Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0113:0114
Extra
PDB:
ATOM 1 O3' C A 112 76.690 163.428 41.551 1.00 56.12 O
ATOM 2 P U A 113 77.184 164.343 40.330 1.00 57.83 P
ATOM 3 OP1 U A 113 77.202 165.736 40.859 1.00 55.81 O
ATOM 4 OP2 U A 113 76.315 164.009 39.163 1.00 57.17 O
ATOM 5 O5' U A 113 78.680 163.850 40.029 1.00 54.38 O
ATOM 6 C5' U A 113 79.743 164.159 40.949 1.00 54.96 C
ATOM 7 C4' U A 113 81.036 163.451 40.580 1.00 55.49 C
ATOM 8 O4' U A 113 80.793 162.039 40.371 1.00 53.82 O
ATOM 9 C3' U A 113 81.788 163.842 39.313 1.00 57.13 C
ATOM 10 O3' U A 113 82.526 165.058 39.459 1.00 62.85 O
ATOM 11 C2' U A 113 82.745 162.664 39.156 1.00 53.96 C
ATOM 12 O2' U A 113 83.878 162.720 40.001 1.00 50.80 O
ATOM 13 C1' U A 113 81.864 161.501 39.606 1.00 52.59 C
ATOM 14 N1 U A 113 81.325 160.754 38.463 1.00 49.94 N
ATOM 15 C2 U A 113 82.184 159.875 37.823 1.00 48.67 C
ATOM 16 O2 U A 113 83.347 159.709 38.162 1.00 46.70 O
ATOM 17 N3 U A 113 81.634 159.198 36.772 1.00 48.29 N
ATOM 18 C4 U A 113 80.352 159.306 36.302 1.00 49.64 C
ATOM 19 O4 U A 113 80.006 158.610 35.353 1.00 52.98 O
ATOM 20 C5 U A 113 79.526 160.238 37.008 1.00 49.17 C
ATOM 21 C6 U A 113 80.028 160.912 38.038 1.00 48.86 C
ATOM 22 P C A 114 83.107 165.814 38.153 1.00 66.37 P
ATOM 23 OP1 C A 114 83.668 167.106 38.638 1.00 67.21 O
ATOM 24 OP2 C A 114 82.067 165.817 37.077 1.00 64.37 O
ATOM 25 O5' C A 114 84.343 164.920 37.693 1.00 65.10 O
TER
ATOM 1 O3' U B 113 82.526 165.058 39.459 1.00 62.85 O
ATOM 2 P C B 114 83.107 165.814 38.153 1.00 66.37 P
ATOM 3 OP1 C B 114 83.668 167.106 38.638 1.00 67.21 O
ATOM 4 OP2 C B 114 82.067 165.817 37.077 1.00 64.37 O
ATOM 5 O5' C B 114 84.343 164.920 37.693 1.00 65.10 O
ATOM 6 C5' C B 114 85.562 164.911 38.463 1.00 66.46 C
ATOM 7 C4' C B 114 86.584 164.005 37.819 1.00 68.84 C
ATOM 8 O4' C B 114 86.060 162.651 37.759 1.00 67.63 O
ATOM 9 C3' C B 114 86.923 164.319 36.372 1.00 70.99 C
ATOM 10 O3' C B 114 87.868 165.367 36.255 1.00 75.65 O
ATOM 11 C2' C B 114 87.466 162.988 35.880 1.00 70.20 C
ATOM 12 O2' C B 114 88.784 162.725 36.329 1.00 71.85 O
ATOM 13 C1' C B 114 86.499 162.022 36.563 1.00 67.18 C
ATOM 14 N1 C B 114 85.320 161.733 35.720 1.00 63.44 N
ATOM 15 C2 C B 114 85.394 160.678 34.791 1.00 61.99 C
ATOM 16 O2 C B 114 86.459 160.043 34.676 1.00 60.27 O
ATOM 17 N3 C B 114 84.305 160.385 34.038 1.00 60.78 N
ATOM 18 C4 C B 114 83.184 161.097 34.178 1.00 59.37 C
ATOM 19 N4 C B 114 82.129 160.746 33.443 1.00 58.22 N
ATOM 20 C5 C B 114 83.093 162.193 35.088 1.00 59.61 C
ATOM 21 C6 C B 114 84.171 162.471 35.834 1.00 61.38 C
ATOM 22 P U B 115 87.836 166.318 34.962 1.00 79.86 P
ATOM 23 OP1 U B 115 88.814 167.393 35.267 1.00 79.44 O
ATOM 24 OP2 U B 115 86.430 166.679 34.620 1.00 79.17 O
ATOM 25 O5' U B 115 88.395 165.390 33.789 1.00 80.49 O
TER
ATOM 2 P U A 113 77.184 164.343 40.330 1.00 57.83 P
ATOM 3 OP1 U A 113 77.202 165.736 40.859 1.00 55.81 O
ATOM 4 OP2 U A 113 76.315 164.009 39.163 1.00 57.17 O
ATOM 5 O5' U A 113 78.680 163.850 40.029 1.00 54.38 O
ATOM 6 C5' U A 113 79.743 164.159 40.949 1.00 54.96 C
ATOM 7 C4' U A 113 81.036 163.451 40.580 1.00 55.49 C
ATOM 8 O4' U A 113 80.793 162.039 40.371 1.00 53.82 O
ATOM 9 C3' U A 113 81.788 163.842 39.313 1.00 57.13 C
ATOM 10 O3' U A 113 82.526 165.058 39.459 1.00 62.85 O
ATOM 11 C2' U A 113 82.745 162.664 39.156 1.00 53.96 C
ATOM 12 O2' U A 113 83.878 162.720 40.001 1.00 50.80 O
ATOM 13 C1' U A 113 81.864 161.501 39.606 1.00 52.59 C
ATOM 14 N1 U A 113 81.325 160.754 38.463 1.00 49.94 N
ATOM 15 C2 U A 113 82.184 159.875 37.823 1.00 48.67 C
ATOM 16 O2 U A 113 83.347 159.709 38.162 1.00 46.70 O
ATOM 17 N3 U A 113 81.634 159.198 36.772 1.00 48.29 N
ATOM 18 C4 U A 113 80.352 159.306 36.302 1.00 49.64 C
ATOM 19 O4 U A 113 80.006 158.610 35.353 1.00 52.98 O
ATOM 20 C5 U A 113 79.526 160.238 37.008 1.00 49.17 C
ATOM 21 C6 U A 113 80.028 160.912 38.038 1.00 48.86 C
ATOM 22 P C A 114 83.107 165.814 38.153 1.00 66.37 P
ATOM 23 OP1 C A 114 83.668 167.106 38.638 1.00 67.21 O
ATOM 24 OP2 C A 114 82.067 165.817 37.077 1.00 64.37 O
ATOM 25 O5' C A 114 84.343 164.920 37.693 1.00 65.10 O
TER
ATOM 1 O3' U B 113 82.526 165.058 39.459 1.00 62.85 O
ATOM 2 P C B 114 83.107 165.814 38.153 1.00 66.37 P
ATOM 3 OP1 C B 114 83.668 167.106 38.638 1.00 67.21 O
ATOM 4 OP2 C B 114 82.067 165.817 37.077 1.00 64.37 O
ATOM 5 O5' C B 114 84.343 164.920 37.693 1.00 65.10 O
ATOM 6 C5' C B 114 85.562 164.911 38.463 1.00 66.46 C
ATOM 7 C4' C B 114 86.584 164.005 37.819 1.00 68.84 C
ATOM 8 O4' C B 114 86.060 162.651 37.759 1.00 67.63 O
ATOM 9 C3' C B 114 86.923 164.319 36.372 1.00 70.99 C
ATOM 10 O3' C B 114 87.868 165.367 36.255 1.00 75.65 O
ATOM 11 C2' C B 114 87.466 162.988 35.880 1.00 70.20 C
ATOM 12 O2' C B 114 88.784 162.725 36.329 1.00 71.85 O
ATOM 13 C1' C B 114 86.499 162.022 36.563 1.00 67.18 C
ATOM 14 N1 C B 114 85.320 161.733 35.720 1.00 63.44 N
ATOM 15 C2 C B 114 85.394 160.678 34.791 1.00 61.99 C
ATOM 16 O2 C B 114 86.459 160.043 34.676 1.00 60.27 O
ATOM 17 N3 C B 114 84.305 160.385 34.038 1.00 60.78 N
ATOM 18 C4 C B 114 83.184 161.097 34.178 1.00 59.37 C
ATOM 19 N4 C B 114 82.129 160.746 33.443 1.00 58.22 N
ATOM 20 C5 C B 114 83.093 162.193 35.088 1.00 59.61 C
ATOM 21 C6 C B 114 84.171 162.471 35.834 1.00 61.38 C
ATOM 22 P U B 115 87.836 166.318 34.962 1.00 79.86 P
ATOM 23 OP1 U B 115 88.814 167.393 35.267 1.00 79.44 O
ATOM 24 OP2 U B 115 86.430 166.679 34.620 1.00 79.17 O
ATOM 25 O5' U B 115 88.395 165.390 33.789 1.00 80.49 O
TER
Atoms:
C4: (80.352,159.306,36.302)
N3: (81.634,159.198,36.772)
OP1: (77.202,165.736,40.859)
OP2: (76.315,164.009,39.163)
C2: (82.184,159.875,37.823)
C1': (81.864,161.501,39.606)
C3': (81.788,163.842,39.313)
O5': (78.680,163.850,40.029)
O4': (80.793,162.039,40.371)
C5': (79.743,164.159,40.949)
P: (77.184,164.343,40.330)
C4': (81.036,163.451,40.580)
C2': (82.745,162.664,39.156)
O2': (83.878,162.720,40.001)
N1: (81.325,160.754,38.463)
O4: (80.006,158.610,35.353)
O2: (83.347,159.709,38.162)
C6: (80.028,160.912,38.038)
C5: (79.526,160.238,37.008)
O3': (82.526,165.058,39.459)
N3: (81.634,159.198,36.772)
OP1: (77.202,165.736,40.859)
OP2: (76.315,164.009,39.163)
C2: (82.184,159.875,37.823)
C1': (81.864,161.501,39.606)
C3': (81.788,163.842,39.313)
O5': (78.680,163.850,40.029)
O4': (80.793,162.039,40.371)
C5': (79.743,164.159,40.949)
P: (77.184,164.343,40.330)
C4': (81.036,163.451,40.580)
C2': (82.745,162.664,39.156)
O2': (83.878,162.720,40.001)
N1: (81.325,160.754,38.463)
O4: (80.006,158.610,35.353)
O2: (83.347,159.709,38.162)
C6: (80.028,160.912,38.038)
C5: (79.526,160.238,37.008)
O3': (82.526,165.058,39.459)
C2: (85.394,160.678,34.791)
OP1: (83.668,167.106,38.638)
OP2: (82.067,165.817,37.077)
C4: (83.184,161.097,34.178)
O5': (84.343,164.920,37.693)
C3': (86.923,164.319,36.372)
C1': (86.499,162.022,36.563)
O4': (86.060,162.651,37.759)
C5': (85.562,164.911,38.463)
P: (83.107,165.814,38.153)
O2: (86.459,160.043,34.676)
C4': (86.584,164.005,37.819)
C2': (87.466,162.988,35.880)
O2': (88.784,162.725,36.329)
N1: (85.320,161.733,35.720)
N3: (84.305,160.385,34.038)
N4: (82.129,160.746,33.443)
C6: (84.171,162.471,35.834)
C5: (83.093,162.193,35.088)
O3': (87.868,165.367,36.255)
OP1: (83.668,167.106,38.638)
OP2: (82.067,165.817,37.077)
C4: (83.184,161.097,34.178)
O5': (84.343,164.920,37.693)
C3': (86.923,164.319,36.372)
C1': (86.499,162.022,36.563)
O4': (86.060,162.651,37.759)
C5': (85.562,164.911,38.463)
P: (83.107,165.814,38.153)
O2: (86.459,160.043,34.676)
C4': (86.584,164.005,37.819)
C2': (87.466,162.988,35.880)
O2': (88.784,162.725,36.329)
N1: (85.320,161.733,35.720)
N3: (84.305,160.385,34.038)
N4: (82.129,160.746,33.443)
C6: (84.171,162.471,35.834)
C5: (83.093,162.193,35.088)
O3': (87.868,165.367,36.255)
Image (generated by PyMOL):