Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0543:0544
Extra
PDB:
ATOM 1 O3' G A 542 -4.548 119.536 82.198 1.00 53.45 O
ATOM 2 P U A 543 -4.678 117.942 82.052 1.00 56.03 P
ATOM 3 OP1 U A 543 -4.352 117.570 80.647 1.00 56.79 O
ATOM 4 OP2 U A 543 -5.995 117.567 82.623 1.00 57.09 O
ATOM 5 O5' U A 543 -3.526 117.376 82.997 1.00 53.64 O
ATOM 6 C5' U A 543 -3.758 117.172 84.403 1.00 54.14 C
ATOM 7 C4' U A 543 -2.987 118.184 85.223 1.00 54.55 C
ATOM 8 O4' U A 543 -3.472 119.520 84.923 1.00 55.81 O
ATOM 9 C3' U A 543 -3.178 118.046 86.723 1.00 55.04 C
ATOM 10 O3' U A 543 -2.305 117.072 87.278 1.00 55.59 O
ATOM 11 C2' U A 543 -2.905 119.455 87.233 1.00 55.89 C
ATOM 12 O2' U A 543 -1.535 119.762 87.390 1.00 56.86 O
ATOM 13 C1' U A 543 -3.484 120.308 86.104 1.00 57.25 C
ATOM 14 N1 U A 543 -4.871 120.721 86.386 1.00 60.14 N
ATOM 15 C2 U A 543 -5.089 121.624 87.426 1.00 60.33 C
ATOM 16 O2 U A 543 -4.195 122.095 88.101 1.00 59.57 O
ATOM 17 N3 U A 543 -6.402 121.944 87.649 1.00 60.97 N
ATOM 18 C4 U A 543 -7.498 121.472 86.969 1.00 62.02 C
ATOM 19 O4 U A 543 -8.617 121.848 87.301 1.00 62.78 O
ATOM 20 C5 U A 543 -7.201 120.555 85.915 1.00 62.45 C
ATOM 21 C6 U A 543 -5.932 120.222 85.661 1.00 61.75 C
ATOM 22 P C A 544 -2.833 116.105 88.449 1.00 54.12 P
ATOM 23 OP1 C A 544 -1.769 115.103 88.677 1.00 54.82 O
ATOM 24 OP2 C A 544 -4.207 115.649 88.135 1.00 53.93 O
ATOM 25 O5' C A 544 -2.934 117.059 89.718 1.00 54.22 O
TER
ATOM 1 O3' U B 543 -2.305 117.072 87.278 1.00 55.59 O
ATOM 2 P C B 544 -2.833 116.105 88.449 1.00 54.12 P
ATOM 3 OP1 C B 544 -1.769 115.103 88.677 1.00 54.82 O
ATOM 4 OP2 C B 544 -4.207 115.649 88.135 1.00 53.93 O
ATOM 5 O5' C B 544 -2.934 117.059 89.718 1.00 54.22 O
ATOM 6 C5' C B 544 -1.767 117.684 90.263 1.00 54.08 C
ATOM 7 C4' C B 544 -2.156 118.717 91.293 1.00 55.55 C
ATOM 8 O4' C B 544 -2.941 119.766 90.663 1.00 56.51 O
ATOM 9 C3' C B 544 -3.027 118.234 92.441 1.00 54.23 C
ATOM 10 O3' C B 544 -2.262 117.628 93.469 1.00 57.14 O
ATOM 11 C2' C B 544 -3.698 119.519 92.902 1.00 54.19 C
ATOM 12 O2' C B 544 -2.864 120.327 93.697 1.00 51.67 O
ATOM 13 C1' C B 544 -3.911 120.246 91.578 1.00 55.42 C
ATOM 14 N1 C B 544 -5.257 119.998 91.027 1.00 56.00 N
ATOM 15 C2 C B 544 -6.326 120.765 91.504 1.00 56.48 C
ATOM 16 O2 C B 544 -6.113 121.602 92.398 1.00 56.72 O
ATOM 17 N3 C B 544 -7.562 120.569 90.992 1.00 57.50 N
ATOM 18 C4 C B 544 -7.756 119.638 90.057 1.00 58.07 C
ATOM 19 N4 C B 544 -8.990 119.481 89.583 1.00 57.77 N
ATOM 20 C5 C B 544 -6.690 118.827 89.567 1.00 57.92 C
ATOM 21 C6 C B 544 -5.469 119.042 90.071 1.00 56.52 C
ATOM 22 P C B 545 -2.959 116.561 94.457 1.00 59.70 P
ATOM 23 OP1 C B 545 -1.872 115.920 95.237 1.00 57.47 O
ATOM 24 OP2 C B 545 -3.875 115.709 93.651 1.00 55.99 O
ATOM 25 O5' C B 545 -3.818 117.477 95.446 1.00 59.28 O
TER
ATOM 2 P U A 543 -4.678 117.942 82.052 1.00 56.03 P
ATOM 3 OP1 U A 543 -4.352 117.570 80.647 1.00 56.79 O
ATOM 4 OP2 U A 543 -5.995 117.567 82.623 1.00 57.09 O
ATOM 5 O5' U A 543 -3.526 117.376 82.997 1.00 53.64 O
ATOM 6 C5' U A 543 -3.758 117.172 84.403 1.00 54.14 C
ATOM 7 C4' U A 543 -2.987 118.184 85.223 1.00 54.55 C
ATOM 8 O4' U A 543 -3.472 119.520 84.923 1.00 55.81 O
ATOM 9 C3' U A 543 -3.178 118.046 86.723 1.00 55.04 C
ATOM 10 O3' U A 543 -2.305 117.072 87.278 1.00 55.59 O
ATOM 11 C2' U A 543 -2.905 119.455 87.233 1.00 55.89 C
ATOM 12 O2' U A 543 -1.535 119.762 87.390 1.00 56.86 O
ATOM 13 C1' U A 543 -3.484 120.308 86.104 1.00 57.25 C
ATOM 14 N1 U A 543 -4.871 120.721 86.386 1.00 60.14 N
ATOM 15 C2 U A 543 -5.089 121.624 87.426 1.00 60.33 C
ATOM 16 O2 U A 543 -4.195 122.095 88.101 1.00 59.57 O
ATOM 17 N3 U A 543 -6.402 121.944 87.649 1.00 60.97 N
ATOM 18 C4 U A 543 -7.498 121.472 86.969 1.00 62.02 C
ATOM 19 O4 U A 543 -8.617 121.848 87.301 1.00 62.78 O
ATOM 20 C5 U A 543 -7.201 120.555 85.915 1.00 62.45 C
ATOM 21 C6 U A 543 -5.932 120.222 85.661 1.00 61.75 C
ATOM 22 P C A 544 -2.833 116.105 88.449 1.00 54.12 P
ATOM 23 OP1 C A 544 -1.769 115.103 88.677 1.00 54.82 O
ATOM 24 OP2 C A 544 -4.207 115.649 88.135 1.00 53.93 O
ATOM 25 O5' C A 544 -2.934 117.059 89.718 1.00 54.22 O
TER
ATOM 1 O3' U B 543 -2.305 117.072 87.278 1.00 55.59 O
ATOM 2 P C B 544 -2.833 116.105 88.449 1.00 54.12 P
ATOM 3 OP1 C B 544 -1.769 115.103 88.677 1.00 54.82 O
ATOM 4 OP2 C B 544 -4.207 115.649 88.135 1.00 53.93 O
ATOM 5 O5' C B 544 -2.934 117.059 89.718 1.00 54.22 O
ATOM 6 C5' C B 544 -1.767 117.684 90.263 1.00 54.08 C
ATOM 7 C4' C B 544 -2.156 118.717 91.293 1.00 55.55 C
ATOM 8 O4' C B 544 -2.941 119.766 90.663 1.00 56.51 O
ATOM 9 C3' C B 544 -3.027 118.234 92.441 1.00 54.23 C
ATOM 10 O3' C B 544 -2.262 117.628 93.469 1.00 57.14 O
ATOM 11 C2' C B 544 -3.698 119.519 92.902 1.00 54.19 C
ATOM 12 O2' C B 544 -2.864 120.327 93.697 1.00 51.67 O
ATOM 13 C1' C B 544 -3.911 120.246 91.578 1.00 55.42 C
ATOM 14 N1 C B 544 -5.257 119.998 91.027 1.00 56.00 N
ATOM 15 C2 C B 544 -6.326 120.765 91.504 1.00 56.48 C
ATOM 16 O2 C B 544 -6.113 121.602 92.398 1.00 56.72 O
ATOM 17 N3 C B 544 -7.562 120.569 90.992 1.00 57.50 N
ATOM 18 C4 C B 544 -7.756 119.638 90.057 1.00 58.07 C
ATOM 19 N4 C B 544 -8.990 119.481 89.583 1.00 57.77 N
ATOM 20 C5 C B 544 -6.690 118.827 89.567 1.00 57.92 C
ATOM 21 C6 C B 544 -5.469 119.042 90.071 1.00 56.52 C
ATOM 22 P C B 545 -2.959 116.561 94.457 1.00 59.70 P
ATOM 23 OP1 C B 545 -1.872 115.920 95.237 1.00 57.47 O
ATOM 24 OP2 C B 545 -3.875 115.709 93.651 1.00 55.99 O
ATOM 25 O5' C B 545 -3.818 117.477 95.446 1.00 59.28 O
TER
Atoms:
C4: (-7.498,121.472,86.969)
N3: (-6.402,121.944,87.649)
OP1: (-4.352,117.570,80.647)
OP2: (-5.995,117.567,82.623)
C2: (-5.089,121.624,87.426)
C1': (-3.484,120.308,86.104)
C3': (-3.178,118.046,86.723)
O5': (-3.526,117.376,82.997)
O4': (-3.472,119.520,84.923)
C5': (-3.758,117.172,84.403)
P: (-4.678,117.942,82.052)
C4': (-2.987,118.184,85.223)
C2': (-2.905,119.455,87.233)
O2': (-1.535,119.762,87.390)
N1: (-4.871,120.721,86.386)
O4: (-8.617,121.848,87.301)
O2: (-4.195,122.095,88.101)
C6: (-5.932,120.222,85.661)
C5: (-7.201,120.555,85.915)
O3': (-2.305,117.072,87.278)
N3: (-6.402,121.944,87.649)
OP1: (-4.352,117.570,80.647)
OP2: (-5.995,117.567,82.623)
C2: (-5.089,121.624,87.426)
C1': (-3.484,120.308,86.104)
C3': (-3.178,118.046,86.723)
O5': (-3.526,117.376,82.997)
O4': (-3.472,119.520,84.923)
C5': (-3.758,117.172,84.403)
P: (-4.678,117.942,82.052)
C4': (-2.987,118.184,85.223)
C2': (-2.905,119.455,87.233)
O2': (-1.535,119.762,87.390)
N1: (-4.871,120.721,86.386)
O4: (-8.617,121.848,87.301)
O2: (-4.195,122.095,88.101)
C6: (-5.932,120.222,85.661)
C5: (-7.201,120.555,85.915)
O3': (-2.305,117.072,87.278)
C2: (-6.326,120.765,91.504)
OP1: (-1.769,115.103,88.677)
OP2: (-4.207,115.649,88.135)
C4: (-7.756,119.638,90.057)
O5': (-2.934,117.059,89.718)
C3': (-3.027,118.234,92.441)
C1': (-3.911,120.246,91.578)
O4': (-2.941,119.766,90.663)
C5': (-1.767,117.684,90.263)
P: (-2.833,116.105,88.449)
O2: (-6.113,121.602,92.398)
C4': (-2.156,118.717,91.293)
C2': (-3.698,119.519,92.902)
O2': (-2.864,120.327,93.697)
N1: (-5.257,119.998,91.027)
N3: (-7.562,120.569,90.992)
N4: (-8.990,119.481,89.583)
C6: (-5.469,119.042,90.071)
C5: (-6.690,118.827,89.567)
O3': (-2.262,117.628,93.469)
OP1: (-1.769,115.103,88.677)
OP2: (-4.207,115.649,88.135)
C4: (-7.756,119.638,90.057)
O5': (-2.934,117.059,89.718)
C3': (-3.027,118.234,92.441)
C1': (-3.911,120.246,91.578)
O4': (-2.941,119.766,90.663)
C5': (-1.767,117.684,90.263)
P: (-2.833,116.105,88.449)
O2: (-6.113,121.602,92.398)
C4': (-2.156,118.717,91.293)
C2': (-3.698,119.519,92.902)
O2': (-2.864,120.327,93.697)
N1: (-5.257,119.998,91.027)
N3: (-7.562,120.569,90.992)
N4: (-8.990,119.481,89.583)
C6: (-5.469,119.042,90.071)
C5: (-6.690,118.827,89.567)
O3': (-2.262,117.628,93.469)
Image (generated by PyMOL):