Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A57:A58
Extra
PDB:
ATOM 1 O3' G A 56 -0.386 25.044 119.181 1.00 26.52 O
ATOM 2 P U A 57 -0.083 23.706 120.010 1.00 40.24 P
ATOM 3 OP1 U A 57 -1.208 22.769 119.792 1.00 68.54 O
ATOM 4 OP2 U A 57 0.281 24.103 121.394 1.00 67.47 O
ATOM 5 O5' U A 57 1.230 23.139 119.317 1.00 22.34 O
ATOM 6 C5' U A 57 1.285 22.995 117.894 1.00 22.30 C
ATOM 7 C4' U A 57 2.713 22.918 117.433 1.00 22.56 C
ATOM 8 O4' U A 57 3.382 24.176 117.673 1.00 23.32 O
ATOM 9 C3' U A 57 3.557 21.891 118.153 1.00 22.04 C
ATOM 10 O3' U A 57 3.347 20.615 117.570 1.00 24.94 O
ATOM 11 C2' U A 57 4.974 22.433 117.983 1.00 20.22 C
ATOM 12 O2' U A 57 5.556 22.098 116.743 1.00 18.86 O
ATOM 13 C1' U A 57 4.737 23.943 118.021 1.00 19.99 C
ATOM 14 N1 U A 57 4.999 24.585 119.324 1.00 34.02 N
ATOM 15 C2 U A 57 6.281 25.070 119.570 1.00 34.32 C
ATOM 16 O2 U A 57 7.205 24.947 118.786 1.00 33.55 O
ATOM 17 N3 U A 57 6.438 25.703 120.774 1.00 33.63 N
ATOM 18 C4 U A 57 5.482 25.898 121.749 1.00 33.97 C
ATOM 19 O4 U A 57 5.771 26.548 122.769 1.00 37.76 O
ATOM 20 C5 U A 57 4.192 25.345 121.434 1.00 32.40 C
ATOM 21 C6 U A 57 4.000 24.723 120.268 1.00 33.63 C
ATOM 22 P C A 58 3.802 19.300 118.358 1.00 27.37 P
ATOM 23 OP1 C A 58 3.118 18.125 117.764 1.00 58.30 O
ATOM 24 OP2 C A 58 3.680 19.559 119.824 1.00 52.40 O
ATOM 25 O5' C A 58 5.332 19.213 117.979 1.00 31.76 O
TER
ATOM 1 O3' U B 57 3.347 20.615 117.570 1.00 24.94 O
ATOM 2 P C B 58 3.802 19.300 118.358 1.00 27.37 P
ATOM 3 OP1 C B 58 3.118 18.125 117.764 1.00 58.30 O
ATOM 4 OP2 C B 58 3.680 19.559 119.824 1.00 52.40 O
ATOM 5 O5' C B 58 5.332 19.213 117.979 1.00 31.76 O
ATOM 6 C5' C B 58 6.215 18.443 118.763 1.00 33.22 C
ATOM 7 C4' C B 58 7.623 18.720 118.346 1.00 34.26 C
ATOM 8 O4' C B 58 7.815 20.149 118.273 1.00 35.16 O
ATOM 9 C3' C B 58 8.632 18.214 119.349 1.00 35.51 C
ATOM 10 O3' C B 58 8.946 16.873 119.036 1.00 37.56 O
ATOM 11 C2' C B 58 9.789 19.185 119.183 1.00 34.46 C
ATOM 12 O2' C B 58 10.598 18.828 118.079 1.00 36.91 O
ATOM 13 C1' C B 58 9.051 20.490 118.870 1.00 32.49 C
ATOM 14 N1 C B 58 8.760 21.350 120.039 1.00 33.60 N
ATOM 15 C2 C B 58 9.783 22.152 120.576 1.00 33.72 C
ATOM 16 O2 C B 58 10.933 22.067 120.111 1.00 36.00 O
ATOM 17 N3 C B 58 9.491 22.992 121.591 1.00 30.03 N
ATOM 18 C4 C B 58 8.255 23.042 122.079 1.00 31.19 C
ATOM 19 N4 C B 58 8.013 23.906 123.054 1.00 30.93 N
ATOM 20 C5 C B 58 7.209 22.212 121.584 1.00 29.51 C
ATOM 21 C6 C B 58 7.502 21.389 120.578 1.00 32.36 C
ATOM 22 P G B 59 8.353 15.701 119.948 1.00 66.12 P
ATOM 23 OP1 G B 59 8.534 14.464 119.163 1.00 46.96 O
ATOM 24 OP2 G B 59 6.992 16.064 120.437 1.00 42.35 O
ATOM 25 O5' G B 59 9.346 15.680 121.195 1.00 56.68 O
TER
ATOM 2 P U A 57 -0.083 23.706 120.010 1.00 40.24 P
ATOM 3 OP1 U A 57 -1.208 22.769 119.792 1.00 68.54 O
ATOM 4 OP2 U A 57 0.281 24.103 121.394 1.00 67.47 O
ATOM 5 O5' U A 57 1.230 23.139 119.317 1.00 22.34 O
ATOM 6 C5' U A 57 1.285 22.995 117.894 1.00 22.30 C
ATOM 7 C4' U A 57 2.713 22.918 117.433 1.00 22.56 C
ATOM 8 O4' U A 57 3.382 24.176 117.673 1.00 23.32 O
ATOM 9 C3' U A 57 3.557 21.891 118.153 1.00 22.04 C
ATOM 10 O3' U A 57 3.347 20.615 117.570 1.00 24.94 O
ATOM 11 C2' U A 57 4.974 22.433 117.983 1.00 20.22 C
ATOM 12 O2' U A 57 5.556 22.098 116.743 1.00 18.86 O
ATOM 13 C1' U A 57 4.737 23.943 118.021 1.00 19.99 C
ATOM 14 N1 U A 57 4.999 24.585 119.324 1.00 34.02 N
ATOM 15 C2 U A 57 6.281 25.070 119.570 1.00 34.32 C
ATOM 16 O2 U A 57 7.205 24.947 118.786 1.00 33.55 O
ATOM 17 N3 U A 57 6.438 25.703 120.774 1.00 33.63 N
ATOM 18 C4 U A 57 5.482 25.898 121.749 1.00 33.97 C
ATOM 19 O4 U A 57 5.771 26.548 122.769 1.00 37.76 O
ATOM 20 C5 U A 57 4.192 25.345 121.434 1.00 32.40 C
ATOM 21 C6 U A 57 4.000 24.723 120.268 1.00 33.63 C
ATOM 22 P C A 58 3.802 19.300 118.358 1.00 27.37 P
ATOM 23 OP1 C A 58 3.118 18.125 117.764 1.00 58.30 O
ATOM 24 OP2 C A 58 3.680 19.559 119.824 1.00 52.40 O
ATOM 25 O5' C A 58 5.332 19.213 117.979 1.00 31.76 O
TER
ATOM 1 O3' U B 57 3.347 20.615 117.570 1.00 24.94 O
ATOM 2 P C B 58 3.802 19.300 118.358 1.00 27.37 P
ATOM 3 OP1 C B 58 3.118 18.125 117.764 1.00 58.30 O
ATOM 4 OP2 C B 58 3.680 19.559 119.824 1.00 52.40 O
ATOM 5 O5' C B 58 5.332 19.213 117.979 1.00 31.76 O
ATOM 6 C5' C B 58 6.215 18.443 118.763 1.00 33.22 C
ATOM 7 C4' C B 58 7.623 18.720 118.346 1.00 34.26 C
ATOM 8 O4' C B 58 7.815 20.149 118.273 1.00 35.16 O
ATOM 9 C3' C B 58 8.632 18.214 119.349 1.00 35.51 C
ATOM 10 O3' C B 58 8.946 16.873 119.036 1.00 37.56 O
ATOM 11 C2' C B 58 9.789 19.185 119.183 1.00 34.46 C
ATOM 12 O2' C B 58 10.598 18.828 118.079 1.00 36.91 O
ATOM 13 C1' C B 58 9.051 20.490 118.870 1.00 32.49 C
ATOM 14 N1 C B 58 8.760 21.350 120.039 1.00 33.60 N
ATOM 15 C2 C B 58 9.783 22.152 120.576 1.00 33.72 C
ATOM 16 O2 C B 58 10.933 22.067 120.111 1.00 36.00 O
ATOM 17 N3 C B 58 9.491 22.992 121.591 1.00 30.03 N
ATOM 18 C4 C B 58 8.255 23.042 122.079 1.00 31.19 C
ATOM 19 N4 C B 58 8.013 23.906 123.054 1.00 30.93 N
ATOM 20 C5 C B 58 7.209 22.212 121.584 1.00 29.51 C
ATOM 21 C6 C B 58 7.502 21.389 120.578 1.00 32.36 C
ATOM 22 P G B 59 8.353 15.701 119.948 1.00 66.12 P
ATOM 23 OP1 G B 59 8.534 14.464 119.163 1.00 46.96 O
ATOM 24 OP2 G B 59 6.992 16.064 120.437 1.00 42.35 O
ATOM 25 O5' G B 59 9.346 15.680 121.195 1.00 56.68 O
TER
Atoms:
C4: (5.482,25.898,121.749)
N3: (6.438,25.703,120.774)
OP1: (-1.208,22.769,119.792)
OP2: (0.281,24.103,121.394)
C2: (6.281,25.070,119.570)
C1': (4.737,23.943,118.021)
C3': (3.557,21.891,118.153)
O5': (1.230,23.139,119.317)
O4': (3.382,24.176,117.673)
C5': (1.285,22.995,117.894)
P: (-0.083,23.706,120.010)
C4': (2.713,22.918,117.433)
C2': (4.974,22.433,117.983)
O2': (5.556,22.098,116.743)
N1: (4.999,24.585,119.324)
O4: (5.771,26.548,122.769)
O2: (7.205,24.947,118.786)
C6: (4.000,24.723,120.268)
C5: (4.192,25.345,121.434)
O3': (3.347,20.615,117.570)
N3: (6.438,25.703,120.774)
OP1: (-1.208,22.769,119.792)
OP2: (0.281,24.103,121.394)
C2: (6.281,25.070,119.570)
C1': (4.737,23.943,118.021)
C3': (3.557,21.891,118.153)
O5': (1.230,23.139,119.317)
O4': (3.382,24.176,117.673)
C5': (1.285,22.995,117.894)
P: (-0.083,23.706,120.010)
C4': (2.713,22.918,117.433)
C2': (4.974,22.433,117.983)
O2': (5.556,22.098,116.743)
N1: (4.999,24.585,119.324)
O4: (5.771,26.548,122.769)
O2: (7.205,24.947,118.786)
C6: (4.000,24.723,120.268)
C5: (4.192,25.345,121.434)
O3': (3.347,20.615,117.570)
C2: (9.783,22.152,120.576)
OP1: (3.118,18.125,117.764)
OP2: (3.680,19.559,119.824)
C4: (8.255,23.042,122.079)
O5': (5.332,19.213,117.979)
C3': (8.632,18.214,119.349)
C1': (9.051,20.490,118.870)
O4': (7.815,20.149,118.273)
C5': (6.215,18.443,118.763)
P: (3.802,19.300,118.358)
O2: (10.933,22.067,120.111)
C4': (7.623,18.720,118.346)
C2': (9.789,19.185,119.183)
O2': (10.598,18.828,118.079)
N1: (8.760,21.350,120.039)
N3: (9.491,22.992,121.591)
N4: (8.013,23.906,123.054)
C6: (7.502,21.389,120.578)
C5: (7.209,22.212,121.584)
O3': (8.946,16.873,119.036)
OP1: (3.118,18.125,117.764)
OP2: (3.680,19.559,119.824)
C4: (8.255,23.042,122.079)
O5': (5.332,19.213,117.979)
C3': (8.632,18.214,119.349)
C1': (9.051,20.490,118.870)
O4': (7.815,20.149,118.273)
C5': (6.215,18.443,118.763)
P: (3.802,19.300,118.358)
O2: (10.933,22.067,120.111)
C4': (7.623,18.720,118.346)
C2': (9.789,19.185,119.183)
O2': (10.598,18.828,118.079)
N1: (8.760,21.350,120.039)
N3: (9.491,22.992,121.591)
N4: (8.013,23.906,123.054)
C6: (7.502,21.389,120.578)
C5: (7.209,22.212,121.584)
O3': (8.946,16.873,119.036)
Image (generated by PyMOL):