Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW5:A3:A4
Extra
PDB:
ATOM 1 O3' C A 2 -22.061 48.915 -19.485 0.45 9.77 O
ATOM 2 C4' U A 3 -18.235 51.498 -20.965 1.00 12.98 C
ATOM 3 O4' U A 3 -18.884 52.604 -20.291 1.00 13.13 O
ATOM 4 C3' U A 3 -16.768 51.834 -20.785 1.00 12.70 C
ATOM 5 O3' U A 3 -16.012 51.159 -21.748 1.00 13.84 O
ATOM 6 C2' U A 3 -16.759 53.328 -21.043 1.00 13.39 C
ATOM 7 O2' U A 3 -16.973 53.624 -22.409 1.00 15.51 O
ATOM 8 C1' U A 3 -17.994 53.715 -20.249 1.00 12.81 C
ATOM 9 N1 U A 3 -17.766 54.130 -18.826 1.00 11.08 N
ATOM 10 C2 U A 3 -17.178 55.352 -18.564 1.00 10.74 C
ATOM 11 O2 U A 3 -16.796 56.110 -19.438 1.00 11.03 O
ATOM 12 N3 U A 3 -17.042 55.656 -17.231 1.00 10.65 N
ATOM 13 C4 U A 3 -17.432 54.875 -16.158 1.00 10.69 C
ATOM 14 O4 U A 3 -17.255 55.277 -15.013 1.00 11.26 O
ATOM 15 C5 U A 3 -18.036 53.618 -16.513 1.00 11.48 C
ATOM 16 C6 U A 3 -18.183 53.303 -17.805 1.00 11.73 C
ATOM 17 P U A 3 -20.540 48.436 -19.612 0.46 10.04 P
ATOM 18 OP1 U A 3 -20.540 47.234 -20.479 0.59 11.31 O
ATOM 19 OP2 U A 3 -19.936 48.374 -18.260 0.44 12.40 O
ATOM 20 O5' U A 3 -19.922 49.694 -20.421 0.41 11.59 O
ATOM 21 C5' U A 3 -18.570 50.173 -20.269 0.52 13.07 C
ATOM 22 P C A 4 -14.562 50.626 -21.356 1.00 14.31 P
ATOM 23 OP1 C A 4 -14.075 49.822 -22.497 1.00 16.45 O
ATOM 24 OP2 C A 4 -14.643 50.021 -20.010 1.00 16.54 O
ATOM 25 O5' C A 4 -13.682 51.954 -21.247 1.00 11.56 O
TER
ATOM 1 O3' U B 3 -16.012 51.159 -21.748 1.00 13.84 O
ATOM 2 P C B 4 -14.562 50.626 -21.356 1.00 14.31 P
ATOM 3 OP1 C B 4 -14.075 49.822 -22.497 1.00 16.45 O
ATOM 4 OP2 C B 4 -14.643 50.021 -20.010 1.00 16.54 O
ATOM 5 O5' C B 4 -13.682 51.954 -21.247 1.00 11.56 O
ATOM 6 C5' C B 4 -13.444 52.747 -22.400 1.00 9.87 C
ATOM 7 C4' C B 4 -12.919 54.102 -21.978 1.00 9.49 C
ATOM 8 O4' C B 4 -13.888 54.720 -21.101 1.00 9.25 O
ATOM 9 C3' C B 4 -11.651 54.061 -21.139 1.00 9.42 C
ATOM 10 O3' C B 4 -10.501 53.932 -21.958 1.00 9.50 O
ATOM 11 C2' C B 4 -11.710 55.416 -20.448 1.00 9.62 C
ATOM 12 O2' C B 4 -11.329 56.493 -21.280 1.00 10.57 O
ATOM 13 C1' C B 4 -13.198 55.501 -20.145 1.00 9.09 C
ATOM 14 N1 C B 4 -13.538 55.044 -18.774 1.00 8.62 N
ATOM 15 C2 C B 4 -13.257 55.935 -17.745 1.00 8.33 C
ATOM 16 O2 C B 4 -12.744 57.021 -18.042 1.00 8.57 O
ATOM 17 N3 C B 4 -13.550 55.589 -16.469 1.00 8.09 N
ATOM 18 C4 C B 4 -14.099 54.403 -16.210 1.00 8.61 C
ATOM 19 N4 C B 4 -14.375 54.107 -14.935 1.00 9.14 N
ATOM 20 C5 C B 4 -14.385 53.469 -17.253 1.00 9.21 C
ATOM 21 C6 C B 4 -14.092 53.824 -18.513 1.00 8.84 C
ATOM 22 P C B 5 -9.167 53.310 -21.329 1.00 9.37 P
ATOM 23 OP1 C B 5 -8.221 53.111 -22.448 1.00 10.65 O
ATOM 24 OP2 C B 5 -9.528 52.164 -20.467 1.00 10.92 O
ATOM 25 O5' C B 5 -8.620 54.463 -20.370 1.00 8.33 O
TER
ATOM 2 C4' U A 3 -18.235 51.498 -20.965 1.00 12.98 C
ATOM 3 O4' U A 3 -18.884 52.604 -20.291 1.00 13.13 O
ATOM 4 C3' U A 3 -16.768 51.834 -20.785 1.00 12.70 C
ATOM 5 O3' U A 3 -16.012 51.159 -21.748 1.00 13.84 O
ATOM 6 C2' U A 3 -16.759 53.328 -21.043 1.00 13.39 C
ATOM 7 O2' U A 3 -16.973 53.624 -22.409 1.00 15.51 O
ATOM 8 C1' U A 3 -17.994 53.715 -20.249 1.00 12.81 C
ATOM 9 N1 U A 3 -17.766 54.130 -18.826 1.00 11.08 N
ATOM 10 C2 U A 3 -17.178 55.352 -18.564 1.00 10.74 C
ATOM 11 O2 U A 3 -16.796 56.110 -19.438 1.00 11.03 O
ATOM 12 N3 U A 3 -17.042 55.656 -17.231 1.00 10.65 N
ATOM 13 C4 U A 3 -17.432 54.875 -16.158 1.00 10.69 C
ATOM 14 O4 U A 3 -17.255 55.277 -15.013 1.00 11.26 O
ATOM 15 C5 U A 3 -18.036 53.618 -16.513 1.00 11.48 C
ATOM 16 C6 U A 3 -18.183 53.303 -17.805 1.00 11.73 C
ATOM 17 P U A 3 -20.540 48.436 -19.612 0.46 10.04 P
ATOM 18 OP1 U A 3 -20.540 47.234 -20.479 0.59 11.31 O
ATOM 19 OP2 U A 3 -19.936 48.374 -18.260 0.44 12.40 O
ATOM 20 O5' U A 3 -19.922 49.694 -20.421 0.41 11.59 O
ATOM 21 C5' U A 3 -18.570 50.173 -20.269 0.52 13.07 C
ATOM 22 P C A 4 -14.562 50.626 -21.356 1.00 14.31 P
ATOM 23 OP1 C A 4 -14.075 49.822 -22.497 1.00 16.45 O
ATOM 24 OP2 C A 4 -14.643 50.021 -20.010 1.00 16.54 O
ATOM 25 O5' C A 4 -13.682 51.954 -21.247 1.00 11.56 O
TER
ATOM 1 O3' U B 3 -16.012 51.159 -21.748 1.00 13.84 O
ATOM 2 P C B 4 -14.562 50.626 -21.356 1.00 14.31 P
ATOM 3 OP1 C B 4 -14.075 49.822 -22.497 1.00 16.45 O
ATOM 4 OP2 C B 4 -14.643 50.021 -20.010 1.00 16.54 O
ATOM 5 O5' C B 4 -13.682 51.954 -21.247 1.00 11.56 O
ATOM 6 C5' C B 4 -13.444 52.747 -22.400 1.00 9.87 C
ATOM 7 C4' C B 4 -12.919 54.102 -21.978 1.00 9.49 C
ATOM 8 O4' C B 4 -13.888 54.720 -21.101 1.00 9.25 O
ATOM 9 C3' C B 4 -11.651 54.061 -21.139 1.00 9.42 C
ATOM 10 O3' C B 4 -10.501 53.932 -21.958 1.00 9.50 O
ATOM 11 C2' C B 4 -11.710 55.416 -20.448 1.00 9.62 C
ATOM 12 O2' C B 4 -11.329 56.493 -21.280 1.00 10.57 O
ATOM 13 C1' C B 4 -13.198 55.501 -20.145 1.00 9.09 C
ATOM 14 N1 C B 4 -13.538 55.044 -18.774 1.00 8.62 N
ATOM 15 C2 C B 4 -13.257 55.935 -17.745 1.00 8.33 C
ATOM 16 O2 C B 4 -12.744 57.021 -18.042 1.00 8.57 O
ATOM 17 N3 C B 4 -13.550 55.589 -16.469 1.00 8.09 N
ATOM 18 C4 C B 4 -14.099 54.403 -16.210 1.00 8.61 C
ATOM 19 N4 C B 4 -14.375 54.107 -14.935 1.00 9.14 N
ATOM 20 C5 C B 4 -14.385 53.469 -17.253 1.00 9.21 C
ATOM 21 C6 C B 4 -14.092 53.824 -18.513 1.00 8.84 C
ATOM 22 P C B 5 -9.167 53.310 -21.329 1.00 9.37 P
ATOM 23 OP1 C B 5 -8.221 53.111 -22.448 1.00 10.65 O
ATOM 24 OP2 C B 5 -9.528 52.164 -20.467 1.00 10.92 O
ATOM 25 O5' C B 5 -8.620 54.463 -20.370 1.00 8.33 O
TER
Atoms:
C4: (-17.432,54.875,-16.158)
N3: (-17.042,55.656,-17.231)
OP1: (-20.540,47.234,-20.479)
OP2: (-19.936,48.374,-18.260)
C2: (-17.178,55.352,-18.564)
C1': (-17.994,53.715,-20.249)
C3': (-16.768,51.834,-20.785)
O5': (-19.922,49.694,-20.421)
O4': (-18.884,52.604,-20.291)
C5': (-18.570,50.173,-20.269)
P: (-20.540,48.436,-19.612)
C4': (-18.235,51.498,-20.965)
C2': (-16.759,53.328,-21.043)
O2': (-16.973,53.624,-22.409)
N1: (-17.766,54.130,-18.826)
O4: (-17.255,55.277,-15.013)
O2: (-16.796,56.110,-19.438)
C6: (-18.183,53.303,-17.805)
C5: (-18.036,53.618,-16.513)
O3': (-16.012,51.159,-21.748)
N3: (-17.042,55.656,-17.231)
OP1: (-20.540,47.234,-20.479)
OP2: (-19.936,48.374,-18.260)
C2: (-17.178,55.352,-18.564)
C1': (-17.994,53.715,-20.249)
C3': (-16.768,51.834,-20.785)
O5': (-19.922,49.694,-20.421)
O4': (-18.884,52.604,-20.291)
C5': (-18.570,50.173,-20.269)
P: (-20.540,48.436,-19.612)
C4': (-18.235,51.498,-20.965)
C2': (-16.759,53.328,-21.043)
O2': (-16.973,53.624,-22.409)
N1: (-17.766,54.130,-18.826)
O4: (-17.255,55.277,-15.013)
O2: (-16.796,56.110,-19.438)
C6: (-18.183,53.303,-17.805)
C5: (-18.036,53.618,-16.513)
O3': (-16.012,51.159,-21.748)
C2: (-13.257,55.935,-17.745)
OP1: (-14.075,49.822,-22.497)
OP2: (-14.643,50.021,-20.010)
C4: (-14.099,54.403,-16.210)
O5': (-13.682,51.954,-21.247)
C3': (-11.651,54.061,-21.139)
C1': (-13.198,55.501,-20.145)
O4': (-13.888,54.720,-21.101)
C5': (-13.444,52.747,-22.400)
P: (-14.562,50.626,-21.356)
O2: (-12.744,57.021,-18.042)
C4': (-12.919,54.102,-21.978)
C2': (-11.710,55.416,-20.448)
O2': (-11.329,56.493,-21.280)
N1: (-13.538,55.044,-18.774)
N3: (-13.550,55.589,-16.469)
N4: (-14.375,54.107,-14.935)
C6: (-14.092,53.824,-18.513)
C5: (-14.385,53.469,-17.253)
O3': (-10.501,53.932,-21.958)
OP1: (-14.075,49.822,-22.497)
OP2: (-14.643,50.021,-20.010)
C4: (-14.099,54.403,-16.210)
O5': (-13.682,51.954,-21.247)
C3': (-11.651,54.061,-21.139)
C1': (-13.198,55.501,-20.145)
O4': (-13.888,54.720,-21.101)
C5': (-13.444,52.747,-22.400)
P: (-14.562,50.626,-21.356)
O2: (-12.744,57.021,-18.042)
C4': (-12.919,54.102,-21.978)
C2': (-11.710,55.416,-20.448)
O2': (-11.329,56.493,-21.280)
N1: (-13.538,55.044,-18.774)
N3: (-13.550,55.589,-16.469)
N4: (-14.375,54.107,-14.935)
C6: (-14.092,53.824,-18.513)
C5: (-14.385,53.469,-17.253)
O3': (-10.501,53.932,-21.958)
Image (generated by PyMOL):