Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12883:12884
Extra
PDB:
ATOM 1 O3' A A2882 20.501 33.734 25.225 1.00 50.84 O
ATOM 2 P U A2883 21.889 33.217 25.844 1.00 50.13 P
ATOM 3 OP1 U A2883 21.729 33.131 27.287 1.00 49.78 O
ATOM 4 OP2 U A2883 22.928 34.101 25.316 1.00 50.35 O
ATOM 5 O5' U A2883 22.034 31.767 25.230 1.00 49.90 O
ATOM 6 C5' U A2883 22.408 30.667 26.034 1.00 49.38 C
ATOM 7 C4' U A2883 23.223 29.675 25.247 1.00 49.23 C
ATOM 8 O4' U A2883 22.654 29.525 23.932 1.00 49.62 O
ATOM 9 C3' U A2883 24.662 30.074 25.019 1.00 49.20 C
ATOM 10 O3' U A2883 25.493 29.603 26.040 1.00 48.73 O
ATOM 11 C2' U A2883 25.013 29.497 23.663 1.00 49.37 C
ATOM 12 O2' U A2883 25.521 28.171 23.801 1.00 48.97 O
ATOM 13 C1' U A2883 23.651 29.452 22.965 1.00 49.73 C
ATOM 14 N1 U A2883 23.433 30.554 22.023 1.00 50.27 N
ATOM 15 C2 U A2883 24.195 30.701 20.903 1.00 50.52 C
ATOM 16 O2 U A2883 25.153 29.990 20.661 1.00 50.29 O
ATOM 17 N3 U A2883 23.845 31.728 20.081 1.00 51.04 N
ATOM 18 C4 U A2883 22.790 32.590 20.241 1.00 51.36 C
ATOM 19 O4 U A2883 22.551 33.457 19.379 1.00 51.86 O
ATOM 20 C5 U A2883 22.025 32.348 21.425 1.00 51.07 C
ATOM 21 C6 U A2883 22.361 31.353 22.236 1.00 50.55 C
ATOM 22 P C A2884 26.500 30.605 26.757 1.00 52.30 P
ATOM 23 OP1 C A2884 26.990 29.906 27.997 1.00 51.78 O
ATOM 24 OP2 C A2884 25.785 31.895 26.900 1.00 52.66 O
ATOM 25 O5' C A2884 27.676 30.740 25.677 1.00 52.46 O
TER
ATOM 1 O3' U B2883 25.493 29.603 26.040 1.00 48.73 O
ATOM 2 P C B2884 26.500 30.605 26.757 1.00 52.30 P
ATOM 3 OP1 C B2884 26.990 29.906 27.997 1.00 51.78 O
ATOM 4 OP2 C B2884 25.785 31.895 26.900 1.00 52.66 O
ATOM 5 O5' C B2884 27.676 30.740 25.677 1.00 52.46 O
ATOM 6 C5' C B2884 28.336 29.586 25.186 1.00 52.24 C
ATOM 7 C4' C B2884 29.083 29.876 23.924 1.00 52.55 C
ATOM 8 O4' C B2884 28.144 30.194 22.889 1.00 53.00 O
ATOM 9 C3' C B2884 30.013 31.075 23.968 1.00 52.72 C
ATOM 10 O3' C B2884 31.276 30.753 24.491 1.00 52.39 O
ATOM 11 C2' C B2884 30.082 31.517 22.527 1.00 53.20 C
ATOM 12 O2' C B2884 31.041 30.748 21.831 1.00 53.11 O
ATOM 13 C1' C B2884 28.694 31.144 22.014 1.00 53.40 C
ATOM 14 N1 C B2884 27.781 32.282 21.936 1.00 53.80 N
ATOM 15 C2 C B2884 27.927 33.200 20.939 1.00 54.29 C
ATOM 16 O2 C B2884 28.864 33.064 20.204 1.00 54.35 O
ATOM 17 N3 C B2884 27.095 34.231 20.792 1.00 54.69 N
ATOM 18 C4 C B2884 26.091 34.349 21.631 1.00 54.61 C
ATOM 19 N4 C B2884 25.283 35.371 21.439 1.00 55.03 N
ATOM 20 C5 C B2884 25.865 33.425 22.684 1.00 54.11 C
ATOM 21 C6 C B2884 26.734 32.402 22.787 1.00 53.72 C
ATOM 22 P C B2885 32.094 31.825 25.358 1.00 53.04 P
ATOM 23 OP1 C B2885 33.248 31.103 25.970 1.00 52.61 O
ATOM 24 OP2 C B2885 31.137 32.495 26.240 1.00 53.08 O
ATOM 25 O5' C B2885 32.620 32.819 24.269 1.00 53.51 O
TER
ATOM 2 P U A2883 21.889 33.217 25.844 1.00 50.13 P
ATOM 3 OP1 U A2883 21.729 33.131 27.287 1.00 49.78 O
ATOM 4 OP2 U A2883 22.928 34.101 25.316 1.00 50.35 O
ATOM 5 O5' U A2883 22.034 31.767 25.230 1.00 49.90 O
ATOM 6 C5' U A2883 22.408 30.667 26.034 1.00 49.38 C
ATOM 7 C4' U A2883 23.223 29.675 25.247 1.00 49.23 C
ATOM 8 O4' U A2883 22.654 29.525 23.932 1.00 49.62 O
ATOM 9 C3' U A2883 24.662 30.074 25.019 1.00 49.20 C
ATOM 10 O3' U A2883 25.493 29.603 26.040 1.00 48.73 O
ATOM 11 C2' U A2883 25.013 29.497 23.663 1.00 49.37 C
ATOM 12 O2' U A2883 25.521 28.171 23.801 1.00 48.97 O
ATOM 13 C1' U A2883 23.651 29.452 22.965 1.00 49.73 C
ATOM 14 N1 U A2883 23.433 30.554 22.023 1.00 50.27 N
ATOM 15 C2 U A2883 24.195 30.701 20.903 1.00 50.52 C
ATOM 16 O2 U A2883 25.153 29.990 20.661 1.00 50.29 O
ATOM 17 N3 U A2883 23.845 31.728 20.081 1.00 51.04 N
ATOM 18 C4 U A2883 22.790 32.590 20.241 1.00 51.36 C
ATOM 19 O4 U A2883 22.551 33.457 19.379 1.00 51.86 O
ATOM 20 C5 U A2883 22.025 32.348 21.425 1.00 51.07 C
ATOM 21 C6 U A2883 22.361 31.353 22.236 1.00 50.55 C
ATOM 22 P C A2884 26.500 30.605 26.757 1.00 52.30 P
ATOM 23 OP1 C A2884 26.990 29.906 27.997 1.00 51.78 O
ATOM 24 OP2 C A2884 25.785 31.895 26.900 1.00 52.66 O
ATOM 25 O5' C A2884 27.676 30.740 25.677 1.00 52.46 O
TER
ATOM 1 O3' U B2883 25.493 29.603 26.040 1.00 48.73 O
ATOM 2 P C B2884 26.500 30.605 26.757 1.00 52.30 P
ATOM 3 OP1 C B2884 26.990 29.906 27.997 1.00 51.78 O
ATOM 4 OP2 C B2884 25.785 31.895 26.900 1.00 52.66 O
ATOM 5 O5' C B2884 27.676 30.740 25.677 1.00 52.46 O
ATOM 6 C5' C B2884 28.336 29.586 25.186 1.00 52.24 C
ATOM 7 C4' C B2884 29.083 29.876 23.924 1.00 52.55 C
ATOM 8 O4' C B2884 28.144 30.194 22.889 1.00 53.00 O
ATOM 9 C3' C B2884 30.013 31.075 23.968 1.00 52.72 C
ATOM 10 O3' C B2884 31.276 30.753 24.491 1.00 52.39 O
ATOM 11 C2' C B2884 30.082 31.517 22.527 1.00 53.20 C
ATOM 12 O2' C B2884 31.041 30.748 21.831 1.00 53.11 O
ATOM 13 C1' C B2884 28.694 31.144 22.014 1.00 53.40 C
ATOM 14 N1 C B2884 27.781 32.282 21.936 1.00 53.80 N
ATOM 15 C2 C B2884 27.927 33.200 20.939 1.00 54.29 C
ATOM 16 O2 C B2884 28.864 33.064 20.204 1.00 54.35 O
ATOM 17 N3 C B2884 27.095 34.231 20.792 1.00 54.69 N
ATOM 18 C4 C B2884 26.091 34.349 21.631 1.00 54.61 C
ATOM 19 N4 C B2884 25.283 35.371 21.439 1.00 55.03 N
ATOM 20 C5 C B2884 25.865 33.425 22.684 1.00 54.11 C
ATOM 21 C6 C B2884 26.734 32.402 22.787 1.00 53.72 C
ATOM 22 P C B2885 32.094 31.825 25.358 1.00 53.04 P
ATOM 23 OP1 C B2885 33.248 31.103 25.970 1.00 52.61 O
ATOM 24 OP2 C B2885 31.137 32.495 26.240 1.00 53.08 O
ATOM 25 O5' C B2885 32.620 32.819 24.269 1.00 53.51 O
TER
Atoms:
C4: (22.790,32.590,20.241)
N3: (23.845,31.728,20.081)
OP1: (21.729,33.131,27.287)
OP2: (22.928,34.101,25.316)
C2: (24.195,30.701,20.903)
C1': (23.651,29.452,22.965)
C3': (24.662,30.074,25.019)
O5': (22.034,31.767,25.230)
O4': (22.654,29.525,23.932)
C5': (22.408,30.667,26.034)
P: (21.889,33.217,25.844)
C4': (23.223,29.675,25.247)
C2': (25.013,29.497,23.663)
O2': (25.521,28.171,23.801)
N1: (23.433,30.554,22.023)
O4: (22.551,33.457,19.379)
O2: (25.153,29.990,20.661)
C6: (22.361,31.353,22.236)
C5: (22.025,32.348,21.425)
O3': (25.493,29.603,26.040)
N3: (23.845,31.728,20.081)
OP1: (21.729,33.131,27.287)
OP2: (22.928,34.101,25.316)
C2: (24.195,30.701,20.903)
C1': (23.651,29.452,22.965)
C3': (24.662,30.074,25.019)
O5': (22.034,31.767,25.230)
O4': (22.654,29.525,23.932)
C5': (22.408,30.667,26.034)
P: (21.889,33.217,25.844)
C4': (23.223,29.675,25.247)
C2': (25.013,29.497,23.663)
O2': (25.521,28.171,23.801)
N1: (23.433,30.554,22.023)
O4: (22.551,33.457,19.379)
O2: (25.153,29.990,20.661)
C6: (22.361,31.353,22.236)
C5: (22.025,32.348,21.425)
O3': (25.493,29.603,26.040)
C2: (27.927,33.200,20.939)
OP1: (26.990,29.906,27.997)
OP2: (25.785,31.895,26.900)
C4: (26.091,34.349,21.631)
O5': (27.676,30.740,25.677)
C3': (30.013,31.075,23.968)
C1': (28.694,31.144,22.014)
O4': (28.144,30.194,22.889)
C5': (28.336,29.586,25.186)
P: (26.500,30.605,26.757)
O2: (28.864,33.064,20.204)
C4': (29.083,29.876,23.924)
C2': (30.082,31.517,22.527)
O2': (31.041,30.748,21.831)
N1: (27.781,32.282,21.936)
N3: (27.095,34.231,20.792)
N4: (25.283,35.371,21.439)
C6: (26.734,32.402,22.787)
C5: (25.865,33.425,22.684)
O3': (31.276,30.753,24.491)
OP1: (26.990,29.906,27.997)
OP2: (25.785,31.895,26.900)
C4: (26.091,34.349,21.631)
O5': (27.676,30.740,25.677)
C3': (30.013,31.075,23.968)
C1': (28.694,31.144,22.014)
O4': (28.144,30.194,22.889)
C5': (28.336,29.586,25.186)
P: (26.500,30.605,26.757)
O2: (28.864,33.064,20.204)
C4': (29.083,29.876,23.924)
C2': (30.082,31.517,22.527)
O2': (31.041,30.748,21.831)
N1: (27.781,32.282,21.936)
N3: (27.095,34.231,20.792)
N4: (25.283,35.371,21.439)
C6: (26.734,32.402,22.787)
C5: (25.865,33.425,22.684)
O3': (31.276,30.753,24.491)
Image (generated by PyMOL):