Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A279:A280
Extra
PDB:
ATOM 1 O3' A A 278 -52.205 -61.057 99.117 1.00 69.13 O
ATOM 2 P U A 279 -51.339 -61.246 97.783 1.00 78.74 P
ATOM 3 OP1 U A 279 -51.834 -62.473 97.110 1.00 78.74 O
ATOM 4 OP2 U A 279 -49.908 -61.173 98.181 1.00 78.74 O
ATOM 5 O5' U A 279 -51.721 -59.959 96.923 1.00 78.74 O
ATOM 6 C5' U A 279 -53.034 -59.779 96.409 1.00 78.74 C
ATOM 7 C4' U A 279 -53.028 -58.906 95.177 1.00 78.74 C
ATOM 8 O4' U A 279 -52.766 -57.524 95.546 1.00 78.74 O
ATOM 9 C3' U A 279 -51.951 -59.218 94.154 1.00 78.74 C
ATOM 10 O3' U A 279 -52.278 -60.311 93.323 1.00 78.74 O
ATOM 11 C2' U A 279 -51.805 -57.895 93.417 1.00 78.74 C
ATOM 12 O2' U A 279 -52.882 -57.687 92.517 1.00 78.74 O
ATOM 13 C1' U A 279 -51.941 -56.912 94.572 1.00 78.74 C
ATOM 14 N1 U A 279 -50.629 -56.617 95.190 1.00 77.24 N
ATOM 15 C2 U A 279 -50.016 -55.395 94.963 1.00 77.24 C
ATOM 16 O2 U A 279 -50.488 -54.500 94.274 1.00 77.24 O
ATOM 17 N3 U A 279 -48.805 -55.252 95.590 1.00 77.24 N
ATOM 18 C4 U A 279 -48.159 -56.164 96.392 1.00 77.24 C
ATOM 19 O4 U A 279 -47.070 -55.880 96.878 1.00 77.24 O
ATOM 20 C5 U A 279 -48.852 -57.396 96.576 1.00 77.24 C
ATOM 21 C6 U A 279 -50.030 -57.572 95.979 1.00 77.24 C
ATOM 22 P C A 280 -51.128 -61.308 92.819 1.00 78.76 P
ATOM 23 OP1 C A 280 -51.807 -62.500 92.241 1.00 78.76 O
ATOM 24 OP2 C A 280 -50.186 -61.498 93.956 1.00 78.76 O
ATOM 25 O5' C A 280 -50.427 -60.469 91.660 1.00 78.76 O
TER
ATOM 1 O3' U B 279 -52.278 -60.311 93.323 1.00 78.74 O
ATOM 2 P C B 280 -51.128 -61.308 92.819 1.00 78.76 P
ATOM 3 OP1 C B 280 -51.807 -62.500 92.241 1.00 78.76 O
ATOM 4 OP2 C B 280 -50.186 -61.498 93.956 1.00 78.76 O
ATOM 5 O5' C B 280 -50.427 -60.469 91.660 1.00 78.76 O
ATOM 6 C5' C B 280 -51.173 -60.037 90.531 1.00 78.76 C
ATOM 7 C4' C B 280 -50.602 -58.779 89.932 1.00 78.76 C
ATOM 8 O4' C B 280 -50.513 -57.743 90.947 1.00 78.76 O
ATOM 9 C3' C B 280 -49.181 -58.880 89.410 1.00 78.76 C
ATOM 10 O3' C B 280 -49.085 -59.517 88.154 1.00 78.76 O
ATOM 11 C2' C B 280 -48.736 -57.428 89.415 1.00 78.76 C
ATOM 12 O2' C B 280 -49.339 -56.697 88.356 1.00 78.76 O
ATOM 13 C1' C B 280 -49.342 -56.971 90.736 1.00 78.76 C
ATOM 14 N1 C B 280 -48.409 -57.208 91.865 1.00 77.77 N
ATOM 15 C2 C B 280 -47.264 -56.397 91.919 1.00 77.77 C
ATOM 16 O2 C B 280 -47.102 -55.522 91.045 1.00 77.77 O
ATOM 17 N3 C B 280 -46.368 -56.580 92.922 1.00 77.77 N
ATOM 18 C4 C B 280 -46.572 -57.530 93.837 1.00 77.77 C
ATOM 19 N4 C B 280 -45.651 -57.657 94.797 1.00 77.77 N
ATOM 20 C5 C B 280 -47.724 -58.378 93.799 1.00 77.77 C
ATOM 21 C6 C B 280 -48.606 -58.191 92.804 1.00 77.77 C
ATOM 22 P A B 281 -47.935 -60.615 87.902 1.00 81.96 P
ATOM 23 OP1 A B 281 -48.591 -61.802 87.291 1.00 81.96 O
ATOM 24 OP2 A B 281 -47.201 -60.790 89.186 1.00 81.96 O
ATOM 25 O5' A B 281 -46.996 -59.888 86.834 1.00 81.96 O
TER
ATOM 2 P U A 279 -51.339 -61.246 97.783 1.00 78.74 P
ATOM 3 OP1 U A 279 -51.834 -62.473 97.110 1.00 78.74 O
ATOM 4 OP2 U A 279 -49.908 -61.173 98.181 1.00 78.74 O
ATOM 5 O5' U A 279 -51.721 -59.959 96.923 1.00 78.74 O
ATOM 6 C5' U A 279 -53.034 -59.779 96.409 1.00 78.74 C
ATOM 7 C4' U A 279 -53.028 -58.906 95.177 1.00 78.74 C
ATOM 8 O4' U A 279 -52.766 -57.524 95.546 1.00 78.74 O
ATOM 9 C3' U A 279 -51.951 -59.218 94.154 1.00 78.74 C
ATOM 10 O3' U A 279 -52.278 -60.311 93.323 1.00 78.74 O
ATOM 11 C2' U A 279 -51.805 -57.895 93.417 1.00 78.74 C
ATOM 12 O2' U A 279 -52.882 -57.687 92.517 1.00 78.74 O
ATOM 13 C1' U A 279 -51.941 -56.912 94.572 1.00 78.74 C
ATOM 14 N1 U A 279 -50.629 -56.617 95.190 1.00 77.24 N
ATOM 15 C2 U A 279 -50.016 -55.395 94.963 1.00 77.24 C
ATOM 16 O2 U A 279 -50.488 -54.500 94.274 1.00 77.24 O
ATOM 17 N3 U A 279 -48.805 -55.252 95.590 1.00 77.24 N
ATOM 18 C4 U A 279 -48.159 -56.164 96.392 1.00 77.24 C
ATOM 19 O4 U A 279 -47.070 -55.880 96.878 1.00 77.24 O
ATOM 20 C5 U A 279 -48.852 -57.396 96.576 1.00 77.24 C
ATOM 21 C6 U A 279 -50.030 -57.572 95.979 1.00 77.24 C
ATOM 22 P C A 280 -51.128 -61.308 92.819 1.00 78.76 P
ATOM 23 OP1 C A 280 -51.807 -62.500 92.241 1.00 78.76 O
ATOM 24 OP2 C A 280 -50.186 -61.498 93.956 1.00 78.76 O
ATOM 25 O5' C A 280 -50.427 -60.469 91.660 1.00 78.76 O
TER
ATOM 1 O3' U B 279 -52.278 -60.311 93.323 1.00 78.74 O
ATOM 2 P C B 280 -51.128 -61.308 92.819 1.00 78.76 P
ATOM 3 OP1 C B 280 -51.807 -62.500 92.241 1.00 78.76 O
ATOM 4 OP2 C B 280 -50.186 -61.498 93.956 1.00 78.76 O
ATOM 5 O5' C B 280 -50.427 -60.469 91.660 1.00 78.76 O
ATOM 6 C5' C B 280 -51.173 -60.037 90.531 1.00 78.76 C
ATOM 7 C4' C B 280 -50.602 -58.779 89.932 1.00 78.76 C
ATOM 8 O4' C B 280 -50.513 -57.743 90.947 1.00 78.76 O
ATOM 9 C3' C B 280 -49.181 -58.880 89.410 1.00 78.76 C
ATOM 10 O3' C B 280 -49.085 -59.517 88.154 1.00 78.76 O
ATOM 11 C2' C B 280 -48.736 -57.428 89.415 1.00 78.76 C
ATOM 12 O2' C B 280 -49.339 -56.697 88.356 1.00 78.76 O
ATOM 13 C1' C B 280 -49.342 -56.971 90.736 1.00 78.76 C
ATOM 14 N1 C B 280 -48.409 -57.208 91.865 1.00 77.77 N
ATOM 15 C2 C B 280 -47.264 -56.397 91.919 1.00 77.77 C
ATOM 16 O2 C B 280 -47.102 -55.522 91.045 1.00 77.77 O
ATOM 17 N3 C B 280 -46.368 -56.580 92.922 1.00 77.77 N
ATOM 18 C4 C B 280 -46.572 -57.530 93.837 1.00 77.77 C
ATOM 19 N4 C B 280 -45.651 -57.657 94.797 1.00 77.77 N
ATOM 20 C5 C B 280 -47.724 -58.378 93.799 1.00 77.77 C
ATOM 21 C6 C B 280 -48.606 -58.191 92.804 1.00 77.77 C
ATOM 22 P A B 281 -47.935 -60.615 87.902 1.00 81.96 P
ATOM 23 OP1 A B 281 -48.591 -61.802 87.291 1.00 81.96 O
ATOM 24 OP2 A B 281 -47.201 -60.790 89.186 1.00 81.96 O
ATOM 25 O5' A B 281 -46.996 -59.888 86.834 1.00 81.96 O
TER
Atoms:
C4: (-48.159,-56.164,96.392)
N3: (-48.805,-55.252,95.590)
OP1: (-51.834,-62.473,97.110)
OP2: (-49.908,-61.173,98.181)
C2: (-50.016,-55.395,94.963)
C1': (-51.941,-56.912,94.572)
C3': (-51.951,-59.218,94.154)
O5': (-51.721,-59.959,96.923)
O4': (-52.766,-57.524,95.546)
C5': (-53.034,-59.779,96.409)
P: (-51.339,-61.246,97.783)
C4': (-53.028,-58.906,95.177)
C2': (-51.805,-57.895,93.417)
O2': (-52.882,-57.687,92.517)
N1: (-50.629,-56.617,95.190)
O4: (-47.070,-55.880,96.878)
O2: (-50.488,-54.500,94.274)
C6: (-50.030,-57.572,95.979)
C5: (-48.852,-57.396,96.576)
O3': (-52.278,-60.311,93.323)
N3: (-48.805,-55.252,95.590)
OP1: (-51.834,-62.473,97.110)
OP2: (-49.908,-61.173,98.181)
C2: (-50.016,-55.395,94.963)
C1': (-51.941,-56.912,94.572)
C3': (-51.951,-59.218,94.154)
O5': (-51.721,-59.959,96.923)
O4': (-52.766,-57.524,95.546)
C5': (-53.034,-59.779,96.409)
P: (-51.339,-61.246,97.783)
C4': (-53.028,-58.906,95.177)
C2': (-51.805,-57.895,93.417)
O2': (-52.882,-57.687,92.517)
N1: (-50.629,-56.617,95.190)
O4: (-47.070,-55.880,96.878)
O2: (-50.488,-54.500,94.274)
C6: (-50.030,-57.572,95.979)
C5: (-48.852,-57.396,96.576)
O3': (-52.278,-60.311,93.323)
C2: (-47.264,-56.397,91.919)
OP1: (-51.807,-62.500,92.241)
OP2: (-50.186,-61.498,93.956)
C4: (-46.572,-57.530,93.837)
O5': (-50.427,-60.469,91.660)
C3': (-49.181,-58.880,89.410)
C1': (-49.342,-56.971,90.736)
O4': (-50.513,-57.743,90.947)
C5': (-51.173,-60.037,90.531)
P: (-51.128,-61.308,92.819)
O2: (-47.102,-55.522,91.045)
C4': (-50.602,-58.779,89.932)
C2': (-48.736,-57.428,89.415)
O2': (-49.339,-56.697,88.356)
N1: (-48.409,-57.208,91.865)
N3: (-46.368,-56.580,92.922)
N4: (-45.651,-57.657,94.797)
C6: (-48.606,-58.191,92.804)
C5: (-47.724,-58.378,93.799)
O3': (-49.085,-59.517,88.154)
OP1: (-51.807,-62.500,92.241)
OP2: (-50.186,-61.498,93.956)
C4: (-46.572,-57.530,93.837)
O5': (-50.427,-60.469,91.660)
C3': (-49.181,-58.880,89.410)
C1': (-49.342,-56.971,90.736)
O4': (-50.513,-57.743,90.947)
C5': (-51.173,-60.037,90.531)
P: (-51.128,-61.308,92.819)
O2: (-47.102,-55.522,91.045)
C4': (-50.602,-58.779,89.932)
C2': (-48.736,-57.428,89.415)
O2': (-49.339,-56.697,88.356)
N1: (-48.409,-57.208,91.865)
N3: (-46.368,-56.580,92.922)
N4: (-45.651,-57.657,94.797)
C6: (-48.606,-58.191,92.804)
C5: (-47.724,-58.378,93.799)
O3': (-49.085,-59.517,88.154)
Image (generated by PyMOL):