Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0481:0482
Extra
PDB:
ATOM 1 O3' C A 480 20.916 179.419 72.664 1.00 53.69 O
ATOM 2 P U A 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 3 OP1 U A 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 4 OP2 U A 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 5 O5' U A 481 23.046 178.581 73.723 1.00 54.33 O
ATOM 6 C5' U A 481 22.537 178.024 74.959 1.00 52.40 C
ATOM 7 C4' U A 481 23.358 176.824 75.375 1.00 51.00 C
ATOM 8 O4' U A 481 23.238 175.785 74.375 1.00 50.61 O
ATOM 9 C3' U A 481 24.852 177.055 75.495 1.00 51.43 C
ATOM 10 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 11 C2' U A 481 25.421 175.653 75.315 1.00 50.33 C
ATOM 12 O2' U A 481 25.343 174.874 76.487 1.00 53.06 O
ATOM 13 C1' U A 481 24.453 175.064 74.289 1.00 49.32 C
ATOM 14 N1 U A 481 24.926 175.101 72.898 1.00 48.36 N
ATOM 15 C2 U A 481 25.757 174.078 72.472 1.00 47.52 C
ATOM 16 O2 U A 481 26.127 173.176 73.199 1.00 47.22 O
ATOM 17 N3 U A 481 26.139 174.154 71.160 1.00 46.99 N
ATOM 18 C4 U A 481 25.789 175.125 70.252 1.00 47.11 C
ATOM 19 O4 U A 481 26.205 175.048 69.099 1.00 49.71 O
ATOM 20 C5 U A 481 24.943 176.150 70.768 1.00 46.72 C
ATOM 21 C6 U A 481 24.552 176.106 72.040 1.00 47.06 C
ATOM 22 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 23 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 24 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 25 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
TER
ATOM 1 O3' U B 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 2 P C B 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C B 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C B 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C B 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C B 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C B 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C B 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C B 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C B 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C B 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C B 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C B 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C B 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C B 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C B 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C B 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C B 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C B 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C B 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C B 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A B 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A B 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A B 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A B 483 33.026 178.489 76.270 1.00 56.94 O
TER
ATOM 2 P U A 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 3 OP1 U A 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 4 OP2 U A 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 5 O5' U A 481 23.046 178.581 73.723 1.00 54.33 O
ATOM 6 C5' U A 481 22.537 178.024 74.959 1.00 52.40 C
ATOM 7 C4' U A 481 23.358 176.824 75.375 1.00 51.00 C
ATOM 8 O4' U A 481 23.238 175.785 74.375 1.00 50.61 O
ATOM 9 C3' U A 481 24.852 177.055 75.495 1.00 51.43 C
ATOM 10 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 11 C2' U A 481 25.421 175.653 75.315 1.00 50.33 C
ATOM 12 O2' U A 481 25.343 174.874 76.487 1.00 53.06 O
ATOM 13 C1' U A 481 24.453 175.064 74.289 1.00 49.32 C
ATOM 14 N1 U A 481 24.926 175.101 72.898 1.00 48.36 N
ATOM 15 C2 U A 481 25.757 174.078 72.472 1.00 47.52 C
ATOM 16 O2 U A 481 26.127 173.176 73.199 1.00 47.22 O
ATOM 17 N3 U A 481 26.139 174.154 71.160 1.00 46.99 N
ATOM 18 C4 U A 481 25.789 175.125 70.252 1.00 47.11 C
ATOM 19 O4 U A 481 26.205 175.048 69.099 1.00 49.71 O
ATOM 20 C5 U A 481 24.943 176.150 70.768 1.00 46.72 C
ATOM 21 C6 U A 481 24.552 176.106 72.040 1.00 47.06 C
ATOM 22 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 23 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 24 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 25 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
TER
ATOM 1 O3' U B 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 2 P C B 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C B 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C B 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C B 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C B 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C B 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C B 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C B 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C B 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C B 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C B 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C B 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C B 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C B 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C B 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C B 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C B 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C B 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C B 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C B 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A B 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A B 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A B 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A B 483 33.026 178.489 76.270 1.00 56.94 O
TER
Atoms:
C4: (25.789,175.125,70.252)
N3: (26.139,174.154,71.160)
OP1: (22.220,180.907,74.153)
OP2: (23.138,180.234,71.840)
C2: (25.757,174.078,72.472)
C1': (24.453,175.064,74.289)
C3': (24.852,177.055,75.495)
O5': (23.046,178.581,73.723)
O4': (23.238,175.785,74.375)
C5': (22.537,178.024,74.959)
P: (22.390,179.887,73.079)
C4': (23.358,176.824,75.375)
C2': (25.421,175.653,75.315)
O2': (25.343,174.874,76.487)
N1: (24.926,175.101,72.898)
O4: (26.205,175.048,69.099)
O2: (26.127,173.176,73.199)
C6: (24.552,176.106,72.040)
C5: (24.943,176.150,70.768)
O3': (25.179,177.609,76.765)
N3: (26.139,174.154,71.160)
OP1: (22.220,180.907,74.153)
OP2: (23.138,180.234,71.840)
C2: (25.757,174.078,72.472)
C1': (24.453,175.064,74.289)
C3': (24.852,177.055,75.495)
O5': (23.046,178.581,73.723)
O4': (23.238,175.785,74.375)
C5': (22.537,178.024,74.959)
P: (22.390,179.887,73.079)
C4': (23.358,176.824,75.375)
C2': (25.421,175.653,75.315)
O2': (25.343,174.874,76.487)
N1: (24.926,175.101,72.898)
O4: (26.205,175.048,69.099)
O2: (26.127,173.176,73.199)
C6: (24.552,176.106,72.040)
C5: (24.943,176.150,70.768)
O3': (25.179,177.609,76.765)
C2: (29.795,175.144,72.134)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
Image (generated by PyMOL):