Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0431:0429
Extra
PDB:
ATOM 1 O3' A A 430 54.091 133.974 36.319 1.00 47.39 O
ATOM 2 P C A 431 52.531 134.356 36.385 1.00 50.34 P
ATOM 3 OP1 C A 431 52.426 135.751 36.872 1.00 50.59 O
ATOM 4 OP2 C A 431 51.797 133.280 37.096 1.00 51.18 O
ATOM 5 O5' C A 431 52.086 134.318 34.857 1.00 50.85 O
ATOM 6 C5' C A 431 52.606 135.268 33.915 1.00 48.27 C
ATOM 7 C4' C A 431 52.128 134.941 32.524 1.00 48.12 C
ATOM 8 O4' C A 431 52.778 133.738 32.041 1.00 48.14 O
ATOM 9 C3' C A 431 50.649 134.631 32.388 1.00 47.78 C
ATOM 10 O3' C A 431 49.864 135.813 32.381 1.00 47.64 O
ATOM 11 C2' C A 431 50.611 133.866 31.073 1.00 48.81 C
ATOM 12 O2' C A 431 50.702 134.703 29.935 1.00 49.63 O
ATOM 13 C1' C A 431 51.895 133.037 31.180 1.00 49.06 C
ATOM 14 N1 C A 431 51.667 131.685 31.728 1.00 50.96 N
ATOM 15 C2 C A 431 51.271 130.663 30.853 1.00 51.75 C
ATOM 16 O2 C A 431 51.133 130.922 29.647 1.00 52.81 O
ATOM 17 N3 C A 431 51.050 129.421 31.342 1.00 51.88 N
ATOM 18 C4 C A 431 51.207 129.178 32.644 1.00 51.05 C
ATOM 19 N4 C A 431 50.971 127.936 33.079 1.00 49.26 N
ATOM 20 C5 C A 431 51.612 130.196 33.557 1.00 51.20 C
ATOM 21 C6 C A 431 51.831 131.422 33.062 1.00 50.45 C
ATOM 22 P C A 432 48.353 135.764 32.918 1.00 47.61 P
ATOM 23 OP1 C A 432 47.836 137.156 32.958 1.00 49.05 O
ATOM 24 OP2 C A 432 48.327 134.943 34.151 1.00 47.93 O
ATOM 25 O5' C A 432 47.578 135.001 31.755 1.00 47.17 O
TER
ATOM 1 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 2 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 3 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 4 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 5 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
ATOM 6 C5' A B 429 55.529 124.900 38.130 1.00 46.74 C
ATOM 7 C4' A B 429 55.204 126.045 37.207 1.00 47.98 C
ATOM 8 O4' A B 429 55.179 125.547 35.841 1.00 48.68 O
ATOM 9 C3' A B 429 53.851 126.707 37.437 1.00 49.08 C
ATOM 10 O3' A B 429 53.934 128.084 37.105 1.00 49.93 O
ATOM 11 C2' A B 429 52.938 125.961 36.470 1.00 48.35 C
ATOM 12 O2' A B 429 51.834 126.723 36.034 1.00 47.18 O
ATOM 13 C1' A B 429 53.876 125.673 35.302 1.00 48.75 C
ATOM 14 N9 A B 429 53.529 124.405 34.667 1.00 51.72 N
ATOM 15 C8 A B 429 53.477 123.158 35.252 1.00 52.17 C
ATOM 16 N7 A B 429 53.079 122.210 34.441 1.00 53.08 N
ATOM 17 C5 A B 429 52.864 122.871 33.238 1.00 53.69 C
ATOM 18 C6 A B 429 52.419 122.427 31.986 1.00 53.24 C
ATOM 19 N6 A B 429 52.079 121.164 31.731 1.00 52.59 N
ATOM 20 N1 A B 429 52.327 123.337 30.993 1.00 53.84 N
ATOM 21 C2 A B 429 52.659 124.607 31.253 1.00 53.66 C
ATOM 22 N3 A B 429 53.079 125.150 32.391 1.00 53.38 N
ATOM 23 C4 A B 429 53.158 124.219 33.358 1.00 53.25 C
ATOM 24 P A B 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 25 OP1 A B 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 26 OP2 A B 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 27 O5' A B 430 53.688 130.557 37.413 1.00 48.06 O
TER
ATOM 2 P C A 431 52.531 134.356 36.385 1.00 50.34 P
ATOM 3 OP1 C A 431 52.426 135.751 36.872 1.00 50.59 O
ATOM 4 OP2 C A 431 51.797 133.280 37.096 1.00 51.18 O
ATOM 5 O5' C A 431 52.086 134.318 34.857 1.00 50.85 O
ATOM 6 C5' C A 431 52.606 135.268 33.915 1.00 48.27 C
ATOM 7 C4' C A 431 52.128 134.941 32.524 1.00 48.12 C
ATOM 8 O4' C A 431 52.778 133.738 32.041 1.00 48.14 O
ATOM 9 C3' C A 431 50.649 134.631 32.388 1.00 47.78 C
ATOM 10 O3' C A 431 49.864 135.813 32.381 1.00 47.64 O
ATOM 11 C2' C A 431 50.611 133.866 31.073 1.00 48.81 C
ATOM 12 O2' C A 431 50.702 134.703 29.935 1.00 49.63 O
ATOM 13 C1' C A 431 51.895 133.037 31.180 1.00 49.06 C
ATOM 14 N1 C A 431 51.667 131.685 31.728 1.00 50.96 N
ATOM 15 C2 C A 431 51.271 130.663 30.853 1.00 51.75 C
ATOM 16 O2 C A 431 51.133 130.922 29.647 1.00 52.81 O
ATOM 17 N3 C A 431 51.050 129.421 31.342 1.00 51.88 N
ATOM 18 C4 C A 431 51.207 129.178 32.644 1.00 51.05 C
ATOM 19 N4 C A 431 50.971 127.936 33.079 1.00 49.26 N
ATOM 20 C5 C A 431 51.612 130.196 33.557 1.00 51.20 C
ATOM 21 C6 C A 431 51.831 131.422 33.062 1.00 50.45 C
ATOM 22 P C A 432 48.353 135.764 32.918 1.00 47.61 P
ATOM 23 OP1 C A 432 47.836 137.156 32.958 1.00 49.05 O
ATOM 24 OP2 C A 432 48.327 134.943 34.151 1.00 47.93 O
ATOM 25 O5' C A 432 47.578 135.001 31.755 1.00 47.17 O
TER
ATOM 1 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 2 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 3 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 4 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 5 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
ATOM 6 C5' A B 429 55.529 124.900 38.130 1.00 46.74 C
ATOM 7 C4' A B 429 55.204 126.045 37.207 1.00 47.98 C
ATOM 8 O4' A B 429 55.179 125.547 35.841 1.00 48.68 O
ATOM 9 C3' A B 429 53.851 126.707 37.437 1.00 49.08 C
ATOM 10 O3' A B 429 53.934 128.084 37.105 1.00 49.93 O
ATOM 11 C2' A B 429 52.938 125.961 36.470 1.00 48.35 C
ATOM 12 O2' A B 429 51.834 126.723 36.034 1.00 47.18 O
ATOM 13 C1' A B 429 53.876 125.673 35.302 1.00 48.75 C
ATOM 14 N9 A B 429 53.529 124.405 34.667 1.00 51.72 N
ATOM 15 C8 A B 429 53.477 123.158 35.252 1.00 52.17 C
ATOM 16 N7 A B 429 53.079 122.210 34.441 1.00 53.08 N
ATOM 17 C5 A B 429 52.864 122.871 33.238 1.00 53.69 C
ATOM 18 C6 A B 429 52.419 122.427 31.986 1.00 53.24 C
ATOM 19 N6 A B 429 52.079 121.164 31.731 1.00 52.59 N
ATOM 20 N1 A B 429 52.327 123.337 30.993 1.00 53.84 N
ATOM 21 C2 A B 429 52.659 124.607 31.253 1.00 53.66 C
ATOM 22 N3 A B 429 53.079 125.150 32.391 1.00 53.38 N
ATOM 23 C4 A B 429 53.158 124.219 33.358 1.00 53.25 C
ATOM 24 P A B 430 53.262 129.170 38.071 1.00 49.70 P
ATOM 25 OP1 A B 430 53.922 129.040 39.398 1.00 51.01 O
ATOM 26 OP2 A B 430 51.791 129.023 37.973 1.00 50.09 O
ATOM 27 O5' A B 430 53.688 130.557 37.413 1.00 48.06 O
TER
Atoms:
C2: (51.271,130.663,30.853)
OP1: (52.426,135.751,36.872)
OP2: (51.797,133.280,37.096)
C4: (51.207,129.178,32.644)
O5': (52.086,134.318,34.857)
C3': (50.649,134.631,32.388)
C1': (51.895,133.037,31.180)
O4': (52.778,133.738,32.041)
C5': (52.606,135.268,33.915)
P: (52.531,134.356,36.385)
O2: (51.133,130.922,29.647)
C4': (52.128,134.941,32.524)
C2': (50.611,133.866,31.073)
O2': (50.702,134.703,29.935)
N1: (51.667,131.685,31.728)
N3: (51.050,129.421,31.342)
N4: (50.971,127.936,33.079)
C6: (51.831,131.422,33.062)
C5: (51.612,130.196,33.557)
O3': (49.864,135.813,32.381)
OP1: (52.426,135.751,36.872)
OP2: (51.797,133.280,37.096)
C4: (51.207,129.178,32.644)
O5': (52.086,134.318,34.857)
C3': (50.649,134.631,32.388)
C1': (51.895,133.037,31.180)
O4': (52.778,133.738,32.041)
C5': (52.606,135.268,33.915)
P: (52.531,134.356,36.385)
O2: (51.133,130.922,29.647)
C4': (52.128,134.941,32.524)
C2': (50.611,133.866,31.073)
O2': (50.702,134.703,29.935)
N1: (51.667,131.685,31.728)
N3: (51.050,129.421,31.342)
N4: (50.971,127.936,33.079)
C6: (51.831,131.422,33.062)
C5: (51.612,130.196,33.557)
O3': (49.864,135.813,32.381)
OP1: (55.011,122.677,40.102)
OP2: (53.709,121.503,38.217)
C3': (53.851,126.707,37.437)
C1': (53.876,125.673,35.302)
C5': (55.529,124.900,38.130)
O4': (55.179,125.547,35.841)
C8: (53.477,123.158,35.252)
O2': (51.834,126.723,36.034)
C6: (52.419,122.427,31.986)
C5: (52.864,122.871,33.238)
C4: (53.158,124.219,33.358)
P: (54.788,122.430,38.651)
C4': (55.204,126.045,37.207)
C2': (52.938,125.961,36.470)
C2: (52.659,124.607,31.253)
N1: (52.327,123.337,30.993)
N3: (53.079,125.150,32.391)
N6: (52.079,121.164,31.731)
N7: (53.079,122.210,34.441)
N9: (53.529,124.405,34.667)
O5': (54.561,123.850,37.973)
O3': (53.934,128.084,37.105)
OP2: (53.709,121.503,38.217)
C3': (53.851,126.707,37.437)
C1': (53.876,125.673,35.302)
C5': (55.529,124.900,38.130)
O4': (55.179,125.547,35.841)
C8: (53.477,123.158,35.252)
O2': (51.834,126.723,36.034)
C6: (52.419,122.427,31.986)
C5: (52.864,122.871,33.238)
C4: (53.158,124.219,33.358)
P: (54.788,122.430,38.651)
C4': (55.204,126.045,37.207)
C2': (52.938,125.961,36.470)
C2: (52.659,124.607,31.253)
N1: (52.327,123.337,30.993)
N3: (53.079,125.150,32.391)
N6: (52.079,121.164,31.731)
N7: (53.079,122.210,34.441)
N9: (53.529,124.405,34.667)
O5': (54.561,123.850,37.973)
O3': (53.934,128.084,37.105)
Image (generated by PyMOL):