Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GID:A28:A29
Extra
PDB:
ATOM 1 O3' U A 27 32.136 66.917 54.814 0.00 83.82 O
ATOM 2 P U A 28 30.824 67.699 55.313 1.00 89.31 P
ATOM 3 OP1 U A 28 31.021 69.175 55.139 1.00 88.63 O
ATOM 4 OP2 U A 28 30.491 67.155 56.673 1.00 90.05 O
ATOM 5 O5' U A 28 29.697 67.230 54.274 1.00 91.17 O
ATOM 6 C5' U A 28 29.628 67.775 52.947 1.00 91.10 C
ATOM 7 C4' U A 28 28.307 68.493 52.745 1.00 89.75 C
ATOM 8 O4' U A 28 27.192 67.547 52.618 1.00 89.62 O
ATOM 9 C3' U A 28 27.891 69.337 53.928 1.00 87.73 C
ATOM 10 O3' U A 28 28.573 70.552 54.027 1.00 86.97 O
ATOM 11 C2' U A 28 26.401 69.511 53.698 1.00 86.68 C
ATOM 12 O2' U A 28 26.096 70.469 52.704 1.00 83.89 O
ATOM 13 C1' U A 28 26.021 68.098 53.242 1.00 88.06 C
ATOM 14 N1 U A 28 25.686 67.291 54.435 1.00 85.40 N
ATOM 15 C2 U A 28 24.358 67.259 54.858 1.00 83.38 C
ATOM 16 O2 U A 28 23.450 67.839 54.278 1.00 82.94 O
ATOM 17 N3 U A 28 24.132 66.520 55.993 1.00 82.16 N
ATOM 18 C4 U A 28 25.069 65.815 56.732 1.00 82.42 C
ATOM 19 O4 U A 28 24.713 65.188 57.730 1.00 81.52 O
ATOM 20 C5 U A 28 26.406 65.894 56.231 1.00 83.92 C
ATOM 21 C6 U A 28 26.664 66.609 55.129 1.00 84.73 C
ATOM 22 P C A 29 28.593 71.282 55.449 1.00 89.01 P
ATOM 23 OP1 C A 29 29.563 72.414 55.374 1.00 90.81 O
ATOM 24 OP2 C A 29 28.779 70.223 56.500 1.00 90.09 O
ATOM 25 O5' C A 29 27.106 71.860 55.568 1.00 85.70 O
TER
ATOM 1 O3' U B 28 28.573 70.552 54.027 1.00 86.97 O
ATOM 2 P C B 29 28.593 71.282 55.449 1.00 89.01 P
ATOM 3 OP1 C B 29 29.563 72.414 55.374 1.00 90.81 O
ATOM 4 OP2 C B 29 28.779 70.223 56.500 1.00 90.09 O
ATOM 5 O5' C B 29 27.106 71.860 55.568 1.00 85.70 O
ATOM 6 C5' C B 29 26.592 72.747 54.576 1.00 81.29 C
ATOM 7 C4' C B 29 25.084 72.848 54.687 1.00 78.04 C
ATOM 8 O4' C B 29 24.506 71.518 54.591 1.00 76.82 O
ATOM 9 C3' C B 29 24.548 73.410 56.000 1.00 74.78 C
ATOM 10 O3' C B 29 24.431 74.818 55.903 1.00 72.98 O
ATOM 11 C2' C B 29 23.148 72.820 56.061 1.00 74.18 C
ATOM 12 O2' C B 29 22.227 73.563 55.288 1.00 72.14 O
ATOM 13 C1' C B 29 23.372 71.433 55.443 1.00 74.89 C
ATOM 14 N1 C B 29 23.630 70.372 56.437 1.00 72.00 N
ATOM 15 C2 C B 29 22.593 69.988 57.318 1.00 71.26 C
ATOM 16 O2 C B 29 21.474 70.566 57.256 1.00 67.54 O
ATOM 17 N3 C B 29 22.831 69.001 58.215 1.00 71.07 N
ATOM 18 C4 C B 29 24.028 68.409 58.260 1.00 69.58 C
ATOM 19 N4 C B 29 24.202 67.438 59.157 1.00 69.48 N
ATOM 20 C5 C B 29 25.094 68.787 57.389 1.00 69.75 C
ATOM 21 C6 C B 29 24.855 69.761 56.504 1.00 70.29 C
ATOM 22 P A B 30 24.381 75.703 57.236 1.00 73.20 P
ATOM 23 OP1 A B 30 24.286 77.138 56.839 1.00 74.17 O
ATOM 24 OP2 A B 30 25.500 75.238 58.121 1.00 68.95 O
ATOM 25 O5' A B 30 22.986 75.324 57.902 1.00 74.69 O
TER
ATOM 2 P U A 28 30.824 67.699 55.313 1.00 89.31 P
ATOM 3 OP1 U A 28 31.021 69.175 55.139 1.00 88.63 O
ATOM 4 OP2 U A 28 30.491 67.155 56.673 1.00 90.05 O
ATOM 5 O5' U A 28 29.697 67.230 54.274 1.00 91.17 O
ATOM 6 C5' U A 28 29.628 67.775 52.947 1.00 91.10 C
ATOM 7 C4' U A 28 28.307 68.493 52.745 1.00 89.75 C
ATOM 8 O4' U A 28 27.192 67.547 52.618 1.00 89.62 O
ATOM 9 C3' U A 28 27.891 69.337 53.928 1.00 87.73 C
ATOM 10 O3' U A 28 28.573 70.552 54.027 1.00 86.97 O
ATOM 11 C2' U A 28 26.401 69.511 53.698 1.00 86.68 C
ATOM 12 O2' U A 28 26.096 70.469 52.704 1.00 83.89 O
ATOM 13 C1' U A 28 26.021 68.098 53.242 1.00 88.06 C
ATOM 14 N1 U A 28 25.686 67.291 54.435 1.00 85.40 N
ATOM 15 C2 U A 28 24.358 67.259 54.858 1.00 83.38 C
ATOM 16 O2 U A 28 23.450 67.839 54.278 1.00 82.94 O
ATOM 17 N3 U A 28 24.132 66.520 55.993 1.00 82.16 N
ATOM 18 C4 U A 28 25.069 65.815 56.732 1.00 82.42 C
ATOM 19 O4 U A 28 24.713 65.188 57.730 1.00 81.52 O
ATOM 20 C5 U A 28 26.406 65.894 56.231 1.00 83.92 C
ATOM 21 C6 U A 28 26.664 66.609 55.129 1.00 84.73 C
ATOM 22 P C A 29 28.593 71.282 55.449 1.00 89.01 P
ATOM 23 OP1 C A 29 29.563 72.414 55.374 1.00 90.81 O
ATOM 24 OP2 C A 29 28.779 70.223 56.500 1.00 90.09 O
ATOM 25 O5' C A 29 27.106 71.860 55.568 1.00 85.70 O
TER
ATOM 1 O3' U B 28 28.573 70.552 54.027 1.00 86.97 O
ATOM 2 P C B 29 28.593 71.282 55.449 1.00 89.01 P
ATOM 3 OP1 C B 29 29.563 72.414 55.374 1.00 90.81 O
ATOM 4 OP2 C B 29 28.779 70.223 56.500 1.00 90.09 O
ATOM 5 O5' C B 29 27.106 71.860 55.568 1.00 85.70 O
ATOM 6 C5' C B 29 26.592 72.747 54.576 1.00 81.29 C
ATOM 7 C4' C B 29 25.084 72.848 54.687 1.00 78.04 C
ATOM 8 O4' C B 29 24.506 71.518 54.591 1.00 76.82 O
ATOM 9 C3' C B 29 24.548 73.410 56.000 1.00 74.78 C
ATOM 10 O3' C B 29 24.431 74.818 55.903 1.00 72.98 O
ATOM 11 C2' C B 29 23.148 72.820 56.061 1.00 74.18 C
ATOM 12 O2' C B 29 22.227 73.563 55.288 1.00 72.14 O
ATOM 13 C1' C B 29 23.372 71.433 55.443 1.00 74.89 C
ATOM 14 N1 C B 29 23.630 70.372 56.437 1.00 72.00 N
ATOM 15 C2 C B 29 22.593 69.988 57.318 1.00 71.26 C
ATOM 16 O2 C B 29 21.474 70.566 57.256 1.00 67.54 O
ATOM 17 N3 C B 29 22.831 69.001 58.215 1.00 71.07 N
ATOM 18 C4 C B 29 24.028 68.409 58.260 1.00 69.58 C
ATOM 19 N4 C B 29 24.202 67.438 59.157 1.00 69.48 N
ATOM 20 C5 C B 29 25.094 68.787 57.389 1.00 69.75 C
ATOM 21 C6 C B 29 24.855 69.761 56.504 1.00 70.29 C
ATOM 22 P A B 30 24.381 75.703 57.236 1.00 73.20 P
ATOM 23 OP1 A B 30 24.286 77.138 56.839 1.00 74.17 O
ATOM 24 OP2 A B 30 25.500 75.238 58.121 1.00 68.95 O
ATOM 25 O5' A B 30 22.986 75.324 57.902 1.00 74.69 O
TER
Atoms:
C4: (25.069,65.815,56.732)
N3: (24.132,66.520,55.993)
OP1: (31.021,69.175,55.139)
OP2: (30.491,67.155,56.673)
C2: (24.358,67.259,54.858)
C1': (26.021,68.098,53.242)
C3': (27.891,69.337,53.928)
O5': (29.697,67.230,54.274)
O4': (27.192,67.547,52.618)
C5': (29.628,67.775,52.947)
P: (30.824,67.699,55.313)
C4': (28.307,68.493,52.745)
C2': (26.401,69.511,53.698)
O2': (26.096,70.469,52.704)
N1: (25.686,67.291,54.435)
O4: (24.713,65.188,57.730)
O2: (23.450,67.839,54.278)
C6: (26.664,66.609,55.129)
C5: (26.406,65.894,56.231)
O3': (28.573,70.552,54.027)
N3: (24.132,66.520,55.993)
OP1: (31.021,69.175,55.139)
OP2: (30.491,67.155,56.673)
C2: (24.358,67.259,54.858)
C1': (26.021,68.098,53.242)
C3': (27.891,69.337,53.928)
O5': (29.697,67.230,54.274)
O4': (27.192,67.547,52.618)
C5': (29.628,67.775,52.947)
P: (30.824,67.699,55.313)
C4': (28.307,68.493,52.745)
C2': (26.401,69.511,53.698)
O2': (26.096,70.469,52.704)
N1: (25.686,67.291,54.435)
O4: (24.713,65.188,57.730)
O2: (23.450,67.839,54.278)
C6: (26.664,66.609,55.129)
C5: (26.406,65.894,56.231)
O3': (28.573,70.552,54.027)
C2: (22.593,69.988,57.318)
OP1: (29.563,72.414,55.374)
OP2: (28.779,70.223,56.500)
C4: (24.028,68.409,58.260)
O5': (27.106,71.860,55.568)
C3': (24.548,73.410,56.000)
C1': (23.372,71.433,55.443)
O4': (24.506,71.518,54.591)
C5': (26.592,72.747,54.576)
P: (28.593,71.282,55.449)
O2: (21.474,70.566,57.256)
C4': (25.084,72.848,54.687)
C2': (23.148,72.820,56.061)
O2': (22.227,73.563,55.288)
N1: (23.630,70.372,56.437)
N3: (22.831,69.001,58.215)
N4: (24.202,67.438,59.157)
C6: (24.855,69.761,56.504)
C5: (25.094,68.787,57.389)
O3': (24.431,74.818,55.903)
OP1: (29.563,72.414,55.374)
OP2: (28.779,70.223,56.500)
C4: (24.028,68.409,58.260)
O5': (27.106,71.860,55.568)
C3': (24.548,73.410,56.000)
C1': (23.372,71.433,55.443)
O4': (24.506,71.518,54.591)
C5': (26.592,72.747,54.576)
P: (28.593,71.282,55.449)
O2: (21.474,70.566,57.256)
C4': (25.084,72.848,54.687)
C2': (23.148,72.820,56.061)
O2': (22.227,73.563,55.288)
N1: (23.630,70.372,56.437)
N3: (22.831,69.001,58.215)
N4: (24.202,67.438,59.157)
C6: (24.855,69.761,56.504)
C5: (25.094,68.787,57.389)
O3': (24.431,74.818,55.903)
Image (generated by PyMOL):