Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2355:A2356
Extra
PDB:
ATOM 1 O3' A A2354 69.844 107.813 151.921 1.00 65.49 O
ATOM 2 P U A2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 3 OP1 U A2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 4 OP2 U A2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 5 O5' U A2355 71.290 107.357 149.914 1.00 61.99 O
ATOM 6 C5' U A2355 72.025 108.586 149.737 1.00 60.20 C
ATOM 7 C4' U A2355 73.471 108.279 149.429 1.00 59.47 C
ATOM 8 O4' U A2355 74.048 107.489 150.504 1.00 58.59 O
ATOM 9 C3' U A2355 73.673 107.400 148.214 1.00 59.19 C
ATOM 10 O3' U A2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 11 C2' U A2355 75.041 106.789 148.477 1.00 58.53 C
ATOM 12 O2' U A2355 76.094 107.706 148.263 1.00 57.68 O
ATOM 13 C1' U A2355 74.940 106.519 149.971 1.00 57.88 C
ATOM 14 N1 U A2355 74.394 105.183 150.254 1.00 58.07 N
ATOM 15 C2 U A2355 75.260 104.101 150.259 1.00 58.51 C
ATOM 16 O2 U A2355 76.456 104.193 149.998 1.00 60.19 O
ATOM 17 N3 U A2355 74.670 102.900 150.569 1.00 57.29 N
ATOM 18 C4 U A2355 73.341 102.673 150.847 1.00 56.51 C
ATOM 19 O4 U A2355 72.965 101.535 151.121 1.00 55.48 O
ATOM 20 C5 U A2355 72.519 103.830 150.795 1.00 56.73 C
ATOM 21 C6 U A2355 73.057 105.012 150.511 1.00 57.87 C
ATOM 22 P C A2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 23 OP1 C A2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 24 OP2 C A2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 25 O5' C A2356 74.174 106.409 145.317 1.00 61.85 O
TER
ATOM 1 O3' U B2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 2 P C B2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 3 OP1 C B2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 4 OP2 C B2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 5 O5' C B2356 74.174 106.409 145.317 1.00 61.85 O
ATOM 6 C5' C B2356 75.469 106.863 144.871 1.00 61.28 C
ATOM 7 C4' C B2356 76.403 105.700 144.640 1.00 61.04 C
ATOM 8 O4' C B2356 76.628 104.985 145.880 1.00 59.25 O
ATOM 9 C3' C B2356 75.896 104.626 143.704 1.00 61.90 C
ATOM 10 O3' C B2356 76.041 104.984 142.344 1.00 65.03 O
ATOM 11 C2' C B2356 76.765 103.436 144.081 1.00 61.43 C
ATOM 12 O2' C B2356 78.053 103.439 143.490 1.00 61.34 O
ATOM 13 C1' C B2356 76.859 103.614 145.597 1.00 59.29 C
ATOM 14 N1 C B2356 75.837 102.805 146.276 1.00 57.66 N
ATOM 15 C2 C B2356 76.050 101.427 146.386 1.00 57.57 C
ATOM 16 O2 C B2356 77.120 100.952 145.978 1.00 58.35 O
ATOM 17 N3 C B2356 75.088 100.649 146.934 1.00 56.82 N
ATOM 18 C4 C B2356 73.960 101.200 147.381 1.00 57.07 C
ATOM 19 N4 C B2356 73.035 100.386 147.896 1.00 55.99 N
ATOM 20 C5 C B2356 73.731 102.607 147.317 1.00 57.53 C
ATOM 21 C6 C B2356 74.689 103.365 146.763 1.00 57.50 C
ATOM 22 P G B2357 74.929 104.519 141.293 1.00 67.94 P
ATOM 23 OP1 G B2357 75.444 104.898 139.951 1.00 69.64 O
ATOM 24 OP2 G B2357 73.609 105.029 141.743 1.00 67.44 O
ATOM 25 O5' G B2357 74.943 102.930 141.429 1.00 67.17 O
TER
ATOM 2 P U A2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 3 OP1 U A2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 4 OP2 U A2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 5 O5' U A2355 71.290 107.357 149.914 1.00 61.99 O
ATOM 6 C5' U A2355 72.025 108.586 149.737 1.00 60.20 C
ATOM 7 C4' U A2355 73.471 108.279 149.429 1.00 59.47 C
ATOM 8 O4' U A2355 74.048 107.489 150.504 1.00 58.59 O
ATOM 9 C3' U A2355 73.673 107.400 148.214 1.00 59.19 C
ATOM 10 O3' U A2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 11 C2' U A2355 75.041 106.789 148.477 1.00 58.53 C
ATOM 12 O2' U A2355 76.094 107.706 148.263 1.00 57.68 O
ATOM 13 C1' U A2355 74.940 106.519 149.971 1.00 57.88 C
ATOM 14 N1 U A2355 74.394 105.183 150.254 1.00 58.07 N
ATOM 15 C2 U A2355 75.260 104.101 150.259 1.00 58.51 C
ATOM 16 O2 U A2355 76.456 104.193 149.998 1.00 60.19 O
ATOM 17 N3 U A2355 74.670 102.900 150.569 1.00 57.29 N
ATOM 18 C4 U A2355 73.341 102.673 150.847 1.00 56.51 C
ATOM 19 O4 U A2355 72.965 101.535 151.121 1.00 55.48 O
ATOM 20 C5 U A2355 72.519 103.830 150.795 1.00 56.73 C
ATOM 21 C6 U A2355 73.057 105.012 150.511 1.00 57.87 C
ATOM 22 P C A2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 23 OP1 C A2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 24 OP2 C A2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 25 O5' C A2356 74.174 106.409 145.317 1.00 61.85 O
TER
ATOM 1 O3' U B2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 2 P C B2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 3 OP1 C B2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 4 OP2 C B2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 5 O5' C B2356 74.174 106.409 145.317 1.00 61.85 O
ATOM 6 C5' C B2356 75.469 106.863 144.871 1.00 61.28 C
ATOM 7 C4' C B2356 76.403 105.700 144.640 1.00 61.04 C
ATOM 8 O4' C B2356 76.628 104.985 145.880 1.00 59.25 O
ATOM 9 C3' C B2356 75.896 104.626 143.704 1.00 61.90 C
ATOM 10 O3' C B2356 76.041 104.984 142.344 1.00 65.03 O
ATOM 11 C2' C B2356 76.765 103.436 144.081 1.00 61.43 C
ATOM 12 O2' C B2356 78.053 103.439 143.490 1.00 61.34 O
ATOM 13 C1' C B2356 76.859 103.614 145.597 1.00 59.29 C
ATOM 14 N1 C B2356 75.837 102.805 146.276 1.00 57.66 N
ATOM 15 C2 C B2356 76.050 101.427 146.386 1.00 57.57 C
ATOM 16 O2 C B2356 77.120 100.952 145.978 1.00 58.35 O
ATOM 17 N3 C B2356 75.088 100.649 146.934 1.00 56.82 N
ATOM 18 C4 C B2356 73.960 101.200 147.381 1.00 57.07 C
ATOM 19 N4 C B2356 73.035 100.386 147.896 1.00 55.99 N
ATOM 20 C5 C B2356 73.731 102.607 147.317 1.00 57.53 C
ATOM 21 C6 C B2356 74.689 103.365 146.763 1.00 57.50 C
ATOM 22 P G B2357 74.929 104.519 141.293 1.00 67.94 P
ATOM 23 OP1 G B2357 75.444 104.898 139.951 1.00 69.64 O
ATOM 24 OP2 G B2357 73.609 105.029 141.743 1.00 67.44 O
ATOM 25 O5' G B2357 74.943 102.930 141.429 1.00 67.17 O
TER
Atoms:
C4: (73.341,102.673,150.847)
N3: (74.670,102.900,150.569)
OP1: (68.981,108.352,149.656)
OP2: (69.340,105.927,150.413)
C2: (75.260,104.101,150.259)
C1': (74.940,106.519,149.971)
C3': (73.673,107.400,148.214)
O5': (71.290,107.357,149.914)
O4': (74.048,107.489,150.504)
C5': (72.025,108.586,149.737)
P: (69.772,107.345,150.401)
C4': (73.471,108.279,149.429)
C2': (75.041,106.789,148.477)
O2': (76.094,107.706,148.263)
N1: (74.394,105.183,150.254)
O4: (72.965,101.535,151.121)
O2: (76.456,104.193,149.998)
C6: (73.057,105.012,150.511)
C5: (72.519,103.830,150.795)
O3': (73.615,108.150,147.018)
N3: (74.670,102.900,150.569)
OP1: (68.981,108.352,149.656)
OP2: (69.340,105.927,150.413)
C2: (75.260,104.101,150.259)
C1': (74.940,106.519,149.971)
C3': (73.673,107.400,148.214)
O5': (71.290,107.357,149.914)
O4': (74.048,107.489,150.504)
C5': (72.025,108.586,149.737)
P: (69.772,107.345,150.401)
C4': (73.471,108.279,149.429)
C2': (75.041,106.789,148.477)
O2': (76.094,107.706,148.263)
N1: (74.394,105.183,150.254)
O4: (72.965,101.535,151.121)
O2: (76.456,104.193,149.998)
C6: (73.057,105.012,150.511)
C5: (72.519,103.830,150.795)
O3': (73.615,108.150,147.018)
C2: (76.050,101.427,146.386)
OP1: (73.014,108.549,144.676)
OP2: (71.779,106.741,146.031)
C4: (73.960,101.200,147.381)
O5': (74.174,106.409,145.317)
C3': (75.896,104.626,143.704)
C1': (76.859,103.614,145.597)
O4': (76.628,104.985,145.880)
C5': (75.469,106.863,144.871)
P: (73.038,107.466,145.694)
O2: (77.120,100.952,145.978)
C4': (76.403,105.700,144.640)
C2': (76.765,103.436,144.081)
O2': (78.053,103.439,143.490)
N1: (75.837,102.805,146.276)
N3: (75.088,100.649,146.934)
N4: (73.035,100.386,147.896)
C6: (74.689,103.365,146.763)
C5: (73.731,102.607,147.317)
O3': (76.041,104.984,142.344)
OP1: (73.014,108.549,144.676)
OP2: (71.779,106.741,146.031)
C4: (73.960,101.200,147.381)
O5': (74.174,106.409,145.317)
C3': (75.896,104.626,143.704)
C1': (76.859,103.614,145.597)
O4': (76.628,104.985,145.880)
C5': (75.469,106.863,144.871)
P: (73.038,107.466,145.694)
O2: (77.120,100.952,145.978)
C4': (76.403,105.700,144.640)
C2': (76.765,103.436,144.081)
O2': (78.053,103.439,143.490)
N1: (75.837,102.805,146.276)
N3: (75.088,100.649,146.934)
N4: (73.035,100.386,147.896)
C6: (74.689,103.365,146.763)
C5: (73.731,102.607,147.317)
O3': (76.041,104.984,142.344)
Image (generated by PyMOL):