Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2469:A2470
Extra
PDB:
ATOM 1 O3' G A2468 101.824 114.362 99.503 1.00 44.54 O
ATOM 2 P U A2469 102.136 113.364 98.299 1.00 47.36 P
ATOM 3 OP1 U A2469 103.339 112.623 98.758 1.00 48.95 O
ATOM 4 OP2 U A2469 102.181 114.117 97.013 1.00 45.11 O
ATOM 5 O5' U A2469 100.865 112.390 98.280 1.00 46.79 O
ATOM 6 C5' U A2469 100.570 111.551 99.430 1.00 46.95 C
ATOM 7 C4' U A2469 99.224 110.861 99.301 1.00 47.07 C
ATOM 8 O4' U A2469 98.146 111.819 99.421 1.00 47.24 O
ATOM 9 C3' U A2469 98.943 110.135 97.999 1.00 46.47 C
ATOM 10 O3' U A2469 99.553 108.859 97.931 1.00 45.87 O
ATOM 11 C2' U A2469 97.423 110.070 97.995 1.00 47.35 C
ATOM 12 O2' U A2469 96.853 109.083 98.839 1.00 45.54 O
ATOM 13 C1' U A2469 97.092 111.459 98.533 1.00 47.70 C
ATOM 14 N1 U A2469 97.070 112.426 97.425 1.00 47.41 N
ATOM 15 C2 U A2469 95.919 112.518 96.672 1.00 48.14 C
ATOM 16 O2 U A2469 94.916 111.861 96.901 1.00 49.33 O
ATOM 17 N3 U A2469 95.978 113.414 95.640 1.00 48.71 N
ATOM 18 C4 U A2469 97.035 114.226 95.302 1.00 47.64 C
ATOM 19 O4 U A2469 96.892 115.060 94.408 1.00 47.32 O
ATOM 20 C5 U A2469 98.178 114.077 96.129 1.00 47.08 C
ATOM 21 C6 U A2469 98.158 113.204 97.134 1.00 47.08 C
ATOM 22 P C A2470 100.135 108.342 96.525 1.00 46.52 P
ATOM 23 OP1 C A2470 100.820 107.062 96.783 1.00 47.90 O
ATOM 24 OP2 C A2470 100.865 109.434 95.826 1.00 45.71 O
ATOM 25 O5' C A2470 98.826 108.003 95.683 1.00 47.91 O
TER
ATOM 1 O3' U B2469 99.553 108.859 97.931 1.00 45.87 O
ATOM 2 P C B2470 100.135 108.342 96.525 1.00 46.52 P
ATOM 3 OP1 C B2470 100.820 107.062 96.783 1.00 47.90 O
ATOM 4 OP2 C B2470 100.865 109.434 95.826 1.00 45.71 O
ATOM 5 O5' C B2470 98.826 108.003 95.683 1.00 47.91 O
ATOM 6 C5' C B2470 97.910 106.986 96.139 1.00 47.59 C
ATOM 7 C4' C B2470 96.686 106.948 95.267 1.00 47.92 C
ATOM 8 O4' C B2470 95.930 108.183 95.367 1.00 49.16 O
ATOM 9 C3' C B2470 97.001 106.871 93.794 1.00 47.41 C
ATOM 10 O3' C B2470 97.370 105.556 93.444 1.00 45.89 O
ATOM 11 C2' C B2470 95.693 107.327 93.170 1.00 48.24 C
ATOM 12 O2' C B2470 94.687 106.334 93.199 1.00 49.49 O
ATOM 13 C1' C B2470 95.305 108.460 94.118 1.00 49.20 C
ATOM 14 N1 C B2470 95.782 109.761 93.622 1.00 51.51 N
ATOM 15 C2 C B2470 94.998 110.463 92.700 1.00 52.75 C
ATOM 16 O2 C B2470 93.902 110.003 92.374 1.00 54.51 O
ATOM 17 N3 C B2470 95.456 111.624 92.193 1.00 53.38 N
ATOM 18 C4 C B2470 96.640 112.102 92.590 1.00 53.37 C
ATOM 19 N4 C B2470 97.059 113.254 92.064 1.00 53.47 N
ATOM 20 C5 C B2470 97.447 111.422 93.543 1.00 52.01 C
ATOM 21 C6 C B2470 96.983 110.269 94.030 1.00 51.94 C
ATOM 22 P G B2471 98.433 105.317 92.270 1.00 44.14 P
ATOM 23 OP1 G B2471 98.569 103.853 92.238 1.00 43.06 O
ATOM 24 OP2 G B2471 99.647 106.180 92.421 1.00 43.61 O
ATOM 25 O5' G B2471 97.645 105.775 90.970 1.00 44.65 O
TER
ATOM 2 P U A2469 102.136 113.364 98.299 1.00 47.36 P
ATOM 3 OP1 U A2469 103.339 112.623 98.758 1.00 48.95 O
ATOM 4 OP2 U A2469 102.181 114.117 97.013 1.00 45.11 O
ATOM 5 O5' U A2469 100.865 112.390 98.280 1.00 46.79 O
ATOM 6 C5' U A2469 100.570 111.551 99.430 1.00 46.95 C
ATOM 7 C4' U A2469 99.224 110.861 99.301 1.00 47.07 C
ATOM 8 O4' U A2469 98.146 111.819 99.421 1.00 47.24 O
ATOM 9 C3' U A2469 98.943 110.135 97.999 1.00 46.47 C
ATOM 10 O3' U A2469 99.553 108.859 97.931 1.00 45.87 O
ATOM 11 C2' U A2469 97.423 110.070 97.995 1.00 47.35 C
ATOM 12 O2' U A2469 96.853 109.083 98.839 1.00 45.54 O
ATOM 13 C1' U A2469 97.092 111.459 98.533 1.00 47.70 C
ATOM 14 N1 U A2469 97.070 112.426 97.425 1.00 47.41 N
ATOM 15 C2 U A2469 95.919 112.518 96.672 1.00 48.14 C
ATOM 16 O2 U A2469 94.916 111.861 96.901 1.00 49.33 O
ATOM 17 N3 U A2469 95.978 113.414 95.640 1.00 48.71 N
ATOM 18 C4 U A2469 97.035 114.226 95.302 1.00 47.64 C
ATOM 19 O4 U A2469 96.892 115.060 94.408 1.00 47.32 O
ATOM 20 C5 U A2469 98.178 114.077 96.129 1.00 47.08 C
ATOM 21 C6 U A2469 98.158 113.204 97.134 1.00 47.08 C
ATOM 22 P C A2470 100.135 108.342 96.525 1.00 46.52 P
ATOM 23 OP1 C A2470 100.820 107.062 96.783 1.00 47.90 O
ATOM 24 OP2 C A2470 100.865 109.434 95.826 1.00 45.71 O
ATOM 25 O5' C A2470 98.826 108.003 95.683 1.00 47.91 O
TER
ATOM 1 O3' U B2469 99.553 108.859 97.931 1.00 45.87 O
ATOM 2 P C B2470 100.135 108.342 96.525 1.00 46.52 P
ATOM 3 OP1 C B2470 100.820 107.062 96.783 1.00 47.90 O
ATOM 4 OP2 C B2470 100.865 109.434 95.826 1.00 45.71 O
ATOM 5 O5' C B2470 98.826 108.003 95.683 1.00 47.91 O
ATOM 6 C5' C B2470 97.910 106.986 96.139 1.00 47.59 C
ATOM 7 C4' C B2470 96.686 106.948 95.267 1.00 47.92 C
ATOM 8 O4' C B2470 95.930 108.183 95.367 1.00 49.16 O
ATOM 9 C3' C B2470 97.001 106.871 93.794 1.00 47.41 C
ATOM 10 O3' C B2470 97.370 105.556 93.444 1.00 45.89 O
ATOM 11 C2' C B2470 95.693 107.327 93.170 1.00 48.24 C
ATOM 12 O2' C B2470 94.687 106.334 93.199 1.00 49.49 O
ATOM 13 C1' C B2470 95.305 108.460 94.118 1.00 49.20 C
ATOM 14 N1 C B2470 95.782 109.761 93.622 1.00 51.51 N
ATOM 15 C2 C B2470 94.998 110.463 92.700 1.00 52.75 C
ATOM 16 O2 C B2470 93.902 110.003 92.374 1.00 54.51 O
ATOM 17 N3 C B2470 95.456 111.624 92.193 1.00 53.38 N
ATOM 18 C4 C B2470 96.640 112.102 92.590 1.00 53.37 C
ATOM 19 N4 C B2470 97.059 113.254 92.064 1.00 53.47 N
ATOM 20 C5 C B2470 97.447 111.422 93.543 1.00 52.01 C
ATOM 21 C6 C B2470 96.983 110.269 94.030 1.00 51.94 C
ATOM 22 P G B2471 98.433 105.317 92.270 1.00 44.14 P
ATOM 23 OP1 G B2471 98.569 103.853 92.238 1.00 43.06 O
ATOM 24 OP2 G B2471 99.647 106.180 92.421 1.00 43.61 O
ATOM 25 O5' G B2471 97.645 105.775 90.970 1.00 44.65 O
TER
Atoms:
C4: (97.035,114.226,95.302)
N3: (95.978,113.414,95.640)
OP1: (103.339,112.623,98.758)
OP2: (102.181,114.117,97.013)
C2: (95.919,112.518,96.672)
C1': (97.092,111.459,98.533)
C3': (98.943,110.135,97.999)
O5': (100.865,112.390,98.280)
O4': (98.146,111.819,99.421)
C5': (100.570,111.551,99.430)
P: (102.136,113.364,98.299)
C4': (99.224,110.861,99.301)
C2': (97.423,110.070,97.995)
O2': (96.853,109.083,98.839)
N1: (97.070,112.426,97.425)
O4: (96.892,115.060,94.408)
O2: (94.916,111.861,96.901)
C6: (98.158,113.204,97.134)
C5: (98.178,114.077,96.129)
O3': (99.553,108.859,97.931)
N3: (95.978,113.414,95.640)
OP1: (103.339,112.623,98.758)
OP2: (102.181,114.117,97.013)
C2: (95.919,112.518,96.672)
C1': (97.092,111.459,98.533)
C3': (98.943,110.135,97.999)
O5': (100.865,112.390,98.280)
O4': (98.146,111.819,99.421)
C5': (100.570,111.551,99.430)
P: (102.136,113.364,98.299)
C4': (99.224,110.861,99.301)
C2': (97.423,110.070,97.995)
O2': (96.853,109.083,98.839)
N1: (97.070,112.426,97.425)
O4: (96.892,115.060,94.408)
O2: (94.916,111.861,96.901)
C6: (98.158,113.204,97.134)
C5: (98.178,114.077,96.129)
O3': (99.553,108.859,97.931)
C2: (94.998,110.463,92.700)
OP1: (100.820,107.062,96.783)
OP2: (100.865,109.434,95.826)
C4: (96.640,112.102,92.590)
O5': (98.826,108.003,95.683)
C3': (97.001,106.871,93.794)
C1': (95.305,108.460,94.118)
O4': (95.930,108.183,95.367)
C5': (97.910,106.986,96.139)
P: (100.135,108.342,96.525)
O2: (93.902,110.003,92.374)
C4': (96.686,106.948,95.267)
C2': (95.693,107.327,93.170)
O2': (94.687,106.334,93.199)
N1: (95.782,109.761,93.622)
N3: (95.456,111.624,92.193)
N4: (97.059,113.254,92.064)
C6: (96.983,110.269,94.030)
C5: (97.447,111.422,93.543)
O3': (97.370,105.556,93.444)
OP1: (100.820,107.062,96.783)
OP2: (100.865,109.434,95.826)
C4: (96.640,112.102,92.590)
O5': (98.826,108.003,95.683)
C3': (97.001,106.871,93.794)
C1': (95.305,108.460,94.118)
O4': (95.930,108.183,95.367)
C5': (97.910,106.986,96.139)
P: (100.135,108.342,96.525)
O2: (93.902,110.003,92.374)
C4': (96.686,106.948,95.267)
C2': (95.693,107.327,93.170)
O2': (94.687,106.334,93.199)
N1: (95.782,109.761,93.622)
N3: (95.456,111.624,92.193)
N4: (97.059,113.254,92.064)
C6: (96.983,110.269,94.030)
C5: (97.447,111.422,93.543)
O3': (97.370,105.556,93.444)
Image (generated by PyMOL):