Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A72:A73
Extra
PDB:
ATOM 1 O3' A A 71 -1.930 -15.044 12.521 1.00 63.62 O
ATOM 2 P U A 72 -0.850 -16.228 12.413 1.00 72.56 P
ATOM 3 OP1 U A 72 -1.576 -17.503 12.624 1.00 73.09 O
ATOM 4 OP2 U A 72 0.268 -15.884 13.327 1.00 73.75 O
ATOM 5 O5' U A 72 -0.363 -16.126 10.903 1.00 58.32 O
ATOM 6 C5' U A 72 -1.263 -16.357 9.831 1.00 58.99 C
ATOM 7 C4' U A 72 -0.603 -16.113 8.499 1.00 59.24 C
ATOM 8 O4' U A 72 -0.294 -14.702 8.356 1.00 58.18 O
ATOM 9 C3' U A 72 0.733 -16.806 8.283 1.00 59.48 C
ATOM 10 O3' U A 72 0.597 -18.167 7.907 1.00 61.30 O
ATOM 11 C2' U A 72 1.391 -15.938 7.219 1.00 58.71 C
ATOM 12 O2' U A 72 0.872 -16.240 5.933 1.00 60.03 O
ATOM 13 C1' U A 72 0.903 -14.545 7.621 1.00 57.96 C
ATOM 14 N1 U A 72 1.887 -13.832 8.466 1.00 55.27 N
ATOM 15 C2 U A 72 2.856 -13.093 7.814 1.00 55.15 C
ATOM 16 O2 U A 72 2.920 -13.024 6.599 1.00 58.21 O
ATOM 17 N3 U A 72 3.750 -12.448 8.632 1.00 51.64 N
ATOM 18 C4 U A 72 3.767 -12.462 10.012 1.00 50.19 C
ATOM 19 O4 U A 72 4.637 -11.828 10.613 1.00 45.55 O
ATOM 20 C5 U A 72 2.730 -13.247 10.613 1.00 52.84 C
ATOM 21 C6 U A 72 1.845 -13.889 9.840 1.00 54.22 C
ATOM 22 P C A 73 1.763 -19.221 8.245 1.00 78.86 P
ATOM 23 OP1 C A 73 1.236 -20.572 7.932 1.00 80.23 O
ATOM 24 OP2 C A 73 2.221 -18.939 9.628 1.00 78.06 O
ATOM 25 O5' C A 73 2.903 -18.831 7.205 1.00 54.27 O
TER
ATOM 1 O3' U B 72 0.597 -18.167 7.907 1.00 61.30 O
ATOM 2 P C B 73 1.763 -19.221 8.245 1.00 78.86 P
ATOM 3 OP1 C B 73 1.236 -20.572 7.932 1.00 80.23 O
ATOM 4 OP2 C B 73 2.221 -18.939 9.628 1.00 78.06 O
ATOM 5 O5' C B 73 2.903 -18.831 7.205 1.00 54.27 O
ATOM 6 C5' C B 73 2.677 -18.923 5.806 1.00 55.40 C
ATOM 7 C4' C B 73 3.804 -18.301 5.021 1.00 56.68 C
ATOM 8 O4' C B 73 3.841 -16.871 5.266 1.00 56.37 O
ATOM 9 C3' C B 73 5.206 -18.772 5.379 1.00 58.42 C
ATOM 10 O3' C B 73 5.549 -20.010 4.779 1.00 59.57 O
ATOM 11 C2' C B 73 6.073 -17.606 4.922 1.00 57.79 C
ATOM 12 O2' C B 73 6.251 -17.632 3.513 1.00 57.77 O
ATOM 13 C1' C B 73 5.179 -16.417 5.271 1.00 57.16 C
ATOM 14 N1 C B 73 5.484 -15.871 6.608 1.00 57.28 N
ATOM 15 C2 C B 73 6.500 -14.919 6.723 1.00 59.27 C
ATOM 16 O2 C B 73 7.113 -14.570 5.700 1.00 59.67 O
ATOM 17 N3 C B 73 6.787 -14.406 7.942 1.00 59.32 N
ATOM 18 C4 C B 73 6.103 -14.809 9.015 1.00 57.43 C
ATOM 19 N4 C B 73 6.422 -14.275 10.197 1.00 55.22 N
ATOM 20 C5 C B 73 5.061 -15.778 8.924 1.00 57.68 C
ATOM 21 C6 C B 73 4.787 -16.277 7.711 1.00 57.10 C
ATOM 22 P A B 74 6.680 -20.942 5.438 1.00 62.50 P
ATOM 23 OP1 A B 74 6.718 -22.202 4.656 1.00 63.54 O
ATOM 24 OP2 A B 74 6.395 -21.015 6.893 1.00 62.52 O
ATOM 25 O5' A B 74 8.014 -20.110 5.188 1.00 51.86 O
TER
ATOM 2 P U A 72 -0.850 -16.228 12.413 1.00 72.56 P
ATOM 3 OP1 U A 72 -1.576 -17.503 12.624 1.00 73.09 O
ATOM 4 OP2 U A 72 0.268 -15.884 13.327 1.00 73.75 O
ATOM 5 O5' U A 72 -0.363 -16.126 10.903 1.00 58.32 O
ATOM 6 C5' U A 72 -1.263 -16.357 9.831 1.00 58.99 C
ATOM 7 C4' U A 72 -0.603 -16.113 8.499 1.00 59.24 C
ATOM 8 O4' U A 72 -0.294 -14.702 8.356 1.00 58.18 O
ATOM 9 C3' U A 72 0.733 -16.806 8.283 1.00 59.48 C
ATOM 10 O3' U A 72 0.597 -18.167 7.907 1.00 61.30 O
ATOM 11 C2' U A 72 1.391 -15.938 7.219 1.00 58.71 C
ATOM 12 O2' U A 72 0.872 -16.240 5.933 1.00 60.03 O
ATOM 13 C1' U A 72 0.903 -14.545 7.621 1.00 57.96 C
ATOM 14 N1 U A 72 1.887 -13.832 8.466 1.00 55.27 N
ATOM 15 C2 U A 72 2.856 -13.093 7.814 1.00 55.15 C
ATOM 16 O2 U A 72 2.920 -13.024 6.599 1.00 58.21 O
ATOM 17 N3 U A 72 3.750 -12.448 8.632 1.00 51.64 N
ATOM 18 C4 U A 72 3.767 -12.462 10.012 1.00 50.19 C
ATOM 19 O4 U A 72 4.637 -11.828 10.613 1.00 45.55 O
ATOM 20 C5 U A 72 2.730 -13.247 10.613 1.00 52.84 C
ATOM 21 C6 U A 72 1.845 -13.889 9.840 1.00 54.22 C
ATOM 22 P C A 73 1.763 -19.221 8.245 1.00 78.86 P
ATOM 23 OP1 C A 73 1.236 -20.572 7.932 1.00 80.23 O
ATOM 24 OP2 C A 73 2.221 -18.939 9.628 1.00 78.06 O
ATOM 25 O5' C A 73 2.903 -18.831 7.205 1.00 54.27 O
TER
ATOM 1 O3' U B 72 0.597 -18.167 7.907 1.00 61.30 O
ATOM 2 P C B 73 1.763 -19.221 8.245 1.00 78.86 P
ATOM 3 OP1 C B 73 1.236 -20.572 7.932 1.00 80.23 O
ATOM 4 OP2 C B 73 2.221 -18.939 9.628 1.00 78.06 O
ATOM 5 O5' C B 73 2.903 -18.831 7.205 1.00 54.27 O
ATOM 6 C5' C B 73 2.677 -18.923 5.806 1.00 55.40 C
ATOM 7 C4' C B 73 3.804 -18.301 5.021 1.00 56.68 C
ATOM 8 O4' C B 73 3.841 -16.871 5.266 1.00 56.37 O
ATOM 9 C3' C B 73 5.206 -18.772 5.379 1.00 58.42 C
ATOM 10 O3' C B 73 5.549 -20.010 4.779 1.00 59.57 O
ATOM 11 C2' C B 73 6.073 -17.606 4.922 1.00 57.79 C
ATOM 12 O2' C B 73 6.251 -17.632 3.513 1.00 57.77 O
ATOM 13 C1' C B 73 5.179 -16.417 5.271 1.00 57.16 C
ATOM 14 N1 C B 73 5.484 -15.871 6.608 1.00 57.28 N
ATOM 15 C2 C B 73 6.500 -14.919 6.723 1.00 59.27 C
ATOM 16 O2 C B 73 7.113 -14.570 5.700 1.00 59.67 O
ATOM 17 N3 C B 73 6.787 -14.406 7.942 1.00 59.32 N
ATOM 18 C4 C B 73 6.103 -14.809 9.015 1.00 57.43 C
ATOM 19 N4 C B 73 6.422 -14.275 10.197 1.00 55.22 N
ATOM 20 C5 C B 73 5.061 -15.778 8.924 1.00 57.68 C
ATOM 21 C6 C B 73 4.787 -16.277 7.711 1.00 57.10 C
ATOM 22 P A B 74 6.680 -20.942 5.438 1.00 62.50 P
ATOM 23 OP1 A B 74 6.718 -22.202 4.656 1.00 63.54 O
ATOM 24 OP2 A B 74 6.395 -21.015 6.893 1.00 62.52 O
ATOM 25 O5' A B 74 8.014 -20.110 5.188 1.00 51.86 O
TER
Atoms:
C4: (3.767,-12.462,10.012)
N3: (3.750,-12.448,8.632)
OP1: (-1.576,-17.503,12.624)
OP2: (0.268,-15.884,13.327)
C2: (2.856,-13.093,7.814)
C1': (0.903,-14.545,7.621)
C3': (0.733,-16.806,8.283)
O5': (-0.363,-16.126,10.903)
O4': (-0.294,-14.702,8.356)
C5': (-1.263,-16.357,9.831)
P: (-0.850,-16.228,12.413)
C4': (-0.603,-16.113,8.499)
C2': (1.391,-15.938,7.219)
O2': (0.872,-16.240,5.933)
N1: (1.887,-13.832,8.466)
O4: (4.637,-11.828,10.613)
O2: (2.920,-13.024,6.599)
C6: (1.845,-13.889,9.840)
C5: (2.730,-13.247,10.613)
O3': (0.597,-18.167,7.907)
N3: (3.750,-12.448,8.632)
OP1: (-1.576,-17.503,12.624)
OP2: (0.268,-15.884,13.327)
C2: (2.856,-13.093,7.814)
C1': (0.903,-14.545,7.621)
C3': (0.733,-16.806,8.283)
O5': (-0.363,-16.126,10.903)
O4': (-0.294,-14.702,8.356)
C5': (-1.263,-16.357,9.831)
P: (-0.850,-16.228,12.413)
C4': (-0.603,-16.113,8.499)
C2': (1.391,-15.938,7.219)
O2': (0.872,-16.240,5.933)
N1: (1.887,-13.832,8.466)
O4: (4.637,-11.828,10.613)
O2: (2.920,-13.024,6.599)
C6: (1.845,-13.889,9.840)
C5: (2.730,-13.247,10.613)
O3': (0.597,-18.167,7.907)
C2: (6.500,-14.919,6.723)
OP1: (1.236,-20.572,7.932)
OP2: (2.221,-18.939,9.628)
C4: (6.103,-14.809,9.015)
O5': (2.903,-18.831,7.205)
C3': (5.206,-18.772,5.379)
C1': (5.179,-16.417,5.271)
O4': (3.841,-16.871,5.266)
C5': (2.677,-18.923,5.806)
P: (1.763,-19.221,8.245)
O2: (7.113,-14.570,5.700)
C4': (3.804,-18.301,5.021)
C2': (6.073,-17.606,4.922)
O2': (6.251,-17.632,3.513)
N1: (5.484,-15.871,6.608)
N3: (6.787,-14.406,7.942)
N4: (6.422,-14.275,10.197)
C6: (4.787,-16.277,7.711)
C5: (5.061,-15.778,8.924)
O3': (5.549,-20.010,4.779)
OP1: (1.236,-20.572,7.932)
OP2: (2.221,-18.939,9.628)
C4: (6.103,-14.809,9.015)
O5': (2.903,-18.831,7.205)
C3': (5.206,-18.772,5.379)
C1': (5.179,-16.417,5.271)
O4': (3.841,-16.871,5.266)
C5': (2.677,-18.923,5.806)
P: (1.763,-19.221,8.245)
O2: (7.113,-14.570,5.700)
C4': (3.804,-18.301,5.021)
C2': (6.073,-17.606,4.922)
O2': (6.251,-17.632,3.513)
N1: (5.484,-15.871,6.608)
N3: (6.787,-14.406,7.942)
N4: (6.422,-14.275,10.197)
C6: (4.787,-16.277,7.711)
C5: (5.061,-15.778,8.924)
O3': (5.549,-20.010,4.779)
Image (generated by PyMOL):