Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNR:D3:D4
Extra
PDB:
ATOM 1 O3' G A 2 -18.922 15.655 15.782 1.00 30.39 O
ATOM 2 P U A 3 -19.800 14.483 16.466 1.00 31.92 P
ATOM 3 OP1 U A 3 -19.120 13.210 16.167 1.00 29.61 O
ATOM 4 OP2 U A 3 -21.236 14.651 16.120 1.00 32.89 O
ATOM 5 O5' U A 3 -19.649 14.731 18.029 1.00 30.42 O
ATOM 6 C5' U A 3 -18.374 14.689 18.655 1.00 28.13 C
ATOM 7 C4' U A 3 -18.535 14.883 20.137 1.00 25.66 C
ATOM 8 O4' U A 3 -19.147 16.175 20.359 1.00 27.57 O
ATOM 9 C3' U A 3 -19.487 13.903 20.803 1.00 26.74 C
ATOM 10 O3' U A 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 11 C2' U A 3 -19.944 14.678 22.025 1.00 26.22 C
ATOM 12 O2' U A 3 -19.007 14.593 23.073 1.00 27.78 O
ATOM 13 C1' U A 3 -19.994 16.108 21.488 1.00 27.47 C
ATOM 14 N1 U A 3 -21.341 16.564 21.109 1.00 25.03 N
ATOM 15 C2 U A 3 -22.225 16.825 22.141 1.00 24.81 C
ATOM 16 O2 U A 3 -21.943 16.631 23.309 1.00 22.93 O
ATOM 17 N3 U A 3 -23.450 17.312 21.755 1.00 20.43 N
ATOM 18 C4 U A 3 -23.881 17.550 20.463 1.00 24.45 C
ATOM 19 O4 U A 3 -24.979 18.085 20.285 1.00 20.46 O
ATOM 20 C5 U A 3 -22.924 17.217 19.441 1.00 22.28 C
ATOM 21 C6 U A 3 -21.714 16.745 19.795 1.00 25.36 C
ATOM 22 P C A 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 23 OP1 C A 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 24 OP2 C A 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 25 O5' C A 4 -20.583 11.238 22.171 1.00 27.27 O
TER
ATOM 1 O3' U B 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 2 P C B 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 3 OP1 C B 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 4 OP2 C B 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 5 O5' C B 4 -20.583 11.238 22.171 1.00 27.27 O
ATOM 6 C5' C B 4 -20.233 11.346 23.546 1.00 26.58 C
ATOM 7 C4' C B 4 -21.469 11.627 24.372 1.00 24.84 C
ATOM 8 O4' C B 4 -21.988 12.934 24.034 1.00 25.90 O
ATOM 9 C3' C B 4 -22.627 10.677 24.131 1.00 24.80 C
ATOM 10 O3' C B 4 -22.472 9.551 24.979 1.00 26.97 O
ATOM 11 C2' C B 4 -23.847 11.516 24.517 1.00 23.71 C
ATOM 12 O2' C B 4 -24.154 11.489 25.898 1.00 20.07 O
ATOM 13 C1' C B 4 -23.402 12.927 24.130 1.00 24.82 C
ATOM 14 N1 C B 4 -23.963 13.411 22.857 1.00 24.54 N
ATOM 15 C2 C B 4 -25.213 14.032 22.873 1.00 23.85 C
ATOM 16 O2 C B 4 -25.815 14.123 23.949 1.00 23.18 O
ATOM 17 N3 C B 4 -25.735 14.511 21.716 1.00 22.76 N
ATOM 18 C4 C B 4 -25.059 14.374 20.575 1.00 24.45 C
ATOM 19 N4 C B 4 -25.609 14.861 19.456 1.00 24.14 N
ATOM 20 C5 C B 4 -23.785 13.732 20.526 1.00 23.65 C
ATOM 21 C6 C B 4 -23.280 13.267 21.681 1.00 23.28 C
ATOM 22 P A B 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 23 OP1 A B 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 24 OP2 A B 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 25 O5' A B 5 -22.126 7.151 25.586 1.00 28.93 O
TER
ATOM 2 P U A 3 -19.800 14.483 16.466 1.00 31.92 P
ATOM 3 OP1 U A 3 -19.120 13.210 16.167 1.00 29.61 O
ATOM 4 OP2 U A 3 -21.236 14.651 16.120 1.00 32.89 O
ATOM 5 O5' U A 3 -19.649 14.731 18.029 1.00 30.42 O
ATOM 6 C5' U A 3 -18.374 14.689 18.655 1.00 28.13 C
ATOM 7 C4' U A 3 -18.535 14.883 20.137 1.00 25.66 C
ATOM 8 O4' U A 3 -19.147 16.175 20.359 1.00 27.57 O
ATOM 9 C3' U A 3 -19.487 13.903 20.803 1.00 26.74 C
ATOM 10 O3' U A 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 11 C2' U A 3 -19.944 14.678 22.025 1.00 26.22 C
ATOM 12 O2' U A 3 -19.007 14.593 23.073 1.00 27.78 O
ATOM 13 C1' U A 3 -19.994 16.108 21.488 1.00 27.47 C
ATOM 14 N1 U A 3 -21.341 16.564 21.109 1.00 25.03 N
ATOM 15 C2 U A 3 -22.225 16.825 22.141 1.00 24.81 C
ATOM 16 O2 U A 3 -21.943 16.631 23.309 1.00 22.93 O
ATOM 17 N3 U A 3 -23.450 17.312 21.755 1.00 20.43 N
ATOM 18 C4 U A 3 -23.881 17.550 20.463 1.00 24.45 C
ATOM 19 O4 U A 3 -24.979 18.085 20.285 1.00 20.46 O
ATOM 20 C5 U A 3 -22.924 17.217 19.441 1.00 22.28 C
ATOM 21 C6 U A 3 -21.714 16.745 19.795 1.00 25.36 C
ATOM 22 P C A 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 23 OP1 C A 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 24 OP2 C A 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 25 O5' C A 4 -20.583 11.238 22.171 1.00 27.27 O
TER
ATOM 1 O3' U B 3 -18.788 12.728 21.202 1.00 26.87 O
ATOM 2 P C B 4 -19.474 11.299 21.023 1.00 28.98 P
ATOM 3 OP1 C B 4 -18.430 10.286 21.315 1.00 31.78 O
ATOM 4 OP2 C B 4 -20.193 11.271 19.728 1.00 28.83 O
ATOM 5 O5' C B 4 -20.583 11.238 22.171 1.00 27.27 O
ATOM 6 C5' C B 4 -20.233 11.346 23.546 1.00 26.58 C
ATOM 7 C4' C B 4 -21.469 11.627 24.372 1.00 24.84 C
ATOM 8 O4' C B 4 -21.988 12.934 24.034 1.00 25.90 O
ATOM 9 C3' C B 4 -22.627 10.677 24.131 1.00 24.80 C
ATOM 10 O3' C B 4 -22.472 9.551 24.979 1.00 26.97 O
ATOM 11 C2' C B 4 -23.847 11.516 24.517 1.00 23.71 C
ATOM 12 O2' C B 4 -24.154 11.489 25.898 1.00 20.07 O
ATOM 13 C1' C B 4 -23.402 12.927 24.130 1.00 24.82 C
ATOM 14 N1 C B 4 -23.963 13.411 22.857 1.00 24.54 N
ATOM 15 C2 C B 4 -25.213 14.032 22.873 1.00 23.85 C
ATOM 16 O2 C B 4 -25.815 14.123 23.949 1.00 23.18 O
ATOM 17 N3 C B 4 -25.735 14.511 21.716 1.00 22.76 N
ATOM 18 C4 C B 4 -25.059 14.374 20.575 1.00 24.45 C
ATOM 19 N4 C B 4 -25.609 14.861 19.456 1.00 24.14 N
ATOM 20 C5 C B 4 -23.785 13.732 20.526 1.00 23.65 C
ATOM 21 C6 C B 4 -23.280 13.267 21.681 1.00 23.28 C
ATOM 22 P A B 5 -22.615 8.067 24.378 1.00 28.91 P
ATOM 23 OP1 A B 5 -21.641 7.953 23.275 1.00 26.23 O
ATOM 24 OP2 A B 5 -24.053 7.788 24.119 1.00 28.06 O
ATOM 25 O5' A B 5 -22.126 7.151 25.586 1.00 28.93 O
TER
Atoms:
C4: (-23.881,17.550,20.463)
N3: (-23.450,17.312,21.755)
OP1: (-19.120,13.210,16.167)
OP2: (-21.236,14.651,16.120)
C2: (-22.225,16.825,22.141)
C1': (-19.994,16.108,21.488)
C3': (-19.487,13.903,20.803)
O5': (-19.649,14.731,18.029)
O4': (-19.147,16.175,20.359)
C5': (-18.374,14.689,18.655)
P: (-19.800,14.483,16.466)
C4': (-18.535,14.883,20.137)
C2': (-19.944,14.678,22.025)
O2': (-19.007,14.593,23.073)
N1: (-21.341,16.564,21.109)
O4: (-24.979,18.085,20.285)
O2: (-21.943,16.631,23.309)
C6: (-21.714,16.745,19.795)
C5: (-22.924,17.217,19.441)
O3': (-18.788,12.728,21.202)
N3: (-23.450,17.312,21.755)
OP1: (-19.120,13.210,16.167)
OP2: (-21.236,14.651,16.120)
C2: (-22.225,16.825,22.141)
C1': (-19.994,16.108,21.488)
C3': (-19.487,13.903,20.803)
O5': (-19.649,14.731,18.029)
O4': (-19.147,16.175,20.359)
C5': (-18.374,14.689,18.655)
P: (-19.800,14.483,16.466)
C4': (-18.535,14.883,20.137)
C2': (-19.944,14.678,22.025)
O2': (-19.007,14.593,23.073)
N1: (-21.341,16.564,21.109)
O4: (-24.979,18.085,20.285)
O2: (-21.943,16.631,23.309)
C6: (-21.714,16.745,19.795)
C5: (-22.924,17.217,19.441)
O3': (-18.788,12.728,21.202)
C2: (-25.213,14.032,22.873)
OP1: (-18.430,10.286,21.315)
OP2: (-20.193,11.271,19.728)
C4: (-25.059,14.374,20.575)
O5': (-20.583,11.238,22.171)
C3': (-22.627,10.677,24.131)
C1': (-23.402,12.927,24.130)
O4': (-21.988,12.934,24.034)
C5': (-20.233,11.346,23.546)
P: (-19.474,11.299,21.023)
O2: (-25.815,14.123,23.949)
C4': (-21.469,11.627,24.372)
C2': (-23.847,11.516,24.517)
O2': (-24.154,11.489,25.898)
N1: (-23.963,13.411,22.857)
N3: (-25.735,14.511,21.716)
N4: (-25.609,14.861,19.456)
C6: (-23.280,13.267,21.681)
C5: (-23.785,13.732,20.526)
O3': (-22.472,9.551,24.979)
OP1: (-18.430,10.286,21.315)
OP2: (-20.193,11.271,19.728)
C4: (-25.059,14.374,20.575)
O5': (-20.583,11.238,22.171)
C3': (-22.627,10.677,24.131)
C1': (-23.402,12.927,24.130)
O4': (-21.988,12.934,24.034)
C5': (-20.233,11.346,23.546)
P: (-19.474,11.299,21.023)
O2: (-25.815,14.123,23.949)
C4': (-21.469,11.627,24.372)
C2': (-23.847,11.516,24.517)
O2': (-24.154,11.489,25.898)
N1: (-23.963,13.411,22.857)
N3: (-25.735,14.511,21.716)
N4: (-25.609,14.861,19.456)
C6: (-23.280,13.267,21.681)
C5: (-23.785,13.732,20.526)
O3': (-22.472,9.551,24.979)
Image (generated by PyMOL):