Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02228:02229
Extra
PDB:
ATOM 1 O3' U A2227 54.295 60.488 69.069 1.00 49.96 O
ATOM 2 P U A2228 53.990 61.992 69.560 1.00 52.05 P
ATOM 3 OP1 U A2228 52.516 62.165 69.501 1.00 53.08 O
ATOM 4 OP2 U A2228 54.875 62.953 68.843 1.00 50.96 O
ATOM 5 O5' U A2228 54.408 61.985 71.095 1.00 47.83 O
ATOM 6 C5' U A2228 53.712 61.156 72.027 1.00 43.06 C
ATOM 7 C4' U A2228 54.490 61.051 73.310 1.00 40.74 C
ATOM 8 O4' U A2228 55.803 60.502 73.035 1.00 39.92 O
ATOM 9 C3' U A2228 54.824 62.350 74.016 1.00 38.28 C
ATOM 10 O3' U A2228 53.726 62.843 74.756 1.00 36.72 O
ATOM 11 C2' U A2228 55.940 61.907 74.940 1.00 38.33 C
ATOM 12 O2' U A2228 55.438 61.176 76.036 1.00 39.83 O
ATOM 13 C1' U A2228 56.703 60.941 74.035 1.00 39.44 C
ATOM 14 N1 U A2228 57.872 61.553 73.393 1.00 39.71 N
ATOM 15 C2 U A2228 59.044 61.608 74.128 1.00 39.99 C
ATOM 16 O2 U A2228 59.128 61.208 75.278 1.00 39.84 O
ATOM 17 N3 U A2228 60.113 62.156 73.472 1.00 40.05 N
ATOM 18 C4 U A2228 60.130 62.651 72.191 1.00 39.91 C
ATOM 19 O4 U A2228 61.195 63.021 71.711 1.00 40.51 O
ATOM 20 C5 U A2228 58.875 62.583 71.503 1.00 40.24 C
ATOM 21 C6 U A2228 57.816 62.048 72.111 1.00 39.61 C
ATOM 22 P C A2229 53.654 64.406 75.116 1.00 37.39 P
ATOM 23 OP1 C A2229 52.289 64.647 75.636 1.00 37.68 O
ATOM 24 OP2 C A2229 54.138 65.186 73.948 1.00 35.63 O
ATOM 25 O5' C A2229 54.698 64.567 76.314 1.00 34.97 O
TER
ATOM 1 O3' U B2228 53.726 62.843 74.756 1.00 36.72 O
ATOM 2 P C B2229 53.654 64.406 75.116 1.00 37.39 P
ATOM 3 OP1 C B2229 52.289 64.647 75.636 1.00 37.68 O
ATOM 4 OP2 C B2229 54.138 65.186 73.948 1.00 35.63 O
ATOM 5 O5' C B2229 54.698 64.567 76.314 1.00 34.97 O
ATOM 6 C5' C B2229 54.397 64.060 77.628 1.00 31.45 C
ATOM 7 C4' C B2229 55.633 64.058 78.494 1.00 31.56 C
ATOM 8 O4' C B2229 56.686 63.312 77.832 1.00 32.61 O
ATOM 9 C3' C B2229 56.291 65.400 78.748 1.00 33.41 C
ATOM 10 O3' C B2229 55.638 66.162 79.749 1.00 34.12 O
ATOM 11 C2' C B2229 57.697 64.993 79.165 1.00 32.57 C
ATOM 12 O2' C B2229 57.785 64.536 80.500 1.00 31.97 O
ATOM 13 C1' C B2229 57.952 63.832 78.208 1.00 32.32 C
ATOM 14 N1 C B2229 58.664 64.282 77.004 1.00 33.53 N
ATOM 15 C2 C B2229 60.061 64.437 77.068 1.00 34.64 C
ATOM 16 O2 C B2229 60.649 64.180 78.132 1.00 34.46 O
ATOM 17 N3 C B2229 60.730 64.866 75.973 1.00 34.69 N
ATOM 18 C4 C B2229 60.063 65.140 74.849 1.00 34.56 C
ATOM 19 N4 C B2229 60.764 65.573 73.801 1.00 33.62 N
ATOM 20 C5 C B2229 58.646 64.987 74.752 1.00 34.99 C
ATOM 21 C6 C B2229 57.992 64.558 75.843 1.00 33.97 C
ATOM 22 P U B2230 55.815 67.755 79.763 1.00 34.15 P
ATOM 23 OP1 U B2230 55.100 68.279 80.953 1.00 34.66 O
ATOM 24 OP2 U B2230 55.470 68.255 78.408 1.00 32.58 O
ATOM 25 O5' U B2230 57.369 67.969 80.006 1.00 31.12 O
TER
ATOM 2 P U A2228 53.990 61.992 69.560 1.00 52.05 P
ATOM 3 OP1 U A2228 52.516 62.165 69.501 1.00 53.08 O
ATOM 4 OP2 U A2228 54.875 62.953 68.843 1.00 50.96 O
ATOM 5 O5' U A2228 54.408 61.985 71.095 1.00 47.83 O
ATOM 6 C5' U A2228 53.712 61.156 72.027 1.00 43.06 C
ATOM 7 C4' U A2228 54.490 61.051 73.310 1.00 40.74 C
ATOM 8 O4' U A2228 55.803 60.502 73.035 1.00 39.92 O
ATOM 9 C3' U A2228 54.824 62.350 74.016 1.00 38.28 C
ATOM 10 O3' U A2228 53.726 62.843 74.756 1.00 36.72 O
ATOM 11 C2' U A2228 55.940 61.907 74.940 1.00 38.33 C
ATOM 12 O2' U A2228 55.438 61.176 76.036 1.00 39.83 O
ATOM 13 C1' U A2228 56.703 60.941 74.035 1.00 39.44 C
ATOM 14 N1 U A2228 57.872 61.553 73.393 1.00 39.71 N
ATOM 15 C2 U A2228 59.044 61.608 74.128 1.00 39.99 C
ATOM 16 O2 U A2228 59.128 61.208 75.278 1.00 39.84 O
ATOM 17 N3 U A2228 60.113 62.156 73.472 1.00 40.05 N
ATOM 18 C4 U A2228 60.130 62.651 72.191 1.00 39.91 C
ATOM 19 O4 U A2228 61.195 63.021 71.711 1.00 40.51 O
ATOM 20 C5 U A2228 58.875 62.583 71.503 1.00 40.24 C
ATOM 21 C6 U A2228 57.816 62.048 72.111 1.00 39.61 C
ATOM 22 P C A2229 53.654 64.406 75.116 1.00 37.39 P
ATOM 23 OP1 C A2229 52.289 64.647 75.636 1.00 37.68 O
ATOM 24 OP2 C A2229 54.138 65.186 73.948 1.00 35.63 O
ATOM 25 O5' C A2229 54.698 64.567 76.314 1.00 34.97 O
TER
ATOM 1 O3' U B2228 53.726 62.843 74.756 1.00 36.72 O
ATOM 2 P C B2229 53.654 64.406 75.116 1.00 37.39 P
ATOM 3 OP1 C B2229 52.289 64.647 75.636 1.00 37.68 O
ATOM 4 OP2 C B2229 54.138 65.186 73.948 1.00 35.63 O
ATOM 5 O5' C B2229 54.698 64.567 76.314 1.00 34.97 O
ATOM 6 C5' C B2229 54.397 64.060 77.628 1.00 31.45 C
ATOM 7 C4' C B2229 55.633 64.058 78.494 1.00 31.56 C
ATOM 8 O4' C B2229 56.686 63.312 77.832 1.00 32.61 O
ATOM 9 C3' C B2229 56.291 65.400 78.748 1.00 33.41 C
ATOM 10 O3' C B2229 55.638 66.162 79.749 1.00 34.12 O
ATOM 11 C2' C B2229 57.697 64.993 79.165 1.00 32.57 C
ATOM 12 O2' C B2229 57.785 64.536 80.500 1.00 31.97 O
ATOM 13 C1' C B2229 57.952 63.832 78.208 1.00 32.32 C
ATOM 14 N1 C B2229 58.664 64.282 77.004 1.00 33.53 N
ATOM 15 C2 C B2229 60.061 64.437 77.068 1.00 34.64 C
ATOM 16 O2 C B2229 60.649 64.180 78.132 1.00 34.46 O
ATOM 17 N3 C B2229 60.730 64.866 75.973 1.00 34.69 N
ATOM 18 C4 C B2229 60.063 65.140 74.849 1.00 34.56 C
ATOM 19 N4 C B2229 60.764 65.573 73.801 1.00 33.62 N
ATOM 20 C5 C B2229 58.646 64.987 74.752 1.00 34.99 C
ATOM 21 C6 C B2229 57.992 64.558 75.843 1.00 33.97 C
ATOM 22 P U B2230 55.815 67.755 79.763 1.00 34.15 P
ATOM 23 OP1 U B2230 55.100 68.279 80.953 1.00 34.66 O
ATOM 24 OP2 U B2230 55.470 68.255 78.408 1.00 32.58 O
ATOM 25 O5' U B2230 57.369 67.969 80.006 1.00 31.12 O
TER
Atoms:
C4: (60.130,62.651,72.191)
N3: (60.113,62.156,73.472)
OP1: (52.516,62.165,69.501)
OP2: (54.875,62.953,68.843)
C2: (59.044,61.608,74.128)
C1': (56.703,60.941,74.035)
C3': (54.824,62.350,74.016)
O5': (54.408,61.985,71.095)
O4': (55.803,60.502,73.035)
C5': (53.712,61.156,72.027)
P: (53.990,61.992,69.560)
C4': (54.490,61.051,73.310)
C2': (55.940,61.907,74.940)
O2': (55.438,61.176,76.036)
N1: (57.872,61.553,73.393)
O4: (61.195,63.021,71.711)
O2: (59.128,61.208,75.278)
C6: (57.816,62.048,72.111)
C5: (58.875,62.583,71.503)
O3': (53.726,62.843,74.756)
N3: (60.113,62.156,73.472)
OP1: (52.516,62.165,69.501)
OP2: (54.875,62.953,68.843)
C2: (59.044,61.608,74.128)
C1': (56.703,60.941,74.035)
C3': (54.824,62.350,74.016)
O5': (54.408,61.985,71.095)
O4': (55.803,60.502,73.035)
C5': (53.712,61.156,72.027)
P: (53.990,61.992,69.560)
C4': (54.490,61.051,73.310)
C2': (55.940,61.907,74.940)
O2': (55.438,61.176,76.036)
N1: (57.872,61.553,73.393)
O4: (61.195,63.021,71.711)
O2: (59.128,61.208,75.278)
C6: (57.816,62.048,72.111)
C5: (58.875,62.583,71.503)
O3': (53.726,62.843,74.756)
C2: (60.061,64.437,77.068)
OP1: (52.289,64.647,75.636)
OP2: (54.138,65.186,73.948)
C4: (60.063,65.140,74.849)
O5': (54.698,64.567,76.314)
C3': (56.291,65.400,78.748)
C1': (57.952,63.832,78.208)
O4': (56.686,63.312,77.832)
C5': (54.397,64.060,77.628)
P: (53.654,64.406,75.116)
O2: (60.649,64.180,78.132)
C4': (55.633,64.058,78.494)
C2': (57.697,64.993,79.165)
O2': (57.785,64.536,80.500)
N1: (58.664,64.282,77.004)
N3: (60.730,64.866,75.973)
N4: (60.764,65.573,73.801)
C6: (57.992,64.558,75.843)
C5: (58.646,64.987,74.752)
O3': (55.638,66.162,79.749)
OP1: (52.289,64.647,75.636)
OP2: (54.138,65.186,73.948)
C4: (60.063,65.140,74.849)
O5': (54.698,64.567,76.314)
C3': (56.291,65.400,78.748)
C1': (57.952,63.832,78.208)
O4': (56.686,63.312,77.832)
C5': (54.397,64.060,77.628)
P: (53.654,64.406,75.116)
O2: (60.649,64.180,78.132)
C4': (55.633,64.058,78.494)
C2': (57.697,64.993,79.165)
O2': (57.785,64.536,80.500)
N1: (58.664,64.282,77.004)
N3: (60.730,64.866,75.973)
N4: (60.764,65.573,73.801)
C6: (57.992,64.558,75.843)
C5: (58.646,64.987,74.752)
O3': (55.638,66.162,79.749)
Image (generated by PyMOL):