Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A96:A97
Extra
PDB:
ATOM 1 O3' C A 95 -10.712 41.094 10.460 1.00 32.01 O
ATOM 2 P U A 96 -9.554 39.992 10.321 1.00 32.56 P
ATOM 3 OP1 U A 96 -9.816 38.920 11.306 1.00 33.14 O
ATOM 4 OP2 U A 96 -8.247 40.684 10.348 1.00 32.49 O
ATOM 5 O5' U A 96 -9.776 39.415 8.841 1.00 32.98 O
ATOM 6 C5' U A 96 -11.021 38.829 8.442 1.00 33.51 C
ATOM 7 C4' U A 96 -11.074 38.556 6.946 1.00 33.92 C
ATOM 8 O4' U A 96 -11.139 39.805 6.211 1.00 34.06 O
ATOM 9 C3' U A 96 -9.850 37.865 6.360 1.00 34.02 C
ATOM 10 O3' U A 96 -9.875 36.456 6.542 1.00 34.47 O
ATOM 11 C2' U A 96 -9.908 38.277 4.893 1.00 33.76 C
ATOM 12 O2' U A 96 -10.850 37.546 4.136 1.00 33.87 O
ATOM 13 C1' U A 96 -10.367 39.719 5.021 1.00 33.79 C
ATOM 14 N1 U A 96 -9.240 40.729 5.026 1.00 33.95 N
ATOM 15 C2 U A 96 -8.693 41.149 3.821 1.00 33.58 C
ATOM 16 O2 U A 96 -9.058 40.746 2.733 1.00 33.40 O
ATOM 17 N3 U A 96 -7.683 42.077 3.932 1.00 33.34 N
ATOM 18 C4 U A 96 -7.171 42.621 5.099 1.00 33.18 C
ATOM 19 O4 U A 96 -6.263 43.443 5.044 1.00 33.37 O
ATOM 20 C5 U A 96 -7.784 42.141 6.312 1.00 33.53 C
ATOM 21 C6 U A 96 -8.770 41.236 6.229 1.00 33.82 C
ATOM 22 P C A 97 -8.469 35.711 6.715 1.00 35.42 P
ATOM 23 OP1 C A 97 -8.723 34.305 7.108 1.00 35.67 O
ATOM 24 OP2 C A 97 -7.589 36.557 7.558 1.00 35.54 O
ATOM 25 O5' C A 97 -7.879 35.753 5.226 1.00 35.99 O
TER
ATOM 1 O3' U B 96 -9.875 36.456 6.542 1.00 34.47 O
ATOM 2 P C B 97 -8.469 35.711 6.715 1.00 35.42 P
ATOM 3 OP1 C B 97 -8.723 34.305 7.108 1.00 35.67 O
ATOM 4 OP2 C B 97 -7.589 36.557 7.558 1.00 35.54 O
ATOM 5 O5' C B 97 -7.879 35.753 5.226 1.00 35.99 O
ATOM 6 C5' C B 97 -8.484 34.993 4.179 1.00 36.27 C
ATOM 7 C4' C B 97 -7.759 35.197 2.860 1.00 36.74 C
ATOM 8 O4' C B 97 -7.876 36.582 2.444 1.00 36.70 O
ATOM 9 C3' C B 97 -6.255 34.960 2.886 1.00 36.88 C
ATOM 10 O3' C B 97 -5.925 33.580 2.820 1.00 37.22 O
ATOM 11 C2' C B 97 -5.838 35.718 1.633 1.00 36.83 C
ATOM 12 O2' C B 97 -6.150 35.023 0.445 1.00 37.37 O
ATOM 13 C1' C B 97 -6.701 36.968 1.753 1.00 36.38 C
ATOM 14 N1 C B 97 -6.002 38.104 2.466 1.00 36.38 N
ATOM 15 C2 C B 97 -5.069 38.884 1.757 1.00 35.89 C
ATOM 16 O2 C B 97 -4.827 38.637 0.570 1.00 36.12 O
ATOM 17 N3 C B 97 -4.442 39.902 2.397 1.00 35.69 N
ATOM 18 C4 C B 97 -4.705 40.159 3.681 1.00 35.54 C
ATOM 19 N4 C B 97 -4.050 41.176 4.244 1.00 35.09 N
ATOM 20 C5 C B 97 -5.646 39.382 4.428 1.00 35.69 C
ATOM 21 C6 C B 97 -6.262 38.376 3.788 1.00 35.98 C
ATOM 22 P C B 98 -4.505 33.074 3.364 1.00 37.78 P
ATOM 23 OP1 C B 98 -4.519 31.597 3.340 1.00 38.38 O
ATOM 24 OP2 C B 98 -4.194 33.785 4.624 1.00 37.80 O
ATOM 25 O5' C B 98 -3.474 33.605 2.266 1.00 37.41 O
TER
ATOM 2 P U A 96 -9.554 39.992 10.321 1.00 32.56 P
ATOM 3 OP1 U A 96 -9.816 38.920 11.306 1.00 33.14 O
ATOM 4 OP2 U A 96 -8.247 40.684 10.348 1.00 32.49 O
ATOM 5 O5' U A 96 -9.776 39.415 8.841 1.00 32.98 O
ATOM 6 C5' U A 96 -11.021 38.829 8.442 1.00 33.51 C
ATOM 7 C4' U A 96 -11.074 38.556 6.946 1.00 33.92 C
ATOM 8 O4' U A 96 -11.139 39.805 6.211 1.00 34.06 O
ATOM 9 C3' U A 96 -9.850 37.865 6.360 1.00 34.02 C
ATOM 10 O3' U A 96 -9.875 36.456 6.542 1.00 34.47 O
ATOM 11 C2' U A 96 -9.908 38.277 4.893 1.00 33.76 C
ATOM 12 O2' U A 96 -10.850 37.546 4.136 1.00 33.87 O
ATOM 13 C1' U A 96 -10.367 39.719 5.021 1.00 33.79 C
ATOM 14 N1 U A 96 -9.240 40.729 5.026 1.00 33.95 N
ATOM 15 C2 U A 96 -8.693 41.149 3.821 1.00 33.58 C
ATOM 16 O2 U A 96 -9.058 40.746 2.733 1.00 33.40 O
ATOM 17 N3 U A 96 -7.683 42.077 3.932 1.00 33.34 N
ATOM 18 C4 U A 96 -7.171 42.621 5.099 1.00 33.18 C
ATOM 19 O4 U A 96 -6.263 43.443 5.044 1.00 33.37 O
ATOM 20 C5 U A 96 -7.784 42.141 6.312 1.00 33.53 C
ATOM 21 C6 U A 96 -8.770 41.236 6.229 1.00 33.82 C
ATOM 22 P C A 97 -8.469 35.711 6.715 1.00 35.42 P
ATOM 23 OP1 C A 97 -8.723 34.305 7.108 1.00 35.67 O
ATOM 24 OP2 C A 97 -7.589 36.557 7.558 1.00 35.54 O
ATOM 25 O5' C A 97 -7.879 35.753 5.226 1.00 35.99 O
TER
ATOM 1 O3' U B 96 -9.875 36.456 6.542 1.00 34.47 O
ATOM 2 P C B 97 -8.469 35.711 6.715 1.00 35.42 P
ATOM 3 OP1 C B 97 -8.723 34.305 7.108 1.00 35.67 O
ATOM 4 OP2 C B 97 -7.589 36.557 7.558 1.00 35.54 O
ATOM 5 O5' C B 97 -7.879 35.753 5.226 1.00 35.99 O
ATOM 6 C5' C B 97 -8.484 34.993 4.179 1.00 36.27 C
ATOM 7 C4' C B 97 -7.759 35.197 2.860 1.00 36.74 C
ATOM 8 O4' C B 97 -7.876 36.582 2.444 1.00 36.70 O
ATOM 9 C3' C B 97 -6.255 34.960 2.886 1.00 36.88 C
ATOM 10 O3' C B 97 -5.925 33.580 2.820 1.00 37.22 O
ATOM 11 C2' C B 97 -5.838 35.718 1.633 1.00 36.83 C
ATOM 12 O2' C B 97 -6.150 35.023 0.445 1.00 37.37 O
ATOM 13 C1' C B 97 -6.701 36.968 1.753 1.00 36.38 C
ATOM 14 N1 C B 97 -6.002 38.104 2.466 1.00 36.38 N
ATOM 15 C2 C B 97 -5.069 38.884 1.757 1.00 35.89 C
ATOM 16 O2 C B 97 -4.827 38.637 0.570 1.00 36.12 O
ATOM 17 N3 C B 97 -4.442 39.902 2.397 1.00 35.69 N
ATOM 18 C4 C B 97 -4.705 40.159 3.681 1.00 35.54 C
ATOM 19 N4 C B 97 -4.050 41.176 4.244 1.00 35.09 N
ATOM 20 C5 C B 97 -5.646 39.382 4.428 1.00 35.69 C
ATOM 21 C6 C B 97 -6.262 38.376 3.788 1.00 35.98 C
ATOM 22 P C B 98 -4.505 33.074 3.364 1.00 37.78 P
ATOM 23 OP1 C B 98 -4.519 31.597 3.340 1.00 38.38 O
ATOM 24 OP2 C B 98 -4.194 33.785 4.624 1.00 37.80 O
ATOM 25 O5' C B 98 -3.474 33.605 2.266 1.00 37.41 O
TER
Atoms:
C4: (-7.171,42.621,5.099)
N3: (-7.683,42.077,3.932)
OP1: (-9.816,38.920,11.306)
OP2: (-8.247,40.684,10.348)
C2: (-8.693,41.149,3.821)
C1': (-10.367,39.719,5.021)
C3': (-9.850,37.865,6.360)
O5': (-9.776,39.415,8.841)
O4': (-11.139,39.805,6.211)
C5': (-11.021,38.829,8.442)
P: (-9.554,39.992,10.321)
C4': (-11.074,38.556,6.946)
C2': (-9.908,38.277,4.893)
O2': (-10.850,37.546,4.136)
N1: (-9.240,40.729,5.026)
O4: (-6.263,43.443,5.044)
O2: (-9.058,40.746,2.733)
C6: (-8.770,41.236,6.229)
C5: (-7.784,42.141,6.312)
O3': (-9.875,36.456,6.542)
N3: (-7.683,42.077,3.932)
OP1: (-9.816,38.920,11.306)
OP2: (-8.247,40.684,10.348)
C2: (-8.693,41.149,3.821)
C1': (-10.367,39.719,5.021)
C3': (-9.850,37.865,6.360)
O5': (-9.776,39.415,8.841)
O4': (-11.139,39.805,6.211)
C5': (-11.021,38.829,8.442)
P: (-9.554,39.992,10.321)
C4': (-11.074,38.556,6.946)
C2': (-9.908,38.277,4.893)
O2': (-10.850,37.546,4.136)
N1: (-9.240,40.729,5.026)
O4: (-6.263,43.443,5.044)
O2: (-9.058,40.746,2.733)
C6: (-8.770,41.236,6.229)
C5: (-7.784,42.141,6.312)
O3': (-9.875,36.456,6.542)
C2: (-5.069,38.884,1.757)
OP1: (-8.723,34.305,7.108)
OP2: (-7.589,36.557,7.558)
C4: (-4.705,40.159,3.681)
O5': (-7.879,35.753,5.226)
C3': (-6.255,34.960,2.886)
C1': (-6.701,36.968,1.753)
O4': (-7.876,36.582,2.444)
C5': (-8.484,34.993,4.179)
P: (-8.469,35.711,6.715)
O2: (-4.827,38.637,0.570)
C4': (-7.759,35.197,2.860)
C2': (-5.838,35.718,1.633)
O2': (-6.150,35.023,0.445)
N1: (-6.002,38.104,2.466)
N3: (-4.442,39.902,2.397)
N4: (-4.050,41.176,4.244)
C6: (-6.262,38.376,3.788)
C5: (-5.646,39.382,4.428)
O3': (-5.925,33.580,2.820)
OP1: (-8.723,34.305,7.108)
OP2: (-7.589,36.557,7.558)
C4: (-4.705,40.159,3.681)
O5': (-7.879,35.753,5.226)
C3': (-6.255,34.960,2.886)
C1': (-6.701,36.968,1.753)
O4': (-7.876,36.582,2.444)
C5': (-8.484,34.993,4.179)
P: (-8.469,35.711,6.715)
O2: (-4.827,38.637,0.570)
C4': (-7.759,35.197,2.860)
C2': (-5.838,35.718,1.633)
O2': (-6.150,35.023,0.445)
N1: (-6.002,38.104,2.466)
N3: (-4.442,39.902,2.397)
N4: (-4.050,41.176,4.244)
C6: (-6.262,38.376,3.788)
C5: (-5.646,39.382,4.428)
O3': (-5.925,33.580,2.820)
Image (generated by PyMOL):