Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0604:0605
Extra
PDB:
ATOM 1 O3' G A 603 17.400 116.443 108.190 1.00 52.42 O
ATOM 2 P U A 604 18.964 116.076 108.187 1.00 53.53 P
ATOM 3 OP1 U A 604 19.254 115.287 109.405 1.00 54.51 O
ATOM 4 OP2 U A 604 19.749 117.316 107.918 1.00 52.38 O
ATOM 5 O5' U A 604 19.085 115.077 106.959 1.00 50.94 O
ATOM 6 C5' U A 604 18.428 113.814 106.997 1.00 48.06 C
ATOM 7 C4' U A 604 18.580 113.108 105.677 1.00 50.05 C
ATOM 8 O4' U A 604 17.890 113.864 104.651 1.00 50.19 O
ATOM 9 C3' U A 604 19.992 112.978 105.137 1.00 49.37 C
ATOM 10 O3' U A 604 20.698 111.900 105.732 1.00 49.68 O
ATOM 11 C2' U A 604 19.727 112.749 103.659 1.00 50.14 C
ATOM 12 O2' U A 604 19.268 111.442 103.401 1.00 51.31 O
ATOM 13 C1' U A 604 18.572 113.720 103.417 1.00 49.24 C
ATOM 14 N1 U A 604 19.014 115.052 102.976 1.00 49.23 N
ATOM 15 C2 U A 604 19.361 115.213 101.644 1.00 47.88 C
ATOM 16 O2 U A 604 19.333 114.299 100.840 1.00 48.53 O
ATOM 17 N3 U A 604 19.744 116.486 101.293 1.00 47.24 N
ATOM 18 C4 U A 604 19.811 117.594 102.119 1.00 47.97 C
ATOM 19 O4 U A 604 20.160 118.678 101.654 1.00 46.56 O
ATOM 20 C5 U A 604 19.448 117.347 103.481 1.00 49.55 C
ATOM 21 C6 U A 604 19.074 116.116 103.856 1.00 49.65 C
ATOM 22 P C A 605 22.260 112.071 106.086 1.00 50.01 P
ATOM 23 OP1 C A 605 22.671 110.869 106.852 1.00 50.28 O
ATOM 24 OP2 C A 605 22.484 113.422 106.660 1.00 48.97 O
ATOM 25 O5' C A 605 22.991 112.024 104.673 1.00 47.86 O
TER
ATOM 1 O3' U B 604 20.698 111.900 105.732 1.00 49.68 O
ATOM 2 P C B 605 22.260 112.071 106.086 1.00 50.01 P
ATOM 3 OP1 C B 605 22.671 110.869 106.852 1.00 50.28 O
ATOM 4 OP2 C B 605 22.484 113.422 106.660 1.00 48.97 O
ATOM 5 O5' C B 605 22.991 112.024 104.673 1.00 47.86 O
ATOM 6 C5' C B 605 22.993 110.831 103.880 1.00 42.23 C
ATOM 7 C4' C B 605 23.445 111.145 102.474 1.00 42.86 C
ATOM 8 O4' C B 605 22.512 112.077 101.858 1.00 39.95 O
ATOM 9 C3' C B 605 24.774 111.872 102.329 1.00 42.00 C
ATOM 10 O3' C B 605 25.905 111.023 102.473 1.00 43.08 O
ATOM 11 C2' C B 605 24.659 112.417 100.918 1.00 40.08 C
ATOM 12 O2' C B 605 24.855 111.413 99.949 1.00 38.41 O
ATOM 13 C1' C B 605 23.198 112.863 100.901 1.00 38.75 C
ATOM 14 N1 C B 605 23.088 114.284 101.269 1.00 39.70 N
ATOM 15 C2 C B 605 23.253 115.247 100.262 1.00 38.86 C
ATOM 16 O2 C B 605 23.436 114.868 99.095 1.00 38.90 O
ATOM 17 N3 C B 605 23.212 116.556 100.585 1.00 37.15 N
ATOM 18 C4 C B 605 23.013 116.924 101.845 1.00 37.16 C
ATOM 19 N4 C B 605 23.014 118.225 102.117 1.00 36.26 N
ATOM 20 C5 C B 605 22.811 115.971 102.887 1.00 38.22 C
ATOM 21 C6 C B 605 22.855 114.673 102.558 1.00 38.68 C
ATOM 22 P G B 606 27.254 111.608 103.124 1.00 44.08 P
ATOM 23 OP1 G B 606 28.168 110.444 103.264 1.00 41.55 O
ATOM 24 OP2 G B 606 26.908 112.417 104.321 1.00 40.93 O
ATOM 25 O5' G B 606 27.825 112.599 102.010 1.00 42.34 O
TER
ATOM 2 P U A 604 18.964 116.076 108.187 1.00 53.53 P
ATOM 3 OP1 U A 604 19.254 115.287 109.405 1.00 54.51 O
ATOM 4 OP2 U A 604 19.749 117.316 107.918 1.00 52.38 O
ATOM 5 O5' U A 604 19.085 115.077 106.959 1.00 50.94 O
ATOM 6 C5' U A 604 18.428 113.814 106.997 1.00 48.06 C
ATOM 7 C4' U A 604 18.580 113.108 105.677 1.00 50.05 C
ATOM 8 O4' U A 604 17.890 113.864 104.651 1.00 50.19 O
ATOM 9 C3' U A 604 19.992 112.978 105.137 1.00 49.37 C
ATOM 10 O3' U A 604 20.698 111.900 105.732 1.00 49.68 O
ATOM 11 C2' U A 604 19.727 112.749 103.659 1.00 50.14 C
ATOM 12 O2' U A 604 19.268 111.442 103.401 1.00 51.31 O
ATOM 13 C1' U A 604 18.572 113.720 103.417 1.00 49.24 C
ATOM 14 N1 U A 604 19.014 115.052 102.976 1.00 49.23 N
ATOM 15 C2 U A 604 19.361 115.213 101.644 1.00 47.88 C
ATOM 16 O2 U A 604 19.333 114.299 100.840 1.00 48.53 O
ATOM 17 N3 U A 604 19.744 116.486 101.293 1.00 47.24 N
ATOM 18 C4 U A 604 19.811 117.594 102.119 1.00 47.97 C
ATOM 19 O4 U A 604 20.160 118.678 101.654 1.00 46.56 O
ATOM 20 C5 U A 604 19.448 117.347 103.481 1.00 49.55 C
ATOM 21 C6 U A 604 19.074 116.116 103.856 1.00 49.65 C
ATOM 22 P C A 605 22.260 112.071 106.086 1.00 50.01 P
ATOM 23 OP1 C A 605 22.671 110.869 106.852 1.00 50.28 O
ATOM 24 OP2 C A 605 22.484 113.422 106.660 1.00 48.97 O
ATOM 25 O5' C A 605 22.991 112.024 104.673 1.00 47.86 O
TER
ATOM 1 O3' U B 604 20.698 111.900 105.732 1.00 49.68 O
ATOM 2 P C B 605 22.260 112.071 106.086 1.00 50.01 P
ATOM 3 OP1 C B 605 22.671 110.869 106.852 1.00 50.28 O
ATOM 4 OP2 C B 605 22.484 113.422 106.660 1.00 48.97 O
ATOM 5 O5' C B 605 22.991 112.024 104.673 1.00 47.86 O
ATOM 6 C5' C B 605 22.993 110.831 103.880 1.00 42.23 C
ATOM 7 C4' C B 605 23.445 111.145 102.474 1.00 42.86 C
ATOM 8 O4' C B 605 22.512 112.077 101.858 1.00 39.95 O
ATOM 9 C3' C B 605 24.774 111.872 102.329 1.00 42.00 C
ATOM 10 O3' C B 605 25.905 111.023 102.473 1.00 43.08 O
ATOM 11 C2' C B 605 24.659 112.417 100.918 1.00 40.08 C
ATOM 12 O2' C B 605 24.855 111.413 99.949 1.00 38.41 O
ATOM 13 C1' C B 605 23.198 112.863 100.901 1.00 38.75 C
ATOM 14 N1 C B 605 23.088 114.284 101.269 1.00 39.70 N
ATOM 15 C2 C B 605 23.253 115.247 100.262 1.00 38.86 C
ATOM 16 O2 C B 605 23.436 114.868 99.095 1.00 38.90 O
ATOM 17 N3 C B 605 23.212 116.556 100.585 1.00 37.15 N
ATOM 18 C4 C B 605 23.013 116.924 101.845 1.00 37.16 C
ATOM 19 N4 C B 605 23.014 118.225 102.117 1.00 36.26 N
ATOM 20 C5 C B 605 22.811 115.971 102.887 1.00 38.22 C
ATOM 21 C6 C B 605 22.855 114.673 102.558 1.00 38.68 C
ATOM 22 P G B 606 27.254 111.608 103.124 1.00 44.08 P
ATOM 23 OP1 G B 606 28.168 110.444 103.264 1.00 41.55 O
ATOM 24 OP2 G B 606 26.908 112.417 104.321 1.00 40.93 O
ATOM 25 O5' G B 606 27.825 112.599 102.010 1.00 42.34 O
TER
Atoms:
C4: (19.811,117.594,102.119)
N3: (19.744,116.486,101.293)
OP1: (19.254,115.287,109.405)
OP2: (19.749,117.316,107.918)
C2: (19.361,115.213,101.644)
C1': (18.572,113.720,103.417)
C3': (19.992,112.978,105.137)
O5': (19.085,115.077,106.959)
O4': (17.890,113.864,104.651)
C5': (18.428,113.814,106.997)
P: (18.964,116.076,108.187)
C4': (18.580,113.108,105.677)
C2': (19.727,112.749,103.659)
O2': (19.268,111.442,103.401)
N1: (19.014,115.052,102.976)
O4: (20.160,118.678,101.654)
O2: (19.333,114.299,100.840)
C6: (19.074,116.116,103.856)
C5: (19.448,117.347,103.481)
O3': (20.698,111.900,105.732)
N3: (19.744,116.486,101.293)
OP1: (19.254,115.287,109.405)
OP2: (19.749,117.316,107.918)
C2: (19.361,115.213,101.644)
C1': (18.572,113.720,103.417)
C3': (19.992,112.978,105.137)
O5': (19.085,115.077,106.959)
O4': (17.890,113.864,104.651)
C5': (18.428,113.814,106.997)
P: (18.964,116.076,108.187)
C4': (18.580,113.108,105.677)
C2': (19.727,112.749,103.659)
O2': (19.268,111.442,103.401)
N1: (19.014,115.052,102.976)
O4: (20.160,118.678,101.654)
O2: (19.333,114.299,100.840)
C6: (19.074,116.116,103.856)
C5: (19.448,117.347,103.481)
O3': (20.698,111.900,105.732)
C2: (23.253,115.247,100.262)
OP1: (22.671,110.869,106.852)
OP2: (22.484,113.422,106.660)
C4: (23.013,116.924,101.845)
O5': (22.991,112.024,104.673)
C3': (24.774,111.872,102.329)
C1': (23.198,112.863,100.901)
O4': (22.512,112.077,101.858)
C5': (22.993,110.831,103.880)
P: (22.260,112.071,106.086)
O2: (23.436,114.868,99.095)
C4': (23.445,111.145,102.474)
C2': (24.659,112.417,100.918)
O2': (24.855,111.413,99.949)
N1: (23.088,114.284,101.269)
N3: (23.212,116.556,100.585)
N4: (23.014,118.225,102.117)
C6: (22.855,114.673,102.558)
C5: (22.811,115.971,102.887)
O3': (25.905,111.023,102.473)
OP1: (22.671,110.869,106.852)
OP2: (22.484,113.422,106.660)
C4: (23.013,116.924,101.845)
O5': (22.991,112.024,104.673)
C3': (24.774,111.872,102.329)
C1': (23.198,112.863,100.901)
O4': (22.512,112.077,101.858)
C5': (22.993,110.831,103.880)
P: (22.260,112.071,106.086)
O2: (23.436,114.868,99.095)
C4': (23.445,111.145,102.474)
C2': (24.659,112.417,100.918)
O2': (24.855,111.413,99.949)
N1: (23.088,114.284,101.269)
N3: (23.212,116.556,100.585)
N4: (23.014,118.225,102.117)
C6: (22.855,114.673,102.558)
C5: (22.811,115.971,102.887)
O3': (25.905,111.023,102.473)
Image (generated by PyMOL):