Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:025:026
Extra
PDB:
ATOM 1 O3' C A 24 46.655 124.241 47.546 1.00 38.68 O
ATOM 2 P U A 25 47.553 123.825 46.284 1.00 39.41 P
ATOM 3 OP1 U A 25 48.764 123.144 46.792 1.00 37.61 O
ATOM 4 OP2 U A 25 47.691 124.994 45.380 1.00 39.57 O
ATOM 5 O5' U A 25 46.671 122.753 45.504 1.00 39.97 O
ATOM 6 C5' U A 25 46.354 121.487 46.099 1.00 40.26 C
ATOM 7 C4' U A 25 45.231 120.821 45.346 1.00 38.65 C
ATOM 8 O4' U A 25 44.044 121.654 45.398 1.00 39.91 O
ATOM 9 C3' U A 25 45.440 120.612 43.855 1.00 38.58 C
ATOM 10 O3' U A 25 46.264 119.496 43.594 1.00 38.86 O
ATOM 11 C2' U A 25 44.012 120.412 43.376 1.00 40.10 C
ATOM 12 O2' U A 25 43.484 119.141 43.719 1.00 40.48 O
ATOM 13 C1' U A 25 43.288 121.468 44.207 1.00 41.13 C
ATOM 14 N1 U A 25 43.196 122.747 43.487 1.00 42.24 N
ATOM 15 C2 U A 25 42.176 122.877 42.567 1.00 44.20 C
ATOM 16 O2 U A 25 41.384 121.981 42.326 1.00 45.42 O
ATOM 17 N3 U A 25 42.115 124.093 41.934 1.00 45.08 N
ATOM 18 C4 U A 25 42.961 125.165 42.111 1.00 45.74 C
ATOM 19 O4 U A 25 42.766 126.197 41.465 1.00 46.80 O
ATOM 20 C5 U A 25 44.011 124.949 43.065 1.00 45.03 C
ATOM 21 C6 U A 25 44.087 123.780 43.708 1.00 43.96 C
ATOM 22 P C A 26 47.013 119.377 42.186 1.00 41.03 P
ATOM 23 OP1 C A 26 47.951 118.233 42.279 1.00 40.00 O
ATOM 24 OP2 C A 26 47.520 120.711 41.794 1.00 44.01 O
ATOM 25 O5' C A 26 45.853 118.988 41.179 1.00 42.75 O
TER
ATOM 1 O3' U B 25 46.264 119.496 43.594 1.00 38.86 O
ATOM 2 P C B 26 47.013 119.377 42.186 1.00 41.03 P
ATOM 3 OP1 C B 26 47.951 118.233 42.279 1.00 40.00 O
ATOM 4 OP2 C B 26 47.520 120.711 41.794 1.00 44.01 O
ATOM 5 O5' C B 26 45.853 118.988 41.179 1.00 42.75 O
ATOM 6 C5' C B 26 45.150 117.749 41.334 1.00 42.41 C
ATOM 7 C4' C B 26 43.993 117.692 40.381 1.00 41.39 C
ATOM 8 O4' C B 26 43.118 118.819 40.643 1.00 40.92 O
ATOM 9 C3' C B 26 44.333 117.869 38.913 1.00 42.50 C
ATOM 10 O3' C B 26 44.842 116.700 38.304 1.00 45.03 O
ATOM 11 C2' C B 26 42.993 118.277 38.342 1.00 42.04 C
ATOM 12 O2' C B 26 42.111 117.171 38.275 1.00 44.37 O
ATOM 13 C1' C B 26 42.507 119.233 39.428 1.00 42.11 C
ATOM 14 N1 C B 26 42.871 120.642 39.167 1.00 41.28 N
ATOM 15 C2 C B 26 42.028 121.416 38.362 1.00 41.22 C
ATOM 16 O2 C B 26 41.036 120.881 37.832 1.00 38.30 O
ATOM 17 N3 C B 26 42.315 122.725 38.174 1.00 42.24 N
ATOM 18 C4 C B 26 43.400 123.261 38.738 1.00 43.42 C
ATOM 19 N4 C B 26 43.620 124.568 38.552 1.00 43.39 N
ATOM 20 C5 C B 26 44.300 122.486 39.526 1.00 40.54 C
ATOM 21 C6 C B 26 44.000 121.195 39.713 1.00 41.82 C
ATOM 22 P A B 27 45.828 116.844 37.041 1.00 48.69 P
ATOM 23 OP1 A B 27 46.316 115.483 36.699 1.00 49.39 O
ATOM 24 OP2 A B 27 46.814 117.922 37.315 1.00 50.12 O
ATOM 25 O5' A B 27 44.860 117.371 35.890 1.00 48.73 O
TER
ATOM 2 P U A 25 47.553 123.825 46.284 1.00 39.41 P
ATOM 3 OP1 U A 25 48.764 123.144 46.792 1.00 37.61 O
ATOM 4 OP2 U A 25 47.691 124.994 45.380 1.00 39.57 O
ATOM 5 O5' U A 25 46.671 122.753 45.504 1.00 39.97 O
ATOM 6 C5' U A 25 46.354 121.487 46.099 1.00 40.26 C
ATOM 7 C4' U A 25 45.231 120.821 45.346 1.00 38.65 C
ATOM 8 O4' U A 25 44.044 121.654 45.398 1.00 39.91 O
ATOM 9 C3' U A 25 45.440 120.612 43.855 1.00 38.58 C
ATOM 10 O3' U A 25 46.264 119.496 43.594 1.00 38.86 O
ATOM 11 C2' U A 25 44.012 120.412 43.376 1.00 40.10 C
ATOM 12 O2' U A 25 43.484 119.141 43.719 1.00 40.48 O
ATOM 13 C1' U A 25 43.288 121.468 44.207 1.00 41.13 C
ATOM 14 N1 U A 25 43.196 122.747 43.487 1.00 42.24 N
ATOM 15 C2 U A 25 42.176 122.877 42.567 1.00 44.20 C
ATOM 16 O2 U A 25 41.384 121.981 42.326 1.00 45.42 O
ATOM 17 N3 U A 25 42.115 124.093 41.934 1.00 45.08 N
ATOM 18 C4 U A 25 42.961 125.165 42.111 1.00 45.74 C
ATOM 19 O4 U A 25 42.766 126.197 41.465 1.00 46.80 O
ATOM 20 C5 U A 25 44.011 124.949 43.065 1.00 45.03 C
ATOM 21 C6 U A 25 44.087 123.780 43.708 1.00 43.96 C
ATOM 22 P C A 26 47.013 119.377 42.186 1.00 41.03 P
ATOM 23 OP1 C A 26 47.951 118.233 42.279 1.00 40.00 O
ATOM 24 OP2 C A 26 47.520 120.711 41.794 1.00 44.01 O
ATOM 25 O5' C A 26 45.853 118.988 41.179 1.00 42.75 O
TER
ATOM 1 O3' U B 25 46.264 119.496 43.594 1.00 38.86 O
ATOM 2 P C B 26 47.013 119.377 42.186 1.00 41.03 P
ATOM 3 OP1 C B 26 47.951 118.233 42.279 1.00 40.00 O
ATOM 4 OP2 C B 26 47.520 120.711 41.794 1.00 44.01 O
ATOM 5 O5' C B 26 45.853 118.988 41.179 1.00 42.75 O
ATOM 6 C5' C B 26 45.150 117.749 41.334 1.00 42.41 C
ATOM 7 C4' C B 26 43.993 117.692 40.381 1.00 41.39 C
ATOM 8 O4' C B 26 43.118 118.819 40.643 1.00 40.92 O
ATOM 9 C3' C B 26 44.333 117.869 38.913 1.00 42.50 C
ATOM 10 O3' C B 26 44.842 116.700 38.304 1.00 45.03 O
ATOM 11 C2' C B 26 42.993 118.277 38.342 1.00 42.04 C
ATOM 12 O2' C B 26 42.111 117.171 38.275 1.00 44.37 O
ATOM 13 C1' C B 26 42.507 119.233 39.428 1.00 42.11 C
ATOM 14 N1 C B 26 42.871 120.642 39.167 1.00 41.28 N
ATOM 15 C2 C B 26 42.028 121.416 38.362 1.00 41.22 C
ATOM 16 O2 C B 26 41.036 120.881 37.832 1.00 38.30 O
ATOM 17 N3 C B 26 42.315 122.725 38.174 1.00 42.24 N
ATOM 18 C4 C B 26 43.400 123.261 38.738 1.00 43.42 C
ATOM 19 N4 C B 26 43.620 124.568 38.552 1.00 43.39 N
ATOM 20 C5 C B 26 44.300 122.486 39.526 1.00 40.54 C
ATOM 21 C6 C B 26 44.000 121.195 39.713 1.00 41.82 C
ATOM 22 P A B 27 45.828 116.844 37.041 1.00 48.69 P
ATOM 23 OP1 A B 27 46.316 115.483 36.699 1.00 49.39 O
ATOM 24 OP2 A B 27 46.814 117.922 37.315 1.00 50.12 O
ATOM 25 O5' A B 27 44.860 117.371 35.890 1.00 48.73 O
TER
Atoms:
C4: (42.961,125.165,42.111)
N3: (42.115,124.093,41.934)
OP1: (48.764,123.144,46.792)
OP2: (47.691,124.994,45.380)
C2: (42.176,122.877,42.567)
C1': (43.288,121.468,44.207)
C3': (45.440,120.612,43.855)
O5': (46.671,122.753,45.504)
O4': (44.044,121.654,45.398)
C5': (46.354,121.487,46.099)
P: (47.553,123.825,46.284)
C4': (45.231,120.821,45.346)
C2': (44.012,120.412,43.376)
O2': (43.484,119.141,43.719)
N1: (43.196,122.747,43.487)
O4: (42.766,126.197,41.465)
O2: (41.384,121.981,42.326)
C6: (44.087,123.780,43.708)
C5: (44.011,124.949,43.065)
O3': (46.264,119.496,43.594)
N3: (42.115,124.093,41.934)
OP1: (48.764,123.144,46.792)
OP2: (47.691,124.994,45.380)
C2: (42.176,122.877,42.567)
C1': (43.288,121.468,44.207)
C3': (45.440,120.612,43.855)
O5': (46.671,122.753,45.504)
O4': (44.044,121.654,45.398)
C5': (46.354,121.487,46.099)
P: (47.553,123.825,46.284)
C4': (45.231,120.821,45.346)
C2': (44.012,120.412,43.376)
O2': (43.484,119.141,43.719)
N1: (43.196,122.747,43.487)
O4: (42.766,126.197,41.465)
O2: (41.384,121.981,42.326)
C6: (44.087,123.780,43.708)
C5: (44.011,124.949,43.065)
O3': (46.264,119.496,43.594)
C2: (42.028,121.416,38.362)
OP1: (47.951,118.233,42.279)
OP2: (47.520,120.711,41.794)
C4: (43.400,123.261,38.738)
O5': (45.853,118.988,41.179)
C3': (44.333,117.869,38.913)
C1': (42.507,119.233,39.428)
O4': (43.118,118.819,40.643)
C5': (45.150,117.749,41.334)
P: (47.013,119.377,42.186)
O2: (41.036,120.881,37.832)
C4': (43.993,117.692,40.381)
C2': (42.993,118.277,38.342)
O2': (42.111,117.171,38.275)
N1: (42.871,120.642,39.167)
N3: (42.315,122.725,38.174)
N4: (43.620,124.568,38.552)
C6: (44.000,121.195,39.713)
C5: (44.300,122.486,39.526)
O3': (44.842,116.700,38.304)
OP1: (47.951,118.233,42.279)
OP2: (47.520,120.711,41.794)
C4: (43.400,123.261,38.738)
O5': (45.853,118.988,41.179)
C3': (44.333,117.869,38.913)
C1': (42.507,119.233,39.428)
O4': (43.118,118.819,40.643)
C5': (45.150,117.749,41.334)
P: (47.013,119.377,42.186)
O2: (41.036,120.881,37.832)
C4': (43.993,117.692,40.381)
C2': (42.993,118.277,38.342)
O2': (42.111,117.171,38.275)
N1: (42.871,120.642,39.167)
N3: (42.315,122.725,38.174)
N4: (43.620,124.568,38.552)
C6: (44.000,121.195,39.713)
C5: (44.300,122.486,39.526)
O3': (44.842,116.700,38.304)
Image (generated by PyMOL):