Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:025:026
Extra
PDB:
ATOM 1 O3' C A 24 47.025 124.408 47.454 1.00 24.22 O
ATOM 2 P U A 25 47.914 123.976 46.193 1.00 21.88 P
ATOM 3 OP1 U A 25 49.112 123.277 46.715 1.00 23.08 O
ATOM 4 OP2 U A 25 48.077 125.127 45.287 1.00 25.77 O
ATOM 5 O5' U A 25 47.018 122.912 45.425 1.00 26.65 O
ATOM 6 C5' U A 25 46.667 121.660 46.035 1.00 23.27 C
ATOM 7 C4' U A 25 45.580 120.985 45.240 1.00 23.28 C
ATOM 8 O4' U A 25 44.375 121.801 45.272 1.00 24.44 O
ATOM 9 C3' U A 25 45.836 120.804 43.753 1.00 23.26 C
ATOM 10 O3' U A 25 46.683 119.699 43.495 1.00 24.14 O
ATOM 11 C2' U A 25 44.420 120.601 43.229 1.00 25.24 C
ATOM 12 O2' U A 25 43.884 119.328 43.546 1.00 27.67 O
ATOM 13 C1' U A 25 43.660 121.634 44.056 1.00 23.99 C
ATOM 14 N1 U A 25 43.577 122.927 43.360 1.00 26.79 N
ATOM 15 C2 U A 25 42.568 123.073 42.427 1.00 28.68 C
ATOM 16 O2 U A 25 41.780 122.183 42.165 1.00 31.94 O
ATOM 17 N3 U A 25 42.522 124.295 41.804 1.00 30.42 N
ATOM 18 C4 U A 25 43.373 125.365 42.006 1.00 31.58 C
ATOM 19 O4 U A 25 43.184 126.413 41.382 1.00 30.14 O
ATOM 20 C5 U A 25 44.402 125.136 42.983 1.00 29.14 C
ATOM 21 C6 U A 25 44.465 123.958 43.613 1.00 26.91 C
ATOM 22 P C A 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 23 OP1 C A 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 24 OP2 C A 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 25 O5' C A 26 46.182 119.180 41.077 1.00 27.05 O
TER
ATOM 1 O3' U B 25 46.683 119.699 43.495 1.00 24.14 O
ATOM 2 P C B 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 3 OP1 C B 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 4 OP2 C B 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 5 O5' C B 26 46.182 119.180 41.077 1.00 27.05 O
ATOM 6 C5' C B 26 45.470 117.944 41.220 1.00 25.14 C
ATOM 7 C4' C B 26 44.298 117.910 40.277 1.00 25.56 C
ATOM 8 O4' C B 26 43.412 119.026 40.574 1.00 24.56 O
ATOM 9 C3' C B 26 44.619 118.110 38.805 1.00 27.22 C
ATOM 10 O3' C B 26 45.108 116.948 38.164 1.00 30.54 O
ATOM 11 C2' C B 26 43.273 118.544 38.257 1.00 28.16 C
ATOM 12 O2' C B 26 42.368 117.465 38.136 1.00 27.58 O
ATOM 13 C1' C B 26 42.804 119.478 39.371 1.00 26.55 C
ATOM 14 N1 C B 26 43.218 120.872 39.113 1.00 27.12 N
ATOM 15 C2 C B 26 42.436 121.641 38.258 1.00 27.19 C
ATOM 16 O2 C B 26 41.465 121.110 37.697 1.00 27.79 O
ATOM 17 N3 C B 26 42.759 122.938 38.049 1.00 28.05 N
ATOM 18 C4 C B 26 43.833 123.464 38.644 1.00 29.15 C
ATOM 19 N4 C B 26 44.096 124.760 38.425 1.00 27.42 N
ATOM 20 C5 C B 26 44.679 122.690 39.493 1.00 24.54 C
ATOM 21 C6 C B 26 44.336 121.411 39.699 1.00 28.11 C
ATOM 22 P A B 27 46.130 117.097 36.930 1.00 34.48 P
ATOM 23 OP1 A B 27 46.603 115.729 36.624 1.00 34.83 O
ATOM 24 OP2 A B 27 47.117 118.168 37.209 1.00 33.35 O
ATOM 25 O5' A B 27 45.217 117.626 35.739 1.00 35.19 O
TER
ATOM 2 P U A 25 47.914 123.976 46.193 1.00 21.88 P
ATOM 3 OP1 U A 25 49.112 123.277 46.715 1.00 23.08 O
ATOM 4 OP2 U A 25 48.077 125.127 45.287 1.00 25.77 O
ATOM 5 O5' U A 25 47.018 122.912 45.425 1.00 26.65 O
ATOM 6 C5' U A 25 46.667 121.660 46.035 1.00 23.27 C
ATOM 7 C4' U A 25 45.580 120.985 45.240 1.00 23.28 C
ATOM 8 O4' U A 25 44.375 121.801 45.272 1.00 24.44 O
ATOM 9 C3' U A 25 45.836 120.804 43.753 1.00 23.26 C
ATOM 10 O3' U A 25 46.683 119.699 43.495 1.00 24.14 O
ATOM 11 C2' U A 25 44.420 120.601 43.229 1.00 25.24 C
ATOM 12 O2' U A 25 43.884 119.328 43.546 1.00 27.67 O
ATOM 13 C1' U A 25 43.660 121.634 44.056 1.00 23.99 C
ATOM 14 N1 U A 25 43.577 122.927 43.360 1.00 26.79 N
ATOM 15 C2 U A 25 42.568 123.073 42.427 1.00 28.68 C
ATOM 16 O2 U A 25 41.780 122.183 42.165 1.00 31.94 O
ATOM 17 N3 U A 25 42.522 124.295 41.804 1.00 30.42 N
ATOM 18 C4 U A 25 43.373 125.365 42.006 1.00 31.58 C
ATOM 19 O4 U A 25 43.184 126.413 41.382 1.00 30.14 O
ATOM 20 C5 U A 25 44.402 125.136 42.983 1.00 29.14 C
ATOM 21 C6 U A 25 44.465 123.958 43.613 1.00 26.91 C
ATOM 22 P C A 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 23 OP1 C A 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 24 OP2 C A 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 25 O5' C A 26 46.182 119.180 41.077 1.00 27.05 O
TER
ATOM 1 O3' U B 25 46.683 119.699 43.495 1.00 24.14 O
ATOM 2 P C B 26 47.381 119.545 42.055 1.00 26.15 P
ATOM 3 OP1 C B 26 48.280 118.368 42.154 1.00 27.19 O
ATOM 4 OP2 C B 26 47.926 120.850 41.612 1.00 26.06 O
ATOM 5 O5' C B 26 46.182 119.180 41.077 1.00 27.05 O
ATOM 6 C5' C B 26 45.470 117.944 41.220 1.00 25.14 C
ATOM 7 C4' C B 26 44.298 117.910 40.277 1.00 25.56 C
ATOM 8 O4' C B 26 43.412 119.026 40.574 1.00 24.56 O
ATOM 9 C3' C B 26 44.619 118.110 38.805 1.00 27.22 C
ATOM 10 O3' C B 26 45.108 116.948 38.164 1.00 30.54 O
ATOM 11 C2' C B 26 43.273 118.544 38.257 1.00 28.16 C
ATOM 12 O2' C B 26 42.368 117.465 38.136 1.00 27.58 O
ATOM 13 C1' C B 26 42.804 119.478 39.371 1.00 26.55 C
ATOM 14 N1 C B 26 43.218 120.872 39.113 1.00 27.12 N
ATOM 15 C2 C B 26 42.436 121.641 38.258 1.00 27.19 C
ATOM 16 O2 C B 26 41.465 121.110 37.697 1.00 27.79 O
ATOM 17 N3 C B 26 42.759 122.938 38.049 1.00 28.05 N
ATOM 18 C4 C B 26 43.833 123.464 38.644 1.00 29.15 C
ATOM 19 N4 C B 26 44.096 124.760 38.425 1.00 27.42 N
ATOM 20 C5 C B 26 44.679 122.690 39.493 1.00 24.54 C
ATOM 21 C6 C B 26 44.336 121.411 39.699 1.00 28.11 C
ATOM 22 P A B 27 46.130 117.097 36.930 1.00 34.48 P
ATOM 23 OP1 A B 27 46.603 115.729 36.624 1.00 34.83 O
ATOM 24 OP2 A B 27 47.117 118.168 37.209 1.00 33.35 O
ATOM 25 O5' A B 27 45.217 117.626 35.739 1.00 35.19 O
TER
Atoms:
C4: (43.373,125.365,42.006)
N3: (42.522,124.295,41.804)
OP1: (49.112,123.277,46.715)
OP2: (48.077,125.127,45.287)
C2: (42.568,123.073,42.427)
C1': (43.660,121.634,44.056)
C3': (45.836,120.804,43.753)
O5': (47.018,122.912,45.425)
O4': (44.375,121.801,45.272)
C5': (46.667,121.660,46.035)
P: (47.914,123.976,46.193)
C4': (45.580,120.985,45.240)
C2': (44.420,120.601,43.229)
O2': (43.884,119.328,43.546)
N1: (43.577,122.927,43.360)
O4: (43.184,126.413,41.382)
O2: (41.780,122.183,42.165)
C6: (44.465,123.958,43.613)
C5: (44.402,125.136,42.983)
O3': (46.683,119.699,43.495)
N3: (42.522,124.295,41.804)
OP1: (49.112,123.277,46.715)
OP2: (48.077,125.127,45.287)
C2: (42.568,123.073,42.427)
C1': (43.660,121.634,44.056)
C3': (45.836,120.804,43.753)
O5': (47.018,122.912,45.425)
O4': (44.375,121.801,45.272)
C5': (46.667,121.660,46.035)
P: (47.914,123.976,46.193)
C4': (45.580,120.985,45.240)
C2': (44.420,120.601,43.229)
O2': (43.884,119.328,43.546)
N1: (43.577,122.927,43.360)
O4: (43.184,126.413,41.382)
O2: (41.780,122.183,42.165)
C6: (44.465,123.958,43.613)
C5: (44.402,125.136,42.983)
O3': (46.683,119.699,43.495)
C2: (42.436,121.641,38.258)
OP1: (48.280,118.368,42.154)
OP2: (47.926,120.850,41.612)
C4: (43.833,123.464,38.644)
O5': (46.182,119.180,41.077)
C3': (44.619,118.110,38.805)
C1': (42.804,119.478,39.371)
O4': (43.412,119.026,40.574)
C5': (45.470,117.944,41.220)
P: (47.381,119.545,42.055)
O2: (41.465,121.110,37.697)
C4': (44.298,117.910,40.277)
C2': (43.273,118.544,38.257)
O2': (42.368,117.465,38.136)
N1: (43.218,120.872,39.113)
N3: (42.759,122.938,38.049)
N4: (44.096,124.760,38.425)
C6: (44.336,121.411,39.699)
C5: (44.679,122.690,39.493)
O3': (45.108,116.948,38.164)
OP1: (48.280,118.368,42.154)
OP2: (47.926,120.850,41.612)
C4: (43.833,123.464,38.644)
O5': (46.182,119.180,41.077)
C3': (44.619,118.110,38.805)
C1': (42.804,119.478,39.371)
O4': (43.412,119.026,40.574)
C5': (45.470,117.944,41.220)
P: (47.381,119.545,42.055)
O2: (41.465,121.110,37.697)
C4': (44.298,117.910,40.277)
C2': (43.273,118.544,38.257)
O2': (42.368,117.465,38.136)
N1: (43.218,120.872,39.113)
N3: (42.759,122.938,38.049)
N4: (44.096,124.760,38.425)
C6: (44.336,121.411,39.699)
C5: (44.679,122.690,39.493)
O3': (45.108,116.948,38.164)
Image (generated by PyMOL):