Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01263:01264
Extra
PDB:
ATOM 1 O3' C A1262 26.024 122.148 60.143 1.00 41.62 O
ATOM 2 P U A1263 25.513 122.112 58.626 1.00 43.29 P
ATOM 3 OP1 U A1263 24.902 123.439 58.360 1.00 44.26 O
ATOM 4 OP2 U A1263 24.723 120.877 58.396 1.00 41.01 O
ATOM 5 O5' U A1263 26.848 121.960 57.781 1.00 40.65 O
ATOM 6 C5' U A1263 27.823 123.012 57.731 1.00 38.30 C
ATOM 7 C4' U A1263 28.903 122.648 56.750 1.00 36.76 C
ATOM 8 O4' U A1263 29.482 121.387 57.162 1.00 35.34 O
ATOM 9 C3' U A1263 28.403 122.389 55.340 1.00 35.77 C
ATOM 10 O3' U A1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 11 C2' U A1263 29.454 121.441 54.787 1.00 34.83 C
ATOM 12 O2' U A1263 30.624 122.122 54.391 1.00 34.46 O
ATOM 13 C1' U A1263 29.787 120.606 56.024 1.00 35.28 C
ATOM 14 N1 U A1263 29.109 119.307 56.156 1.00 35.87 N
ATOM 15 C2 U A1263 29.475 118.284 55.292 1.00 37.54 C
ATOM 16 O2 U A1263 30.297 118.424 54.403 1.00 39.41 O
ATOM 17 N3 U A1263 28.843 117.087 55.511 1.00 37.99 N
ATOM 18 C4 U A1263 27.902 116.815 56.477 1.00 38.67 C
ATOM 19 O4 U A1263 27.439 115.679 56.568 1.00 40.36 O
ATOM 20 C5 U A1263 27.565 117.923 57.313 1.00 37.90 C
ATOM 21 C6 U A1263 28.160 119.100 57.126 1.00 35.97 C
ATOM 22 P C A1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 23 OP1 C A1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 24 OP2 C A1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 25 O5' C A1264 27.198 123.324 52.402 1.00 32.67 O
TER
ATOM 1 O3' U B1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 2 P C B1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 3 OP1 C B1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 4 OP2 C B1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 5 O5' C B1264 27.198 123.324 52.402 1.00 32.67 O
ATOM 6 C5' C B1264 28.280 123.699 51.545 1.00 29.51 C
ATOM 7 C4' C B1264 28.745 122.510 50.734 1.00 30.06 C
ATOM 8 O4' C B1264 29.212 121.466 51.630 1.00 30.21 O
ATOM 9 C3' C B1264 27.711 121.792 49.880 1.00 29.12 C
ATOM 10 O3' C B1264 27.462 122.453 48.646 1.00 29.51 O
ATOM 11 C2' C B1264 28.369 120.439 49.665 1.00 26.67 C
ATOM 12 O2' C B1264 29.404 120.516 48.714 1.00 27.51 O
ATOM 13 C1' C B1264 28.988 120.192 51.038 1.00 27.47 C
ATOM 14 N1 C B1264 28.106 119.402 51.918 1.00 27.23 N
ATOM 15 C2 C B1264 28.163 118.007 51.851 1.00 26.41 C
ATOM 16 O2 C B1264 28.995 117.478 51.109 1.00 26.51 O
ATOM 17 N3 C B1264 27.313 117.272 52.602 1.00 26.61 N
ATOM 18 C4 C B1264 26.439 117.879 53.404 1.00 27.11 C
ATOM 19 N4 C B1264 25.586 117.119 54.094 1.00 25.05 N
ATOM 20 C5 C B1264 26.390 119.297 53.526 1.00 28.94 C
ATOM 21 C6 C B1264 27.231 120.013 52.771 1.00 27.30 C
ATOM 22 P U B1265 26.203 122.011 47.758 1.00 29.95 P
ATOM 23 OP1 U B1265 26.149 122.887 46.567 1.00 27.90 O
ATOM 24 OP2 U B1265 25.031 121.913 48.652 1.00 29.60 O
ATOM 25 O5' U B1265 26.573 120.539 47.283 1.00 29.45 O
TER
ATOM 2 P U A1263 25.513 122.112 58.626 1.00 43.29 P
ATOM 3 OP1 U A1263 24.902 123.439 58.360 1.00 44.26 O
ATOM 4 OP2 U A1263 24.723 120.877 58.396 1.00 41.01 O
ATOM 5 O5' U A1263 26.848 121.960 57.781 1.00 40.65 O
ATOM 6 C5' U A1263 27.823 123.012 57.731 1.00 38.30 C
ATOM 7 C4' U A1263 28.903 122.648 56.750 1.00 36.76 C
ATOM 8 O4' U A1263 29.482 121.387 57.162 1.00 35.34 O
ATOM 9 C3' U A1263 28.403 122.389 55.340 1.00 35.77 C
ATOM 10 O3' U A1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 11 C2' U A1263 29.454 121.441 54.787 1.00 34.83 C
ATOM 12 O2' U A1263 30.624 122.122 54.391 1.00 34.46 O
ATOM 13 C1' U A1263 29.787 120.606 56.024 1.00 35.28 C
ATOM 14 N1 U A1263 29.109 119.307 56.156 1.00 35.87 N
ATOM 15 C2 U A1263 29.475 118.284 55.292 1.00 37.54 C
ATOM 16 O2 U A1263 30.297 118.424 54.403 1.00 39.41 O
ATOM 17 N3 U A1263 28.843 117.087 55.511 1.00 37.99 N
ATOM 18 C4 U A1263 27.902 116.815 56.477 1.00 38.67 C
ATOM 19 O4 U A1263 27.439 115.679 56.568 1.00 40.36 O
ATOM 20 C5 U A1263 27.565 117.923 57.313 1.00 37.90 C
ATOM 21 C6 U A1263 28.160 119.100 57.126 1.00 35.97 C
ATOM 22 P C A1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 23 OP1 C A1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 24 OP2 C A1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 25 O5' C A1264 27.198 123.324 52.402 1.00 32.67 O
TER
ATOM 1 O3' U B1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 2 P C B1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 3 OP1 C B1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 4 OP2 C B1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 5 O5' C B1264 27.198 123.324 52.402 1.00 32.67 O
ATOM 6 C5' C B1264 28.280 123.699 51.545 1.00 29.51 C
ATOM 7 C4' C B1264 28.745 122.510 50.734 1.00 30.06 C
ATOM 8 O4' C B1264 29.212 121.466 51.630 1.00 30.21 O
ATOM 9 C3' C B1264 27.711 121.792 49.880 1.00 29.12 C
ATOM 10 O3' C B1264 27.462 122.453 48.646 1.00 29.51 O
ATOM 11 C2' C B1264 28.369 120.439 49.665 1.00 26.67 C
ATOM 12 O2' C B1264 29.404 120.516 48.714 1.00 27.51 O
ATOM 13 C1' C B1264 28.988 120.192 51.038 1.00 27.47 C
ATOM 14 N1 C B1264 28.106 119.402 51.918 1.00 27.23 N
ATOM 15 C2 C B1264 28.163 118.007 51.851 1.00 26.41 C
ATOM 16 O2 C B1264 28.995 117.478 51.109 1.00 26.51 O
ATOM 17 N3 C B1264 27.313 117.272 52.602 1.00 26.61 N
ATOM 18 C4 C B1264 26.439 117.879 53.404 1.00 27.11 C
ATOM 19 N4 C B1264 25.586 117.119 54.094 1.00 25.05 N
ATOM 20 C5 C B1264 26.390 119.297 53.526 1.00 28.94 C
ATOM 21 C6 C B1264 27.231 120.013 52.771 1.00 27.30 C
ATOM 22 P U B1265 26.203 122.011 47.758 1.00 29.95 P
ATOM 23 OP1 U B1265 26.149 122.887 46.567 1.00 27.90 O
ATOM 24 OP2 U B1265 25.031 121.913 48.652 1.00 29.60 O
ATOM 25 O5' U B1265 26.573 120.539 47.283 1.00 29.45 O
TER
Atoms:
C4: (27.902,116.815,56.477)
N3: (28.843,117.087,55.511)
OP1: (24.902,123.439,58.360)
OP2: (24.723,120.877,58.396)
C2: (29.475,118.284,55.292)
C1': (29.787,120.606,56.024)
C3': (28.403,122.389,55.340)
O5': (26.848,121.960,57.781)
O4': (29.482,121.387,57.162)
C5': (27.823,123.012,57.731)
P: (25.513,122.112,58.626)
C4': (28.903,122.648,56.750)
C2': (29.454,121.441,54.787)
O2': (30.624,122.122,54.391)
N1: (29.109,119.307,56.156)
O4: (27.439,115.679,56.568)
O2: (30.297,118.424,54.403)
C6: (28.160,119.100,57.126)
C5: (27.565,117.923,57.313)
O3': (28.340,123.613,54.619)
N3: (28.843,117.087,55.511)
OP1: (24.902,123.439,58.360)
OP2: (24.723,120.877,58.396)
C2: (29.475,118.284,55.292)
C1': (29.787,120.606,56.024)
C3': (28.403,122.389,55.340)
O5': (26.848,121.960,57.781)
O4': (29.482,121.387,57.162)
C5': (27.823,123.012,57.731)
P: (25.513,122.112,58.626)
C4': (28.903,122.648,56.750)
C2': (29.454,121.441,54.787)
O2': (30.624,122.122,54.391)
N1: (29.109,119.307,56.156)
O4: (27.439,115.679,56.568)
O2: (30.297,118.424,54.403)
C6: (28.160,119.100,57.126)
C5: (27.565,117.923,57.313)
O3': (28.340,123.613,54.619)
C2: (28.163,118.007,51.851)
OP1: (27.017,125.486,53.659)
OP2: (25.848,123.362,54.495)
C4: (26.439,117.879,53.404)
O5': (27.198,123.324,52.402)
C3': (27.711,121.792,49.880)
C1': (28.988,120.192,51.038)
O4': (29.212,121.466,51.630)
C5': (28.280,123.699,51.545)
P: (27.004,124.011,53.825)
O2: (28.995,117.478,51.109)
C4': (28.745,122.510,50.734)
C2': (28.369,120.439,49.665)
O2': (29.404,120.516,48.714)
N1: (28.106,119.402,51.918)
N3: (27.313,117.272,52.602)
N4: (25.586,117.119,54.094)
C6: (27.231,120.013,52.771)
C5: (26.390,119.297,53.526)
O3': (27.462,122.453,48.646)
OP1: (27.017,125.486,53.659)
OP2: (25.848,123.362,54.495)
C4: (26.439,117.879,53.404)
O5': (27.198,123.324,52.402)
C3': (27.711,121.792,49.880)
C1': (28.988,120.192,51.038)
O4': (29.212,121.466,51.630)
C5': (28.280,123.699,51.545)
P: (27.004,124.011,53.825)
O2: (28.995,117.478,51.109)
C4': (28.745,122.510,50.734)
C2': (28.369,120.439,49.665)
O2': (29.404,120.516,48.714)
N1: (28.106,119.402,51.918)
N3: (27.313,117.272,52.602)
N4: (25.586,117.119,54.094)
C6: (27.231,120.013,52.771)
C5: (26.390,119.297,53.526)
O3': (27.462,122.453,48.646)
Image (generated by PyMOL):