Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:A6:A7
Extra
PDB:
ATOM 1 O3' G A 5 33.245 8.211 54.038 1.00 56.90 O
ATOM 2 P U A 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 3 OP1 U A 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 4 OP2 U A 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 5 O5' U A 6 35.276 7.744 55.472 1.00 59.08 O
ATOM 6 C5' U A 6 35.954 6.905 54.558 1.00 63.50 C
ATOM 7 C4' U A 6 37.436 7.123 54.635 1.00 65.35 C
ATOM 8 O4' U A 6 37.751 8.469 54.174 1.00 63.72 O
ATOM 9 C3' U A 6 38.026 7.081 56.033 1.00 64.38 C
ATOM 10 O3' U A 6 38.197 5.751 56.509 1.00 66.73 O
ATOM 11 C2' U A 6 39.332 7.841 55.820 1.00 65.30 C
ATOM 12 O2' U A 6 40.297 7.085 55.115 1.00 66.98 O
ATOM 13 C1' U A 6 38.880 8.955 54.877 1.00 64.85 C
ATOM 14 N1 U A 6 38.530 10.204 55.570 1.00 65.11 N
ATOM 15 C2 U A 6 39.582 10.979 56.028 1.00 66.69 C
ATOM 16 O2 U A 6 40.747 10.684 55.831 1.00 66.79 O
ATOM 17 N3 U A 6 39.218 12.111 56.712 1.00 67.76 N
ATOM 18 C4 U A 6 37.936 12.546 56.966 1.00 68.63 C
ATOM 19 O4 U A 6 37.774 13.574 57.617 1.00 71.82 O
ATOM 20 C5 U A 6 36.894 11.713 56.436 1.00 68.32 C
ATOM 21 C6 U A 6 37.218 10.594 55.776 1.00 63.98 C
ATOM 22 P C A 7 37.920 5.402 58.050 1.00 73.82 P
ATOM 23 OP1 C A 7 38.300 3.988 58.215 1.00 79.09 O
ATOM 24 OP2 C A 7 36.565 5.853 58.453 1.00 72.90 O
ATOM 25 O5' C A 7 39.010 6.261 58.812 1.00 72.31 O
TER
ATOM 1 O3' U B 6 38.197 5.751 56.509 1.00 66.73 O
ATOM 2 P C B 7 37.920 5.402 58.050 1.00 73.82 P
ATOM 3 OP1 C B 7 38.300 3.988 58.215 1.00 79.09 O
ATOM 4 OP2 C B 7 36.565 5.853 58.453 1.00 72.90 O
ATOM 5 O5' C B 7 39.010 6.261 58.812 1.00 72.31 O
ATOM 6 C5' C B 7 40.394 6.124 58.498 1.00 75.57 C
ATOM 7 C4' C B 7 41.213 7.154 59.245 1.00 79.59 C
ATOM 8 O4' C B 7 40.951 8.474 58.708 1.00 80.29 O
ATOM 9 C3' C B 7 40.890 7.293 60.724 1.00 82.29 C
ATOM 10 O3' C B 7 41.537 6.301 61.501 1.00 84.99 O
ATOM 11 C2' C B 7 41.382 8.701 61.028 1.00 81.53 C
ATOM 12 O2' C B 7 42.778 8.765 61.175 1.00 79.82 O
ATOM 13 C1' C B 7 40.983 9.438 59.752 1.00 78.30 C
ATOM 14 N1 C B 7 39.651 10.069 59.850 1.00 76.60 N
ATOM 15 C2 C B 7 39.544 11.355 60.411 1.00 77.39 C
ATOM 16 O2 C B 7 40.572 11.937 60.801 1.00 78.23 O
ATOM 17 N3 C B 7 38.324 11.927 60.509 1.00 76.10 N
ATOM 18 C4 C B 7 37.236 11.272 60.079 1.00 76.76 C
ATOM 19 N4 C B 7 36.039 11.874 60.202 1.00 75.46 N
ATOM 20 C5 C B 7 37.318 9.973 59.505 1.00 74.15 C
ATOM 21 C6 C B 7 38.532 9.416 59.411 1.00 74.08 C
ATOM 22 P C B 8 40.824 5.733 62.818 1.00 87.19 P
ATOM 23 OP1 C B 8 41.780 4.707 63.300 1.00 92.37 O
ATOM 24 OP2 C B 8 39.403 5.346 62.562 1.00 81.64 O
ATOM 25 O5' C B 8 40.850 6.982 63.809 1.00 86.62 O
TER
ATOM 2 P U A 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 3 OP1 U A 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 4 OP2 U A 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 5 O5' U A 6 35.276 7.744 55.472 1.00 59.08 O
ATOM 6 C5' U A 6 35.954 6.905 54.558 1.00 63.50 C
ATOM 7 C4' U A 6 37.436 7.123 54.635 1.00 65.35 C
ATOM 8 O4' U A 6 37.751 8.469 54.174 1.00 63.72 O
ATOM 9 C3' U A 6 38.026 7.081 56.033 1.00 64.38 C
ATOM 10 O3' U A 6 38.197 5.751 56.509 1.00 66.73 O
ATOM 11 C2' U A 6 39.332 7.841 55.820 1.00 65.30 C
ATOM 12 O2' U A 6 40.297 7.085 55.115 1.00 66.98 O
ATOM 13 C1' U A 6 38.880 8.955 54.877 1.00 64.85 C
ATOM 14 N1 U A 6 38.530 10.204 55.570 1.00 65.11 N
ATOM 15 C2 U A 6 39.582 10.979 56.028 1.00 66.69 C
ATOM 16 O2 U A 6 40.747 10.684 55.831 1.00 66.79 O
ATOM 17 N3 U A 6 39.218 12.111 56.712 1.00 67.76 N
ATOM 18 C4 U A 6 37.936 12.546 56.966 1.00 68.63 C
ATOM 19 O4 U A 6 37.774 13.574 57.617 1.00 71.82 O
ATOM 20 C5 U A 6 36.894 11.713 56.436 1.00 68.32 C
ATOM 21 C6 U A 6 37.218 10.594 55.776 1.00 63.98 C
ATOM 22 P C A 7 37.920 5.402 58.050 1.00 73.82 P
ATOM 23 OP1 C A 7 38.300 3.988 58.215 1.00 79.09 O
ATOM 24 OP2 C A 7 36.565 5.853 58.453 1.00 72.90 O
ATOM 25 O5' C A 7 39.010 6.261 58.812 1.00 72.31 O
TER
ATOM 1 O3' U B 6 38.197 5.751 56.509 1.00 66.73 O
ATOM 2 P C B 7 37.920 5.402 58.050 1.00 73.82 P
ATOM 3 OP1 C B 7 38.300 3.988 58.215 1.00 79.09 O
ATOM 4 OP2 C B 7 36.565 5.853 58.453 1.00 72.90 O
ATOM 5 O5' C B 7 39.010 6.261 58.812 1.00 72.31 O
ATOM 6 C5' C B 7 40.394 6.124 58.498 1.00 75.57 C
ATOM 7 C4' C B 7 41.213 7.154 59.245 1.00 79.59 C
ATOM 8 O4' C B 7 40.951 8.474 58.708 1.00 80.29 O
ATOM 9 C3' C B 7 40.890 7.293 60.724 1.00 82.29 C
ATOM 10 O3' C B 7 41.537 6.301 61.501 1.00 84.99 O
ATOM 11 C2' C B 7 41.382 8.701 61.028 1.00 81.53 C
ATOM 12 O2' C B 7 42.778 8.765 61.175 1.00 79.82 O
ATOM 13 C1' C B 7 40.983 9.438 59.752 1.00 78.30 C
ATOM 14 N1 C B 7 39.651 10.069 59.850 1.00 76.60 N
ATOM 15 C2 C B 7 39.544 11.355 60.411 1.00 77.39 C
ATOM 16 O2 C B 7 40.572 11.937 60.801 1.00 78.23 O
ATOM 17 N3 C B 7 38.324 11.927 60.509 1.00 76.10 N
ATOM 18 C4 C B 7 37.236 11.272 60.079 1.00 76.76 C
ATOM 19 N4 C B 7 36.039 11.874 60.202 1.00 75.46 N
ATOM 20 C5 C B 7 37.318 9.973 59.505 1.00 74.15 C
ATOM 21 C6 C B 7 38.532 9.416 59.411 1.00 74.08 C
ATOM 22 P C B 8 40.824 5.733 62.818 1.00 87.19 P
ATOM 23 OP1 C B 8 41.780 4.707 63.300 1.00 92.37 O
ATOM 24 OP2 C B 8 39.403 5.346 62.562 1.00 81.64 O
ATOM 25 O5' C B 8 40.850 6.982 63.809 1.00 86.62 O
TER
Atoms:
C4: (37.936,12.546,56.966)
N3: (39.218,12.111,56.712)
OP1: (33.241,6.362,55.591)
OP2: (33.262,8.726,56.526)
C2: (39.582,10.979,56.028)
C1': (38.880,8.955,54.877)
C3': (38.026,7.081,56.033)
O5': (35.276,7.744,55.472)
O4': (37.751,8.469,54.174)
C5': (35.954,6.905,54.558)
P: (33.689,7.765,55.509)
C4': (37.436,7.123,54.635)
C2': (39.332,7.841,55.820)
O2': (40.297,7.085,55.115)
N1: (38.530,10.204,55.570)
O4: (37.774,13.574,57.617)
O2: (40.747,10.684,55.831)
C6: (37.218,10.594,55.776)
C5: (36.894,11.713,56.436)
O3': (38.197,5.751,56.509)
N3: (39.218,12.111,56.712)
OP1: (33.241,6.362,55.591)
OP2: (33.262,8.726,56.526)
C2: (39.582,10.979,56.028)
C1': (38.880,8.955,54.877)
C3': (38.026,7.081,56.033)
O5': (35.276,7.744,55.472)
O4': (37.751,8.469,54.174)
C5': (35.954,6.905,54.558)
P: (33.689,7.765,55.509)
C4': (37.436,7.123,54.635)
C2': (39.332,7.841,55.820)
O2': (40.297,7.085,55.115)
N1: (38.530,10.204,55.570)
O4: (37.774,13.574,57.617)
O2: (40.747,10.684,55.831)
C6: (37.218,10.594,55.776)
C5: (36.894,11.713,56.436)
O3': (38.197,5.751,56.509)
C2: (39.544,11.355,60.411)
OP1: (38.300,3.988,58.215)
OP2: (36.565,5.853,58.453)
C4: (37.236,11.272,60.079)
O5': (39.010,6.261,58.812)
C3': (40.890,7.293,60.724)
C1': (40.983,9.438,59.752)
O4': (40.951,8.474,58.708)
C5': (40.394,6.124,58.498)
P: (37.920,5.402,58.050)
O2: (40.572,11.937,60.801)
C4': (41.213,7.154,59.245)
C2': (41.382,8.701,61.028)
O2': (42.778,8.765,61.175)
N1: (39.651,10.069,59.850)
N3: (38.324,11.927,60.509)
N4: (36.039,11.874,60.202)
C6: (38.532,9.416,59.411)
C5: (37.318,9.973,59.505)
O3': (41.537,6.301,61.501)
OP1: (38.300,3.988,58.215)
OP2: (36.565,5.853,58.453)
C4: (37.236,11.272,60.079)
O5': (39.010,6.261,58.812)
C3': (40.890,7.293,60.724)
C1': (40.983,9.438,59.752)
O4': (40.951,8.474,58.708)
C5': (40.394,6.124,58.498)
P: (37.920,5.402,58.050)
O2: (40.572,11.937,60.801)
C4': (41.213,7.154,59.245)
C2': (41.382,8.701,61.028)
O2': (42.778,8.765,61.175)
N1: (39.651,10.069,59.850)
N3: (38.324,11.927,60.509)
N4: (36.039,11.874,60.202)
C6: (38.532,9.416,59.411)
C5: (37.318,9.973,59.505)
O3': (41.537,6.301,61.501)
Image (generated by PyMOL):