Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01873:01874
Extra
PDB:
ATOM 1 O3' C A1872 111.841 79.637 38.728 1.00 84.83 O
ATOM 2 P U A1873 110.562 78.897 38.094 1.00 84.66 P
ATOM 3 OP1 U A1873 111.017 77.957 37.039 1.00 84.99 O
ATOM 4 OP2 U A1873 109.562 79.945 37.752 1.00 83.57 O
ATOM 5 O5' U A1873 110.006 78.032 39.310 1.00 84.78 O
ATOM 6 C5' U A1873 110.836 77.040 39.947 1.00 84.79 C
ATOM 7 C4' U A1873 110.066 76.323 41.031 1.00 85.08 C
ATOM 8 O4' U A1873 109.825 77.222 42.147 1.00 86.09 O
ATOM 9 C3' U A1873 108.678 75.851 40.639 1.00 85.37 C
ATOM 10 O3' U A1873 108.681 74.647 39.881 1.00 83.10 O
ATOM 11 C2' U A1873 107.995 75.712 41.992 1.00 86.62 C
ATOM 12 O2' U A1873 108.340 74.526 42.677 1.00 86.45 O
ATOM 13 C1' U A1873 108.562 76.925 42.735 1.00 87.73 C
ATOM 14 N1 U A1873 107.690 78.111 42.630 1.00 90.07 N
ATOM 15 C2 U A1873 106.521 78.134 43.396 1.00 91.59 C
ATOM 16 O2 U A1873 106.199 77.233 44.159 1.00 93.14 O
ATOM 17 N3 U A1873 105.744 79.255 43.233 1.00 91.51 N
ATOM 18 C4 U A1873 105.999 80.334 42.414 1.00 91.89 C
ATOM 19 O4 U A1873 105.192 81.264 42.372 1.00 91.84 O
ATOM 20 C5 U A1873 107.218 80.244 41.669 1.00 91.30 C
ATOM 21 C6 U A1873 108.001 79.166 41.799 1.00 90.22 C
ATOM 22 P C A1874 107.427 74.307 38.935 1.00 82.16 P
ATOM 23 OP1 C A1874 107.676 73.000 38.284 1.00 82.31 O
ATOM 24 OP2 C A1874 107.154 75.500 38.096 1.00 82.20 O
ATOM 25 O5' C A1874 106.217 74.122 39.958 1.00 81.12 O
TER
ATOM 1 O3' U B1873 108.681 74.647 39.881 1.00 83.10 O
ATOM 2 P C B1874 107.427 74.307 38.935 1.00 82.16 P
ATOM 3 OP1 C B1874 107.676 73.000 38.284 1.00 82.31 O
ATOM 4 OP2 C B1874 107.154 75.500 38.096 1.00 82.20 O
ATOM 5 O5' C B1874 106.217 74.122 39.958 1.00 81.12 O
ATOM 6 C5' C B1874 106.236 73.070 40.943 1.00 80.33 C
ATOM 7 C4' C B1874 104.966 73.087 41.761 1.00 81.06 C
ATOM 8 O4' C B1874 104.931 74.267 42.611 1.00 82.03 O
ATOM 9 C3' C B1874 103.671 73.165 40.969 1.00 80.85 C
ATOM 10 O3' C B1874 103.274 71.903 40.441 1.00 79.57 O
ATOM 11 C2' C B1874 102.693 73.713 42.002 1.00 81.14 C
ATOM 12 O2' C B1874 102.215 72.737 42.898 1.00 80.63 O
ATOM 13 C1' C B1874 103.583 74.703 42.760 1.00 82.54 C
ATOM 14 N1 C B1874 103.455 76.079 42.233 1.00 84.05 N
ATOM 15 C2 C B1874 102.478 76.924 42.783 1.00 84.20 C
ATOM 16 O2 C B1874 101.768 76.505 43.715 1.00 84.62 O
ATOM 17 N3 C B1874 102.335 78.172 42.287 1.00 83.74 N
ATOM 18 C4 C B1874 103.115 78.588 41.291 1.00 83.53 C
ATOM 19 N4 C B1874 102.928 79.821 40.828 1.00 85.07 N
ATOM 20 C5 C B1874 104.121 77.759 40.724 1.00 83.44 C
ATOM 21 C6 C B1874 104.258 76.526 41.219 1.00 83.38 C
ATOM 22 P G B1875 102.583 71.834 38.992 1.00 78.19 P
ATOM 23 OP1 G B1875 102.243 70.417 38.702 1.00 77.09 O
ATOM 24 OP2 G B1875 103.434 72.596 38.044 1.00 77.70 O
ATOM 25 O5' G B1875 101.223 72.632 39.188 1.00 78.59 O
TER
ATOM 2 P U A1873 110.562 78.897 38.094 1.00 84.66 P
ATOM 3 OP1 U A1873 111.017 77.957 37.039 1.00 84.99 O
ATOM 4 OP2 U A1873 109.562 79.945 37.752 1.00 83.57 O
ATOM 5 O5' U A1873 110.006 78.032 39.310 1.00 84.78 O
ATOM 6 C5' U A1873 110.836 77.040 39.947 1.00 84.79 C
ATOM 7 C4' U A1873 110.066 76.323 41.031 1.00 85.08 C
ATOM 8 O4' U A1873 109.825 77.222 42.147 1.00 86.09 O
ATOM 9 C3' U A1873 108.678 75.851 40.639 1.00 85.37 C
ATOM 10 O3' U A1873 108.681 74.647 39.881 1.00 83.10 O
ATOM 11 C2' U A1873 107.995 75.712 41.992 1.00 86.62 C
ATOM 12 O2' U A1873 108.340 74.526 42.677 1.00 86.45 O
ATOM 13 C1' U A1873 108.562 76.925 42.735 1.00 87.73 C
ATOM 14 N1 U A1873 107.690 78.111 42.630 1.00 90.07 N
ATOM 15 C2 U A1873 106.521 78.134 43.396 1.00 91.59 C
ATOM 16 O2 U A1873 106.199 77.233 44.159 1.00 93.14 O
ATOM 17 N3 U A1873 105.744 79.255 43.233 1.00 91.51 N
ATOM 18 C4 U A1873 105.999 80.334 42.414 1.00 91.89 C
ATOM 19 O4 U A1873 105.192 81.264 42.372 1.00 91.84 O
ATOM 20 C5 U A1873 107.218 80.244 41.669 1.00 91.30 C
ATOM 21 C6 U A1873 108.001 79.166 41.799 1.00 90.22 C
ATOM 22 P C A1874 107.427 74.307 38.935 1.00 82.16 P
ATOM 23 OP1 C A1874 107.676 73.000 38.284 1.00 82.31 O
ATOM 24 OP2 C A1874 107.154 75.500 38.096 1.00 82.20 O
ATOM 25 O5' C A1874 106.217 74.122 39.958 1.00 81.12 O
TER
ATOM 1 O3' U B1873 108.681 74.647 39.881 1.00 83.10 O
ATOM 2 P C B1874 107.427 74.307 38.935 1.00 82.16 P
ATOM 3 OP1 C B1874 107.676 73.000 38.284 1.00 82.31 O
ATOM 4 OP2 C B1874 107.154 75.500 38.096 1.00 82.20 O
ATOM 5 O5' C B1874 106.217 74.122 39.958 1.00 81.12 O
ATOM 6 C5' C B1874 106.236 73.070 40.943 1.00 80.33 C
ATOM 7 C4' C B1874 104.966 73.087 41.761 1.00 81.06 C
ATOM 8 O4' C B1874 104.931 74.267 42.611 1.00 82.03 O
ATOM 9 C3' C B1874 103.671 73.165 40.969 1.00 80.85 C
ATOM 10 O3' C B1874 103.274 71.903 40.441 1.00 79.57 O
ATOM 11 C2' C B1874 102.693 73.713 42.002 1.00 81.14 C
ATOM 12 O2' C B1874 102.215 72.737 42.898 1.00 80.63 O
ATOM 13 C1' C B1874 103.583 74.703 42.760 1.00 82.54 C
ATOM 14 N1 C B1874 103.455 76.079 42.233 1.00 84.05 N
ATOM 15 C2 C B1874 102.478 76.924 42.783 1.00 84.20 C
ATOM 16 O2 C B1874 101.768 76.505 43.715 1.00 84.62 O
ATOM 17 N3 C B1874 102.335 78.172 42.287 1.00 83.74 N
ATOM 18 C4 C B1874 103.115 78.588 41.291 1.00 83.53 C
ATOM 19 N4 C B1874 102.928 79.821 40.828 1.00 85.07 N
ATOM 20 C5 C B1874 104.121 77.759 40.724 1.00 83.44 C
ATOM 21 C6 C B1874 104.258 76.526 41.219 1.00 83.38 C
ATOM 22 P G B1875 102.583 71.834 38.992 1.00 78.19 P
ATOM 23 OP1 G B1875 102.243 70.417 38.702 1.00 77.09 O
ATOM 24 OP2 G B1875 103.434 72.596 38.044 1.00 77.70 O
ATOM 25 O5' G B1875 101.223 72.632 39.188 1.00 78.59 O
TER
Atoms:
C4: (105.999,80.334,42.414)
N3: (105.744,79.255,43.233)
OP1: (111.017,77.957,37.039)
OP2: (109.562,79.945,37.752)
C2: (106.521,78.134,43.396)
C1': (108.562,76.925,42.735)
C3': (108.678,75.851,40.639)
O5': (110.006,78.032,39.310)
O4': (109.825,77.222,42.147)
C5': (110.836,77.040,39.947)
P: (110.562,78.897,38.094)
C4': (110.066,76.323,41.031)
C2': (107.995,75.712,41.992)
O2': (108.340,74.526,42.677)
N1: (107.690,78.111,42.630)
O4: (105.192,81.264,42.372)
O2: (106.199,77.233,44.159)
C6: (108.001,79.166,41.799)
C5: (107.218,80.244,41.669)
O3': (108.681,74.647,39.881)
N3: (105.744,79.255,43.233)
OP1: (111.017,77.957,37.039)
OP2: (109.562,79.945,37.752)
C2: (106.521,78.134,43.396)
C1': (108.562,76.925,42.735)
C3': (108.678,75.851,40.639)
O5': (110.006,78.032,39.310)
O4': (109.825,77.222,42.147)
C5': (110.836,77.040,39.947)
P: (110.562,78.897,38.094)
C4': (110.066,76.323,41.031)
C2': (107.995,75.712,41.992)
O2': (108.340,74.526,42.677)
N1: (107.690,78.111,42.630)
O4: (105.192,81.264,42.372)
O2: (106.199,77.233,44.159)
C6: (108.001,79.166,41.799)
C5: (107.218,80.244,41.669)
O3': (108.681,74.647,39.881)
C2: (102.478,76.924,42.783)
OP1: (107.676,73.000,38.284)
OP2: (107.154,75.500,38.096)
C4: (103.115,78.588,41.291)
O5': (106.217,74.122,39.958)
C3': (103.671,73.165,40.969)
C1': (103.583,74.703,42.760)
O4': (104.931,74.267,42.611)
C5': (106.236,73.070,40.943)
P: (107.427,74.307,38.935)
O2: (101.768,76.505,43.715)
C4': (104.966,73.087,41.761)
C2': (102.693,73.713,42.002)
O2': (102.215,72.737,42.898)
N1: (103.455,76.079,42.233)
N3: (102.335,78.172,42.287)
N4: (102.928,79.821,40.828)
C6: (104.258,76.526,41.219)
C5: (104.121,77.759,40.724)
O3': (103.274,71.903,40.441)
OP1: (107.676,73.000,38.284)
OP2: (107.154,75.500,38.096)
C4: (103.115,78.588,41.291)
O5': (106.217,74.122,39.958)
C3': (103.671,73.165,40.969)
C1': (103.583,74.703,42.760)
O4': (104.931,74.267,42.611)
C5': (106.236,73.070,40.943)
P: (107.427,74.307,38.935)
O2: (101.768,76.505,43.715)
C4': (104.966,73.087,41.761)
C2': (102.693,73.713,42.002)
O2': (102.215,72.737,42.898)
N1: (103.455,76.079,42.233)
N3: (102.335,78.172,42.287)
N4: (102.928,79.821,40.828)
C6: (104.258,76.526,41.219)
C5: (104.121,77.759,40.724)
O3': (103.274,71.903,40.441)
Image (generated by PyMOL):