.817 70.609 190.628 1.00115.92 N
ATOM 15 C2 U A1144 60.204 71.855 190.580 1.00116.11 C
ATOM 16 O2 U A1144 59.827 72.456 191.576 1.00116.12 O
ATOM 17 N3 U A1144 60.045 72.372 189.317 1.00116.40 N
ATOM 18 C4 U A1144 60.419 71.787 188.123 1.00116.75 C
ATOM 19 O4 U A1144 60.271 72.408 187.070 1.00117.59 O
ATOM 20 C5 U A1144 61.016 70.500 188.254 1.00116.73 C
ATOM 21 C6 U A1144 61.187 69.966 189.468 1.00116.68 C
ATOM 22 P C A1145 57.425 67.619 193.860 1.00109.81 P
ATOM 23 OP1 C A1145 57.041 67.017 195.162 1.00110.31 O
ATOM 24 OP2 C A1145 56.941 67.010 192.597 1.00110.58 O
ATOM 25 O5' C A1145 56.995 69.148 193.871 1.00109.62 O
TER
ATOM 1 O3' U B1144 59.024 67.679 193.810 1.00110.88 O
ATOM 2 P C B1145 57.425 67.619 193.860 1.00109.81 P
ATOM 3 OP1 C B1145 57.041 67.017 195.162 1.00110.31 O
ATOM 4 OP2 C B1145 56.941 67.010 192.597 1.00110.58 O
ATOM 5 O5' C B1145 56.995 69.148 193.871 1.00109.62 O
ATOM 6 C5' C B1145 57.319 69.993 194.984 1.00108.60 C
ATOM 7 C4' C B1145 56.838 71.393 194.720 1.00107.96 C
ATOM 8 O4' C B1145 57.619 71.995 193.656 1.00107.34 O
ATOM 9 C3' C B1145 55.412 71.482 194.214 1.00107.82 C
ATOM 10 O3' C B1145 54.471 71.377 195.273 1.00107.49 O
ATOM 11 C2' C B1145 55.403 72.846 193.542 1.00108.40 C
ATOM 12 O2' C B1145 55.314 73.905 194.474 1.00109.26 O
ATOM 13 C1' C B1145 56.792 72.870 192.903 1.00108.32 C
ATOM 14 N1 C B1145 56.813 72.455 191.486 1.00108.83 N
ATOM 15 C2 C B1145 56.528 73.411 190.495 1.00108.69 C
ATOM 16 O2 C B1145 56.218 74.564 190.836 1.00108.68 O
ATOM 17 N3 C B1145 56.597 73.053 189.194 1.00108.55 N
ATOM 18 C4 C B1145 56.929 71.805 188.861 1.00108.85 C
ATOM 19 N4 C B1145 57.021 71.508 187.561 1.00108.62 N
ATOM 20 C5 C B1145 57.191 70.806 189.843 1.00109.43 C
ATOM 21 C6 C B1145 57.119 71.170 191.131 1.00109.55 C
ATOM 22 P U B1146 53.079 70.615 195.023 1.00107.02 P
ATOM 23 OP1 U B1146 52.209 70.825 196.213 1.00105.49 O
ATOM 24 OP2 U B1146 53.414 69.235 194.589 1.00106.76 O
ATOM 25 O5' U B1146 52.436 71.386 193.780 1.00106.85 O
TER
ATOM 2 P U A1144 60.881 65.125 189.688 1.00114.28 P
ATOM 3 OP1 U A1144 60.538 63.883 190.423 1.00115.85 O
ATOM 4 OP2 U A1144 60.219 65.398 188.388 1.00113.29 O
ATOM 5 O5' U A1144 60.614 66.350 190.671 1.00114.08 O
ATOM 6 C5' U A1144 61.265 66.402 191.960 1.00113.37 C
ATOM 7 C4' U A1144 61.095 67.762 192.590 1.00112.80 C
ATOM 8 O4' U A1144 61.752 68.773 191.789 1.00113.97 O
ATOM 9 C3' U A1144 59.669 68.259 192.688 1.00112.53 C
ATOM 10 O3' U A1144 59.024 67.679 193.810 1.00110.88 O
ATOM 11 C2' U A1144 59.856 69.764 192.841 1.00113.84 C
ATOM 12 O2' U A1144 60.184 70.150 194.159 1.00114.82 O
ATOM 13 C1' U A1144 61.078 70.013 191.952 1.00114.91 C
ATOM 14 N1 U A1144 60.817 70.609 190.628 1.00115.92 N
ATOM 15 C2 U A1144 60.204 71.855 190.580 1.00116.11 C
ATOM 16 O2 U A1144 59.827 72.456 191.576 1.00116.12 O
ATOM 17 N3 U A1144 60.045 72.372 189.317 1.00116.40 N
ATOM 18 C4 U A1144 60.419 71.787 188.123 1.00116.75 C
ATOM 19 O4 U A1144 60.271 72.408 187.070 1.00117.59 O
ATOM 20 C5 U A1144 61.016 70.500 188.254 1.00116.73 C
ATOM 21 C6 U A1144 61.187 69.966 189.468 1.00116.68 C
ATOM 22 P C A1145 57.425 67.619 193.860 1.00109.81 P
ATOM 23 OP1 C A1145 57.041 67.017 195.162 1.00110.31 O
ATOM 24 OP2 C A1145 56.941 67.010 192.597 1.00110.58 O
ATOM 25 O5' C A1145 56.995 69.148 193.871 1.00109.62 O
TER
ATOM 1 O3' U B1144 59.024 67.679 193.810 1.00110.88 O
ATOM 2 P C B1145 57.425 67.619 193.860 1.00109.81 P
ATOM 3 OP1 C B1145 57.041 67.017 195.162 1.00110.31 O
ATOM 4 OP2 C B1145 56.941 67.010 192.597 1.00110.58 O
ATOM 5 O5' C B1145 56.995 69.148 193.871 1.00109.62 O
ATOM 6 C5' C B1145 57.319 69.993 194.984 1.00108.60 C
ATOM 7 C4' C B1145 56.838 71.393 194.720 1.00107.96 C
ATOM 8 O4' C B1145 57.619 71.995 193.656 1.00107.34 O
ATOM 9 C3' C B1145 55.412 71.482 194.214 1.00107.82 C
ATOM 10 O3' C B1145 54.471 71.377 195.273 1.00107.49 O
ATOM 11 C2' C B1145 55.403 72.846 193.542 1.00108.40 C
ATOM 12 O2' C B1145 55.314 73.905 194.474 1.00109.26 O
ATOM 13 C1' C B1145 56.792 72.870 192.903 1.00108.32 C
ATOM 14 N1 C B1145 56.813 72.455 191.486 1.00108.83 N
ATOM 15 C2 C B1145 56.528 73.411 190.495 1.00108.69 C
ATOM 16 O2 C B1145 56.218 74.564 190.836 1.00108.68 O
ATOM 17 N3 C B1145 56.597 73.053 189.194 1.00108.55 N
ATOM 18 C4 C B1145 56.929 71.805 188.861 1.00108.85 C
ATOM 19 N4 C B1145 57.021 71.508 187.561 1.00108.62 N
ATOM 20 C5 C B1145 57.191 70.806 189.843 1.00109.43 C
ATOM 21 C6 C B1145 57.119 71.170 191.131 1.00109.55 C
ATOM 22 P U B1146 53.079 70.615 195.023 1.00107.02 P
ATOM 23 OP1 U B1146 52.209 70.825 196.213 1.00105.49 O
ATOM 24 OP2 U B1146 53.414 69.235 194.589 1.00106.76 O
ATOM 25 O5' U B1146 52.436 71.386 193.780 1.00106.85 O
TER
Atoms:
C4: (60.419,71.787,188.123)
N3: (60.045,72.372,189.317)
OP1: (60.538,63.883,190.423)
OP2: (60.219,65.398,188.388)
C2: (60.204,71.855,190.580)
C1': (61.078,70.013,191.952)
C3': (59.669,68.259,192.688)
O5': (60.614,66.350,190.671)
O4': (61.752,68.773,191.789)
C5': (61.265,66.402,191.960)
P: (60.881,65.125,189.688)
C4': (61.095,67.762,192.590)
C2': (59.856,69.764,192.841)
O2': (60.184,70.150,194.159)
N1: (60.817,70.609,190.628)
O4: (60.271,72.408,187.070)
O2: (59.827,72.456,191.576)
C6: (61.187,69.966,189.468)
C5: (61.016,70.500,188.254)
O3': (59.024,67.679,193.810)
N3: (60.045,72.372,189.317)
OP1: (60.538,63.883,190.423)
OP2: (60.219,65.398,188.388)
C2: (60.204,71.855,190.580)
C1': (61.078,70.013,191.952)
C3': (59.669,68.259,192.688)
O5': (60.614,66.350,190.671)
O4': (61.752,68.773,191.789)
C5': (61.265,66.402,191.960)
P: (60.881,65.125,189.688)
C4': (61.095,67.762,192.590)
C2': (59.856,69.764,192.841)
O2': (60.184,70.150,194.159)
N1: (60.817,70.609,190.628)
O4: (60.271,72.408,187.070)
O2: (59.827,72.456,191.576)
C6: (61.187,69.966,189.468)
C5: (61.016,70.500,188.254)
O3': (59.024,67.679,193.810)
C2: (56.528,73.411,190.495)
OP1: (57.041,67.017,195.162)
OP2: (56.941,67.010,192.597)
C4: (56.929,71.805,188.861)
O5': (56.995,69.148,193.871)
C3': (55.412,71.482,194.214)
C1': (56.792,72.870,192.903)
O4': (57.619,71.995,193.656)
C5': (57.319,69.993,194.984)
P: (57.425,67.619,193.860)
O2: (56.218,74.564,190.836)
C4': (56.838,71.393,194.720)
C2': (55.403,72.846,193.542)
O2': (55.314,73.905,194.474)
N1: (56.813,72.455,191.486)
N3: (56.597,73.053,189.194)
N4: (57.021,71.508,187.561)
C6: (57.119,71.170,191.131)
C5: (57.191,70.806,189.843)
O3': (54.471,71.377,195.273)
OP1: (57.041,67.017,195.162)
OP2: (56.941,67.010,192.597)
C4: (56.929,71.805,188.861)
O5': (56.995,69.148,193.871)
C3': (55.412,71.482,194.214)
C1': (56.792,72.870,192.903)
O4': (57.619,71.995,193.656)
C5': (57.319,69.993,194.984)
P: (57.425,67.619,193.860)
O2: (56.218,74.564,190.836)
C4': (56.838,71.393,194.720)
C2': (55.403,72.846,193.542)
O2': (55.314,73.905,194.474)
N1: (56.813,72.455,191.486)
N3: (56.597,73.053,189.194)
N4: (57.021,71.508,187.561)
C6: (57.119,71.170,191.131)
C5: (57.191,70.806,189.843)
O3': (54.471,71.377,195.273)
Image (generated by PyMOL):