Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:16:17
Extra
PDB:
ATOM 1 O3' C A 5 34.676 -30.541 153.107 1.00 66.13 O
ATOM 2 P U A 6 35.654 -29.721 152.142 1.00 67.55 P
ATOM 3 OP1 U A 6 36.133 -30.693 151.119 1.00 67.13 O
ATOM 4 OP2 U A 6 36.655 -29.009 153.003 1.00 67.99 O
ATOM 5 O5' U A 6 34.669 -28.664 151.469 1.00 67.06 O
ATOM 6 C5' U A 6 33.466 -29.077 150.828 1.00 66.72 C
ATOM 7 C4' U A 6 32.414 -27.980 150.851 1.00 66.60 C
ATOM 8 O4' U A 6 32.016 -27.701 152.217 1.00 67.29 O
ATOM 9 C3' U A 6 32.839 -26.607 150.331 1.00 66.22 C
ATOM 10 O3' U A 6 32.875 -26.517 148.918 1.00 65.48 O
ATOM 11 C2' U A 6 31.801 -25.698 150.960 1.00 66.46 C
ATOM 12 O2' U A 6 30.567 -25.801 150.271 1.00 66.09 O
ATOM 13 C1' U A 6 31.637 -26.342 152.327 1.00 67.23 C
ATOM 14 N1 U A 6 32.466 -25.684 153.339 1.00 67.75 N
ATOM 15 C2 U A 6 31.980 -24.484 153.795 1.00 67.90 C
ATOM 16 O2 U A 6 30.945 -24.000 153.392 1.00 67.63 O
ATOM 17 N3 U A 6 32.732 -23.866 154.749 1.00 68.41 N
ATOM 18 C4 U A 6 33.913 -24.301 155.282 1.00 68.76 C
ATOM 19 O4 U A 6 34.479 -23.622 156.128 1.00 69.21 O
ATOM 20 C5 U A 6 34.348 -25.547 154.753 1.00 68.57 C
ATOM 21 C6 U A 6 33.632 -26.193 153.820 1.00 68.08 C
ATOM 22 P C A 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 23 OP1 C A 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 24 OP2 C A 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 25 O5' C A 7 33.139 -24.011 148.672 1.00 65.61 O
TER
ATOM 1 O3' U B 6 32.875 -26.517 148.918 1.00 65.48 O
ATOM 2 P C B 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 3 OP1 C B 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 4 OP2 C B 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 5 O5' C B 7 33.139 -24.011 148.672 1.00 65.61 O
ATOM 6 C5' C B 7 31.909 -23.573 148.134 1.00 65.28 C
ATOM 7 C4' C B 7 31.407 -22.322 148.805 1.00 65.54 C
ATOM 8 O4' C B 7 31.310 -22.527 150.226 1.00 66.29 O
ATOM 9 C3' C B 7 32.267 -21.084 148.680 1.00 65.43 C
ATOM 10 O3' C B 7 32.129 -20.440 147.436 1.00 64.77 O
ATOM 11 C2' C B 7 31.772 -20.233 149.832 1.00 65.98 C
ATOM 12 O2' C B 7 30.566 -19.569 149.478 1.00 65.76 O
ATOM 13 C1' C B 7 31.474 -21.296 150.894 1.00 66.58 C
ATOM 14 N1 C B 7 32.582 -21.428 151.833 1.00 67.11 N
ATOM 15 C2 C B 7 32.632 -20.528 152.858 1.00 67.62 C
ATOM 16 O2 C B 7 31.716 -19.702 152.932 1.00 67.61 O
ATOM 17 N3 C B 7 33.672 -20.601 153.715 1.00 68.12 N
ATOM 18 C4 C B 7 34.627 -21.515 153.522 1.00 68.08 C
ATOM 19 N4 C B 7 35.643 -21.566 154.367 1.00 68.59 N
ATOM 20 C5 C B 7 34.596 -22.443 152.456 1.00 67.55 C
ATOM 21 C6 C B 7 33.553 -22.356 151.637 1.00 67.07 C
ATOM 22 P A B 8 33.170 -19.298 147.034 1.00 68.22 P
ATOM 23 OP1 A B 8 33.023 -19.042 145.573 1.00 67.48 O
ATOM 24 OP2 A B 8 34.499 -19.721 147.568 1.00 68.54 O
ATOM 25 O5' A B 8 32.649 -18.053 147.848 1.00 68.59 O
TER
ATOM 2 P U A 6 35.654 -29.721 152.142 1.00 67.55 P
ATOM 3 OP1 U A 6 36.133 -30.693 151.119 1.00 67.13 O
ATOM 4 OP2 U A 6 36.655 -29.009 153.003 1.00 67.99 O
ATOM 5 O5' U A 6 34.669 -28.664 151.469 1.00 67.06 O
ATOM 6 C5' U A 6 33.466 -29.077 150.828 1.00 66.72 C
ATOM 7 C4' U A 6 32.414 -27.980 150.851 1.00 66.60 C
ATOM 8 O4' U A 6 32.016 -27.701 152.217 1.00 67.29 O
ATOM 9 C3' U A 6 32.839 -26.607 150.331 1.00 66.22 C
ATOM 10 O3' U A 6 32.875 -26.517 148.918 1.00 65.48 O
ATOM 11 C2' U A 6 31.801 -25.698 150.960 1.00 66.46 C
ATOM 12 O2' U A 6 30.567 -25.801 150.271 1.00 66.09 O
ATOM 13 C1' U A 6 31.637 -26.342 152.327 1.00 67.23 C
ATOM 14 N1 U A 6 32.466 -25.684 153.339 1.00 67.75 N
ATOM 15 C2 U A 6 31.980 -24.484 153.795 1.00 67.90 C
ATOM 16 O2 U A 6 30.945 -24.000 153.392 1.00 67.63 O
ATOM 17 N3 U A 6 32.732 -23.866 154.749 1.00 68.41 N
ATOM 18 C4 U A 6 33.913 -24.301 155.282 1.00 68.76 C
ATOM 19 O4 U A 6 34.479 -23.622 156.128 1.00 69.21 O
ATOM 20 C5 U A 6 34.348 -25.547 154.753 1.00 68.57 C
ATOM 21 C6 U A 6 33.632 -26.193 153.820 1.00 68.08 C
ATOM 22 P C A 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 23 OP1 C A 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 24 OP2 C A 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 25 O5' C A 7 33.139 -24.011 148.672 1.00 65.61 O
TER
ATOM 1 O3' U B 6 32.875 -26.517 148.918 1.00 65.48 O
ATOM 2 P C B 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 3 OP1 C B 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 4 OP2 C B 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 5 O5' C B 7 33.139 -24.011 148.672 1.00 65.61 O
ATOM 6 C5' C B 7 31.909 -23.573 148.134 1.00 65.28 C
ATOM 7 C4' C B 7 31.407 -22.322 148.805 1.00 65.54 C
ATOM 8 O4' C B 7 31.310 -22.527 150.226 1.00 66.29 O
ATOM 9 C3' C B 7 32.267 -21.084 148.680 1.00 65.43 C
ATOM 10 O3' C B 7 32.129 -20.440 147.436 1.00 64.77 O
ATOM 11 C2' C B 7 31.772 -20.233 149.832 1.00 65.98 C
ATOM 12 O2' C B 7 30.566 -19.569 149.478 1.00 65.76 O
ATOM 13 C1' C B 7 31.474 -21.296 150.894 1.00 66.58 C
ATOM 14 N1 C B 7 32.582 -21.428 151.833 1.00 67.11 N
ATOM 15 C2 C B 7 32.632 -20.528 152.858 1.00 67.62 C
ATOM 16 O2 C B 7 31.716 -19.702 152.932 1.00 67.61 O
ATOM 17 N3 C B 7 33.672 -20.601 153.715 1.00 68.12 N
ATOM 18 C4 C B 7 34.627 -21.515 153.522 1.00 68.08 C
ATOM 19 N4 C B 7 35.643 -21.566 154.367 1.00 68.59 N
ATOM 20 C5 C B 7 34.596 -22.443 152.456 1.00 67.55 C
ATOM 21 C6 C B 7 33.553 -22.356 151.637 1.00 67.07 C
ATOM 22 P A B 8 33.170 -19.298 147.034 1.00 68.22 P
ATOM 23 OP1 A B 8 33.023 -19.042 145.573 1.00 67.48 O
ATOM 24 OP2 A B 8 34.499 -19.721 147.568 1.00 68.54 O
ATOM 25 O5' A B 8 32.649 -18.053 147.848 1.00 68.59 O
TER
Atoms:
C4: (33.913,-24.301,155.282)
N3: (32.732,-23.866,154.749)
OP1: (36.133,-30.693,151.119)
OP2: (36.655,-29.009,153.003)
C2: (31.980,-24.484,153.795)
C1': (31.637,-26.342,152.327)
C3': (32.839,-26.607,150.331)
O5': (34.669,-28.664,151.469)
O4': (32.016,-27.701,152.217)
C5': (33.466,-29.077,150.828)
P: (35.654,-29.721,152.142)
C4': (32.414,-27.980,150.851)
C2': (31.801,-25.698,150.960)
O2': (30.567,-25.801,150.271)
N1: (32.466,-25.684,153.339)
O4: (34.479,-23.622,156.128)
O2: (30.945,-24.000,153.392)
C6: (33.632,-26.193,153.820)
C5: (34.348,-25.547,154.753)
O3': (32.875,-26.517,148.918)
N3: (32.732,-23.866,154.749)
OP1: (36.133,-30.693,151.119)
OP2: (36.655,-29.009,153.003)
C2: (31.980,-24.484,153.795)
C1': (31.637,-26.342,152.327)
C3': (32.839,-26.607,150.331)
O5': (34.669,-28.664,151.469)
O4': (32.016,-27.701,152.217)
C5': (33.466,-29.077,150.828)
P: (35.654,-29.721,152.142)
C4': (32.414,-27.980,150.851)
C2': (31.801,-25.698,150.960)
O2': (30.567,-25.801,150.271)
N1: (32.466,-25.684,153.339)
O4: (34.479,-23.622,156.128)
O2: (30.945,-24.000,153.392)
C6: (33.632,-26.193,153.820)
C5: (34.348,-25.547,154.753)
O3': (32.875,-26.517,148.918)
C2: (32.632,-20.528,152.858)
OP1: (33.588,-25.597,146.698)
OP2: (35.161,-25.512,148.761)
C4: (34.627,-21.515,153.522)
O5': (33.139,-24.011,148.672)
C3': (32.267,-21.084,148.680)
C1': (31.474,-21.296,150.894)
O4': (31.310,-22.527,150.226)
C5': (31.909,-23.573,148.134)
P: (33.791,-25.397,148.191)
O2: (31.716,-19.702,152.932)
C4': (31.407,-22.322,148.805)
C2': (31.772,-20.233,149.832)
O2': (30.566,-19.569,149.478)
N1: (32.582,-21.428,151.833)
N3: (33.672,-20.601,153.715)
N4: (35.643,-21.566,154.367)
C6: (33.553,-22.356,151.637)
C5: (34.596,-22.443,152.456)
O3': (32.129,-20.440,147.436)
OP1: (33.588,-25.597,146.698)
OP2: (35.161,-25.512,148.761)
C4: (34.627,-21.515,153.522)
O5': (33.139,-24.011,148.672)
C3': (32.267,-21.084,148.680)
C1': (31.474,-21.296,150.894)
O4': (31.310,-22.527,150.226)
C5': (31.909,-23.573,148.134)
P: (33.791,-25.397,148.191)
O2: (31.716,-19.702,152.932)
C4': (31.407,-22.322,148.805)
C2': (31.772,-20.233,149.832)
O2': (30.566,-19.569,149.478)
N1: (32.582,-21.428,151.833)
N3: (33.672,-20.601,153.715)
N4: (35.643,-21.566,154.367)
C6: (33.553,-22.356,151.637)
C5: (34.596,-22.443,152.456)
O3': (32.129,-20.440,147.436)
Image (generated by PyMOL):