Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0604:0605
Extra
PDB:
ATOM 1 O3' G A 603 17.692 115.560 108.284 1.00 51.10 O
ATOM 2 P U A 604 19.245 115.154 108.309 1.00 52.01 P
ATOM 3 OP1 U A 604 19.485 114.329 109.519 1.00 53.99 O
ATOM 4 OP2 U A 604 20.053 116.385 108.086 1.00 52.51 O
ATOM 5 O5' U A 604 19.395 114.183 107.060 1.00 51.89 O
ATOM 6 C5' U A 604 18.756 112.905 107.051 1.00 49.09 C
ATOM 7 C4' U A 604 18.958 112.232 105.721 1.00 48.79 C
ATOM 8 O4' U A 604 18.269 112.982 104.688 1.00 48.27 O
ATOM 9 C3' U A 604 20.390 112.173 105.225 1.00 49.47 C
ATOM 10 O3' U A 604 21.142 111.129 105.832 1.00 50.59 O
ATOM 11 C2' U A 604 20.190 111.975 103.734 1.00 49.34 C
ATOM 12 O2' U A 604 19.799 110.658 103.418 1.00 51.64 O
ATOM 13 C1' U A 604 19.001 112.900 103.475 1.00 48.32 C
ATOM 14 N1 U A 604 19.396 114.260 103.073 1.00 47.77 N
ATOM 15 C2 U A 604 19.697 114.482 101.732 1.00 46.66 C
ATOM 16 O2 U A 604 19.677 113.599 100.888 1.00 45.63 O
ATOM 17 N3 U A 604 20.023 115.779 101.418 1.00 45.53 N
ATOM 18 C4 U A 604 20.088 116.849 102.283 1.00 45.57 C
ATOM 19 O4 U A 604 20.394 117.960 101.849 1.00 45.05 O
ATOM 20 C5 U A 604 19.780 116.539 103.648 1.00 47.04 C
ATOM 21 C6 U A 604 19.455 115.289 103.988 1.00 46.68 C
ATOM 22 P C A 605 22.720 111.337 106.096 1.00 52.15 P
ATOM 23 OP1 C A 605 23.231 110.152 106.842 1.00 50.43 O
ATOM 24 OP2 C A 605 22.950 112.704 106.636 1.00 49.75 O
ATOM 25 O5' C A 605 23.341 111.288 104.633 1.00 50.44 O
TER
ATOM 1 O3' U B 604 21.142 111.129 105.832 1.00 50.59 O
ATOM 2 P C B 605 22.720 111.337 106.096 1.00 52.15 P
ATOM 3 OP1 C B 605 23.231 110.152 106.842 1.00 50.43 O
ATOM 4 OP2 C B 605 22.950 112.704 106.636 1.00 49.75 O
ATOM 5 O5' C B 605 23.341 111.288 104.633 1.00 50.44 O
ATOM 6 C5' C B 605 23.337 110.075 103.882 1.00 46.14 C
ATOM 7 C4' C B 605 23.815 110.338 102.486 1.00 44.92 C
ATOM 8 O4' C B 605 22.897 111.257 101.838 1.00 44.33 O
ATOM 9 C3' C B 605 25.147 111.055 102.361 1.00 43.60 C
ATOM 10 O3' C B 605 26.254 110.187 102.563 1.00 43.52 O
ATOM 11 C2' C B 605 25.062 111.588 100.940 1.00 41.23 C
ATOM 12 O2' C B 605 25.251 110.590 99.966 1.00 42.60 O
ATOM 13 C1' C B 605 23.607 112.039 100.891 1.00 40.25 C
ATOM 14 N1 C B 605 23.485 113.453 101.262 1.00 39.39 N
ATOM 15 C2 C B 605 23.675 114.417 100.268 1.00 37.53 C
ATOM 16 O2 C B 605 23.922 114.045 99.110 1.00 36.46 O
ATOM 17 N3 C B 605 23.597 115.725 100.595 1.00 37.65 N
ATOM 18 C4 C B 605 23.360 116.084 101.857 1.00 35.97 C
ATOM 19 N4 C B 605 23.346 117.382 102.139 1.00 32.01 N
ATOM 20 C5 C B 605 23.142 115.122 102.888 1.00 36.87 C
ATOM 21 C6 C B 605 23.210 113.830 102.549 1.00 36.93 C
ATOM 22 P G B 606 27.613 110.768 103.199 1.00 42.64 P
ATOM 23 OP1 G B 606 28.549 109.610 103.284 1.00 45.83 O
ATOM 24 OP2 G B 606 27.308 111.548 104.422 1.00 41.85 O
ATOM 25 O5' G B 606 28.148 111.788 102.093 1.00 44.96 O
TER
ATOM 2 P U A 604 19.245 115.154 108.309 1.00 52.01 P
ATOM 3 OP1 U A 604 19.485 114.329 109.519 1.00 53.99 O
ATOM 4 OP2 U A 604 20.053 116.385 108.086 1.00 52.51 O
ATOM 5 O5' U A 604 19.395 114.183 107.060 1.00 51.89 O
ATOM 6 C5' U A 604 18.756 112.905 107.051 1.00 49.09 C
ATOM 7 C4' U A 604 18.958 112.232 105.721 1.00 48.79 C
ATOM 8 O4' U A 604 18.269 112.982 104.688 1.00 48.27 O
ATOM 9 C3' U A 604 20.390 112.173 105.225 1.00 49.47 C
ATOM 10 O3' U A 604 21.142 111.129 105.832 1.00 50.59 O
ATOM 11 C2' U A 604 20.190 111.975 103.734 1.00 49.34 C
ATOM 12 O2' U A 604 19.799 110.658 103.418 1.00 51.64 O
ATOM 13 C1' U A 604 19.001 112.900 103.475 1.00 48.32 C
ATOM 14 N1 U A 604 19.396 114.260 103.073 1.00 47.77 N
ATOM 15 C2 U A 604 19.697 114.482 101.732 1.00 46.66 C
ATOM 16 O2 U A 604 19.677 113.599 100.888 1.00 45.63 O
ATOM 17 N3 U A 604 20.023 115.779 101.418 1.00 45.53 N
ATOM 18 C4 U A 604 20.088 116.849 102.283 1.00 45.57 C
ATOM 19 O4 U A 604 20.394 117.960 101.849 1.00 45.05 O
ATOM 20 C5 U A 604 19.780 116.539 103.648 1.00 47.04 C
ATOM 21 C6 U A 604 19.455 115.289 103.988 1.00 46.68 C
ATOM 22 P C A 605 22.720 111.337 106.096 1.00 52.15 P
ATOM 23 OP1 C A 605 23.231 110.152 106.842 1.00 50.43 O
ATOM 24 OP2 C A 605 22.950 112.704 106.636 1.00 49.75 O
ATOM 25 O5' C A 605 23.341 111.288 104.633 1.00 50.44 O
TER
ATOM 1 O3' U B 604 21.142 111.129 105.832 1.00 50.59 O
ATOM 2 P C B 605 22.720 111.337 106.096 1.00 52.15 P
ATOM 3 OP1 C B 605 23.231 110.152 106.842 1.00 50.43 O
ATOM 4 OP2 C B 605 22.950 112.704 106.636 1.00 49.75 O
ATOM 5 O5' C B 605 23.341 111.288 104.633 1.00 50.44 O
ATOM 6 C5' C B 605 23.337 110.075 103.882 1.00 46.14 C
ATOM 7 C4' C B 605 23.815 110.338 102.486 1.00 44.92 C
ATOM 8 O4' C B 605 22.897 111.257 101.838 1.00 44.33 O
ATOM 9 C3' C B 605 25.147 111.055 102.361 1.00 43.60 C
ATOM 10 O3' C B 605 26.254 110.187 102.563 1.00 43.52 O
ATOM 11 C2' C B 605 25.062 111.588 100.940 1.00 41.23 C
ATOM 12 O2' C B 605 25.251 110.590 99.966 1.00 42.60 O
ATOM 13 C1' C B 605 23.607 112.039 100.891 1.00 40.25 C
ATOM 14 N1 C B 605 23.485 113.453 101.262 1.00 39.39 N
ATOM 15 C2 C B 605 23.675 114.417 100.268 1.00 37.53 C
ATOM 16 O2 C B 605 23.922 114.045 99.110 1.00 36.46 O
ATOM 17 N3 C B 605 23.597 115.725 100.595 1.00 37.65 N
ATOM 18 C4 C B 605 23.360 116.084 101.857 1.00 35.97 C
ATOM 19 N4 C B 605 23.346 117.382 102.139 1.00 32.01 N
ATOM 20 C5 C B 605 23.142 115.122 102.888 1.00 36.87 C
ATOM 21 C6 C B 605 23.210 113.830 102.549 1.00 36.93 C
ATOM 22 P G B 606 27.613 110.768 103.199 1.00 42.64 P
ATOM 23 OP1 G B 606 28.549 109.610 103.284 1.00 45.83 O
ATOM 24 OP2 G B 606 27.308 111.548 104.422 1.00 41.85 O
ATOM 25 O5' G B 606 28.148 111.788 102.093 1.00 44.96 O
TER
Atoms:
C4: (20.088,116.849,102.283)
N3: (20.023,115.779,101.418)
OP1: (19.485,114.329,109.519)
OP2: (20.053,116.385,108.086)
C2: (19.697,114.482,101.732)
C1': (19.001,112.900,103.475)
C3': (20.390,112.173,105.225)
O5': (19.395,114.183,107.060)
O4': (18.269,112.982,104.688)
C5': (18.756,112.905,107.051)
P: (19.245,115.154,108.309)
C4': (18.958,112.232,105.721)
C2': (20.190,111.975,103.734)
O2': (19.799,110.658,103.418)
N1: (19.396,114.260,103.073)
O4: (20.394,117.960,101.849)
O2: (19.677,113.599,100.888)
C6: (19.455,115.289,103.988)
C5: (19.780,116.539,103.648)
O3': (21.142,111.129,105.832)
N3: (20.023,115.779,101.418)
OP1: (19.485,114.329,109.519)
OP2: (20.053,116.385,108.086)
C2: (19.697,114.482,101.732)
C1': (19.001,112.900,103.475)
C3': (20.390,112.173,105.225)
O5': (19.395,114.183,107.060)
O4': (18.269,112.982,104.688)
C5': (18.756,112.905,107.051)
P: (19.245,115.154,108.309)
C4': (18.958,112.232,105.721)
C2': (20.190,111.975,103.734)
O2': (19.799,110.658,103.418)
N1: (19.396,114.260,103.073)
O4: (20.394,117.960,101.849)
O2: (19.677,113.599,100.888)
C6: (19.455,115.289,103.988)
C5: (19.780,116.539,103.648)
O3': (21.142,111.129,105.832)
C2: (23.675,114.417,100.268)
OP1: (23.231,110.152,106.842)
OP2: (22.950,112.704,106.636)
C4: (23.360,116.084,101.857)
O5': (23.341,111.288,104.633)
C3': (25.147,111.055,102.361)
C1': (23.607,112.039,100.891)
O4': (22.897,111.257,101.838)
C5': (23.337,110.075,103.882)
P: (22.720,111.337,106.096)
O2: (23.922,114.045,99.110)
C4': (23.815,110.338,102.486)
C2': (25.062,111.588,100.940)
O2': (25.251,110.590,99.966)
N1: (23.485,113.453,101.262)
N3: (23.597,115.725,100.595)
N4: (23.346,117.382,102.139)
C6: (23.210,113.830,102.549)
C5: (23.142,115.122,102.888)
O3': (26.254,110.187,102.563)
OP1: (23.231,110.152,106.842)
OP2: (22.950,112.704,106.636)
C4: (23.360,116.084,101.857)
O5': (23.341,111.288,104.633)
C3': (25.147,111.055,102.361)
C1': (23.607,112.039,100.891)
O4': (22.897,111.257,101.838)
C5': (23.337,110.075,103.882)
P: (22.720,111.337,106.096)
O2: (23.922,114.045,99.110)
C4': (23.815,110.338,102.486)
C2': (25.062,111.588,100.940)
O2': (25.251,110.590,99.966)
N1: (23.485,113.453,101.262)
N3: (23.597,115.725,100.595)
N4: (23.346,117.382,102.139)
C6: (23.210,113.830,102.549)
C5: (23.142,115.122,102.888)
O3': (26.254,110.187,102.563)
Image (generated by PyMOL):