Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NPQ:A32:A33
Extra
PDB:
ATOM 1 O3' C A 31 37.205 -26.685 12.321 1.00 56.42 O
ATOM 2 P U A 32 38.623 -26.379 11.645 1.00 46.83 P
ATOM 3 OP1 U A 32 39.472 -27.579 11.804 1.00 56.83 O
ATOM 4 OP2 U A 32 39.095 -25.067 12.141 1.00 48.36 O
ATOM 5 O5' U A 32 38.247 -26.217 10.101 1.00 42.84 O
ATOM 6 C5' U A 32 37.590 -27.277 9.419 1.00 51.63 C
ATOM 7 C4' U A 32 37.061 -26.796 8.082 1.00 49.88 C
ATOM 8 O4' U A 32 35.979 -25.854 8.290 1.00 47.83 O
ATOM 9 C3' U A 32 38.065 -26.023 7.243 1.00 46.54 C
ATOM 10 O3' U A 32 38.909 -26.916 6.530 1.00 50.80 O
ATOM 11 C2' U A 32 37.131 -25.261 6.313 1.00 41.39 C
ATOM 12 O2' U A 32 36.624 -26.076 5.276 1.00 45.14 O
ATOM 13 C1' U A 32 36.008 -24.871 7.271 1.00 39.43 C
ATOM 14 N1 U A 32 36.199 -23.528 7.894 1.00 33.57 N
ATOM 15 C2 U A 32 35.833 -22.402 7.187 1.00 28.17 C
ATOM 16 O2 U A 32 35.356 -22.443 6.067 1.00 30.90 O
ATOM 17 N3 U A 32 36.046 -21.214 7.842 1.00 21.97 N
ATOM 18 C4 U A 32 36.577 -21.044 9.107 1.00 24.17 C
ATOM 19 O4 U A 32 36.709 -19.914 9.565 1.00 28.14 O
ATOM 20 C5 U A 32 36.935 -22.265 9.781 1.00 28.13 C
ATOM 21 C6 U A 32 36.736 -23.434 9.162 1.00 32.96 C
ATOM 22 P C A 33 40.440 -26.525 6.279 1.00 42.43 P
ATOM 23 OP1 C A 33 41.148 -27.735 5.806 1.00 51.52 O
ATOM 24 OP2 C A 33 40.929 -25.800 7.473 1.00 38.66 O
ATOM 25 O5' C A 33 40.341 -25.478 5.075 1.00 39.40 O
TER
ATOM 1 O3' U B 32 38.909 -26.916 6.530 1.00 50.80 O
ATOM 2 P C B 33 40.440 -26.525 6.279 1.00 42.43 P
ATOM 3 OP1 C B 33 41.148 -27.735 5.806 1.00 51.52 O
ATOM 4 OP2 C B 33 40.929 -25.800 7.473 1.00 38.66 O
ATOM 5 O5' C B 33 40.341 -25.478 5.075 1.00 39.40 O
ATOM 6 C5' C B 33 39.758 -25.878 3.843 1.00 40.31 C
ATOM 7 C4' C B 33 39.306 -24.670 3.046 1.00 32.16 C
ATOM 8 O4' C B 33 38.311 -23.933 3.801 1.00 37.22 O
ATOM 9 C3' C B 33 40.386 -23.639 2.762 1.00 36.56 C
ATOM 10 O3' C B 33 41.157 -24.022 1.630 1.00 40.49 O
ATOM 11 C2' C B 33 39.524 -22.420 2.461 1.00 30.99 C
ATOM 12 O2' C B 33 38.968 -22.479 1.164 1.00 33.66 O
ATOM 13 C1' C B 33 38.429 -22.552 3.512 1.00 31.76 C
ATOM 14 N1 C B 33 38.729 -21.808 4.769 1.00 29.51 N
ATOM 15 C2 C B 33 38.539 -20.423 4.809 1.00 22.10 C
ATOM 16 O2 C B 33 38.126 -19.843 3.798 1.00 23.41 O
ATOM 17 N3 C B 33 38.815 -19.754 5.955 1.00 19.50 N
ATOM 18 C4 C B 33 39.261 -20.416 7.024 1.00 20.39 C
ATOM 19 N4 C B 33 39.519 -19.713 8.131 1.00 22.74 N
ATOM 20 C5 C B 33 39.461 -21.828 7.003 1.00 21.17 C
ATOM 21 C6 C B 33 39.185 -22.477 5.867 1.00 25.35 C
ATOM 22 P G B 34 42.700 -23.607 1.528 1.00 46.36 P
ATOM 23 OP1 G B 34 43.414 -24.680 0.802 1.00 63.04 O
ATOM 24 OP2 G B 34 43.147 -23.208 2.882 1.00 44.18 O
ATOM 25 O5' G B 34 42.668 -22.291 0.619 1.00 41.14 O
TER
ATOM 2 P U A 32 38.623 -26.379 11.645 1.00 46.83 P
ATOM 3 OP1 U A 32 39.472 -27.579 11.804 1.00 56.83 O
ATOM 4 OP2 U A 32 39.095 -25.067 12.141 1.00 48.36 O
ATOM 5 O5' U A 32 38.247 -26.217 10.101 1.00 42.84 O
ATOM 6 C5' U A 32 37.590 -27.277 9.419 1.00 51.63 C
ATOM 7 C4' U A 32 37.061 -26.796 8.082 1.00 49.88 C
ATOM 8 O4' U A 32 35.979 -25.854 8.290 1.00 47.83 O
ATOM 9 C3' U A 32 38.065 -26.023 7.243 1.00 46.54 C
ATOM 10 O3' U A 32 38.909 -26.916 6.530 1.00 50.80 O
ATOM 11 C2' U A 32 37.131 -25.261 6.313 1.00 41.39 C
ATOM 12 O2' U A 32 36.624 -26.076 5.276 1.00 45.14 O
ATOM 13 C1' U A 32 36.008 -24.871 7.271 1.00 39.43 C
ATOM 14 N1 U A 32 36.199 -23.528 7.894 1.00 33.57 N
ATOM 15 C2 U A 32 35.833 -22.402 7.187 1.00 28.17 C
ATOM 16 O2 U A 32 35.356 -22.443 6.067 1.00 30.90 O
ATOM 17 N3 U A 32 36.046 -21.214 7.842 1.00 21.97 N
ATOM 18 C4 U A 32 36.577 -21.044 9.107 1.00 24.17 C
ATOM 19 O4 U A 32 36.709 -19.914 9.565 1.00 28.14 O
ATOM 20 C5 U A 32 36.935 -22.265 9.781 1.00 28.13 C
ATOM 21 C6 U A 32 36.736 -23.434 9.162 1.00 32.96 C
ATOM 22 P C A 33 40.440 -26.525 6.279 1.00 42.43 P
ATOM 23 OP1 C A 33 41.148 -27.735 5.806 1.00 51.52 O
ATOM 24 OP2 C A 33 40.929 -25.800 7.473 1.00 38.66 O
ATOM 25 O5' C A 33 40.341 -25.478 5.075 1.00 39.40 O
TER
ATOM 1 O3' U B 32 38.909 -26.916 6.530 1.00 50.80 O
ATOM 2 P C B 33 40.440 -26.525 6.279 1.00 42.43 P
ATOM 3 OP1 C B 33 41.148 -27.735 5.806 1.00 51.52 O
ATOM 4 OP2 C B 33 40.929 -25.800 7.473 1.00 38.66 O
ATOM 5 O5' C B 33 40.341 -25.478 5.075 1.00 39.40 O
ATOM 6 C5' C B 33 39.758 -25.878 3.843 1.00 40.31 C
ATOM 7 C4' C B 33 39.306 -24.670 3.046 1.00 32.16 C
ATOM 8 O4' C B 33 38.311 -23.933 3.801 1.00 37.22 O
ATOM 9 C3' C B 33 40.386 -23.639 2.762 1.00 36.56 C
ATOM 10 O3' C B 33 41.157 -24.022 1.630 1.00 40.49 O
ATOM 11 C2' C B 33 39.524 -22.420 2.461 1.00 30.99 C
ATOM 12 O2' C B 33 38.968 -22.479 1.164 1.00 33.66 O
ATOM 13 C1' C B 33 38.429 -22.552 3.512 1.00 31.76 C
ATOM 14 N1 C B 33 38.729 -21.808 4.769 1.00 29.51 N
ATOM 15 C2 C B 33 38.539 -20.423 4.809 1.00 22.10 C
ATOM 16 O2 C B 33 38.126 -19.843 3.798 1.00 23.41 O
ATOM 17 N3 C B 33 38.815 -19.754 5.955 1.00 19.50 N
ATOM 18 C4 C B 33 39.261 -20.416 7.024 1.00 20.39 C
ATOM 19 N4 C B 33 39.519 -19.713 8.131 1.00 22.74 N
ATOM 20 C5 C B 33 39.461 -21.828 7.003 1.00 21.17 C
ATOM 21 C6 C B 33 39.185 -22.477 5.867 1.00 25.35 C
ATOM 22 P G B 34 42.700 -23.607 1.528 1.00 46.36 P
ATOM 23 OP1 G B 34 43.414 -24.680 0.802 1.00 63.04 O
ATOM 24 OP2 G B 34 43.147 -23.208 2.882 1.00 44.18 O
ATOM 25 O5' G B 34 42.668 -22.291 0.619 1.00 41.14 O
TER
Atoms:
C4: (36.577,-21.044,9.107)
N3: (36.046,-21.214,7.842)
OP1: (39.472,-27.579,11.804)
OP2: (39.095,-25.067,12.141)
C2: (35.833,-22.402,7.187)
C1': (36.008,-24.871,7.271)
C3': (38.065,-26.023,7.243)
O5': (38.247,-26.217,10.101)
O4': (35.979,-25.854,8.290)
C5': (37.590,-27.277,9.419)
P: (38.623,-26.379,11.645)
C4': (37.061,-26.796,8.082)
C2': (37.131,-25.261,6.313)
O2': (36.624,-26.076,5.276)
N1: (36.199,-23.528,7.894)
O4: (36.709,-19.914,9.565)
O2: (35.356,-22.443,6.067)
C6: (36.736,-23.434,9.162)
C5: (36.935,-22.265,9.781)
O3': (38.909,-26.916,6.530)
N3: (36.046,-21.214,7.842)
OP1: (39.472,-27.579,11.804)
OP2: (39.095,-25.067,12.141)
C2: (35.833,-22.402,7.187)
C1': (36.008,-24.871,7.271)
C3': (38.065,-26.023,7.243)
O5': (38.247,-26.217,10.101)
O4': (35.979,-25.854,8.290)
C5': (37.590,-27.277,9.419)
P: (38.623,-26.379,11.645)
C4': (37.061,-26.796,8.082)
C2': (37.131,-25.261,6.313)
O2': (36.624,-26.076,5.276)
N1: (36.199,-23.528,7.894)
O4: (36.709,-19.914,9.565)
O2: (35.356,-22.443,6.067)
C6: (36.736,-23.434,9.162)
C5: (36.935,-22.265,9.781)
O3': (38.909,-26.916,6.530)
C2: (38.539,-20.423,4.809)
OP1: (41.148,-27.735,5.806)
OP2: (40.929,-25.800,7.473)
C4: (39.261,-20.416,7.024)
O5': (40.341,-25.478,5.075)
C3': (40.386,-23.639,2.762)
C1': (38.429,-22.552,3.512)
O4': (38.311,-23.933,3.801)
C5': (39.758,-25.878,3.843)
P: (40.440,-26.525,6.279)
O2: (38.126,-19.843,3.798)
C4': (39.306,-24.670,3.046)
C2': (39.524,-22.420,2.461)
O2': (38.968,-22.479,1.164)
N1: (38.729,-21.808,4.769)
N3: (38.815,-19.754,5.955)
N4: (39.519,-19.713,8.131)
C6: (39.185,-22.477,5.867)
C5: (39.461,-21.828,7.003)
O3': (41.157,-24.022,1.630)
OP1: (41.148,-27.735,5.806)
OP2: (40.929,-25.800,7.473)
C4: (39.261,-20.416,7.024)
O5': (40.341,-25.478,5.075)
C3': (40.386,-23.639,2.762)
C1': (38.429,-22.552,3.512)
O4': (38.311,-23.933,3.801)
C5': (39.758,-25.878,3.843)
P: (40.440,-26.525,6.279)
O2: (38.126,-19.843,3.798)
C4': (39.306,-24.670,3.046)
C2': (39.524,-22.420,2.461)
O2': (38.968,-22.479,1.164)
N1: (38.729,-21.808,4.769)
N3: (38.815,-19.754,5.955)
N4: (39.519,-19.713,8.131)
C6: (39.185,-22.477,5.867)
C5: (39.461,-21.828,7.003)
O3': (41.157,-24.022,1.630)
Image (generated by PyMOL):