Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1381:A1382
Extra
PDB:
ATOM 1 O3' C A1380 62.610 180.905 64.708 1.00 47.80 O
ATOM 2 P U A1381 61.186 181.005 65.411 1.00 49.13 P
ATOM 3 OP1 U A1381 61.287 182.175 66.299 1.00 49.24 O
ATOM 4 OP2 U A1381 60.821 179.673 65.982 1.00 50.24 O
ATOM 5 O5' U A1381 60.204 181.313 64.195 1.00 51.03 O
ATOM 6 C5' U A1381 60.288 182.553 63.477 1.00 53.46 C
ATOM 7 C4' U A1381 59.141 182.667 62.508 1.00 54.41 C
ATOM 8 O4' U A1381 59.317 181.684 61.461 1.00 54.41 O
ATOM 9 C3' U A1381 57.777 182.360 63.102 1.00 55.11 C
ATOM 10 O3' U A1381 57.231 183.505 63.763 1.00 57.04 O
ATOM 11 C2' U A1381 56.984 181.909 61.882 1.00 55.46 C
ATOM 12 O2' U A1381 56.494 182.971 61.096 1.00 55.48 O
ATOM 13 C1' U A1381 58.059 181.167 61.081 1.00 55.39 C
ATOM 14 N1 U A1381 58.059 179.709 61.285 1.00 56.11 N
ATOM 15 C2 U A1381 57.156 178.975 60.546 1.00 57.34 C
ATOM 16 O2 U A1381 56.400 179.485 59.718 1.00 59.84 O
ATOM 17 N3 U A1381 57.164 177.624 60.796 1.00 56.86 N
ATOM 18 C4 U A1381 57.974 176.947 61.674 1.00 56.02 C
ATOM 19 O4 U A1381 57.871 175.722 61.765 1.00 54.51 O
ATOM 20 C5 U A1381 58.896 177.773 62.388 1.00 55.61 C
ATOM 21 C6 U A1381 58.906 179.092 62.175 1.00 55.34 C
ATOM 22 P C A1382 56.091 183.320 64.887 1.00 59.44 P
ATOM 23 OP1 C A1382 55.815 184.666 65.471 1.00 58.36 O
ATOM 24 OP2 C A1382 56.470 182.200 65.787 1.00 59.24 O
ATOM 25 O5' C A1382 54.804 182.874 64.056 1.00 56.85 O
TER
ATOM 1 O3' U B1381 57.231 183.505 63.763 1.00 57.04 O
ATOM 2 P C B1382 56.091 183.320 64.887 1.00 59.44 P
ATOM 3 OP1 C B1382 55.815 184.666 65.471 1.00 58.36 O
ATOM 4 OP2 C B1382 56.470 182.200 65.787 1.00 59.24 O
ATOM 5 O5' C B1382 54.804 182.874 64.056 1.00 56.85 O
ATOM 6 C5' C B1382 54.187 183.774 63.114 1.00 53.42 C
ATOM 7 C4' C B1382 53.137 183.054 62.304 1.00 52.03 C
ATOM 8 O4' C B1382 53.747 182.022 61.485 1.00 50.14 O
ATOM 9 C3' C B1382 52.112 182.314 63.135 1.00 51.65 C
ATOM 10 O3' C B1382 51.066 183.173 63.557 1.00 52.61 O
ATOM 11 C2' C B1382 51.604 181.254 62.175 1.00 51.25 C
ATOM 12 O2' C B1382 50.632 181.806 61.315 1.00 50.66 O
ATOM 13 C1' C B1382 52.881 180.903 61.397 1.00 50.14 C
ATOM 14 N1 C B1382 53.603 179.708 61.893 1.00 49.64 N
ATOM 15 C2 C B1382 53.179 178.433 61.489 1.00 49.17 C
ATOM 16 O2 C B1382 52.261 178.335 60.663 1.00 50.94 O
ATOM 17 N3 C B1382 53.783 177.339 62.003 1.00 49.39 N
ATOM 18 C4 C B1382 54.782 177.474 62.875 1.00 49.64 C
ATOM 19 N4 C B1382 55.309 176.366 63.400 1.00 49.46 N
ATOM 20 C5 C B1382 55.274 178.753 63.261 1.00 50.34 C
ATOM 21 C6 C B1382 54.659 179.834 62.754 1.00 50.30 C
ATOM 22 P A B1383 50.237 182.797 64.862 1.00 54.20 P
ATOM 23 OP1 A B1383 49.286 183.880 65.182 1.00 55.83 O
ATOM 24 OP2 A B1383 51.301 182.450 65.838 1.00 55.99 O
ATOM 25 O5' A B1383 49.420 181.502 64.409 1.00 52.84 O
TER
ATOM 2 P U A1381 61.186 181.005 65.411 1.00 49.13 P
ATOM 3 OP1 U A1381 61.287 182.175 66.299 1.00 49.24 O
ATOM 4 OP2 U A1381 60.821 179.673 65.982 1.00 50.24 O
ATOM 5 O5' U A1381 60.204 181.313 64.195 1.00 51.03 O
ATOM 6 C5' U A1381 60.288 182.553 63.477 1.00 53.46 C
ATOM 7 C4' U A1381 59.141 182.667 62.508 1.00 54.41 C
ATOM 8 O4' U A1381 59.317 181.684 61.461 1.00 54.41 O
ATOM 9 C3' U A1381 57.777 182.360 63.102 1.00 55.11 C
ATOM 10 O3' U A1381 57.231 183.505 63.763 1.00 57.04 O
ATOM 11 C2' U A1381 56.984 181.909 61.882 1.00 55.46 C
ATOM 12 O2' U A1381 56.494 182.971 61.096 1.00 55.48 O
ATOM 13 C1' U A1381 58.059 181.167 61.081 1.00 55.39 C
ATOM 14 N1 U A1381 58.059 179.709 61.285 1.00 56.11 N
ATOM 15 C2 U A1381 57.156 178.975 60.546 1.00 57.34 C
ATOM 16 O2 U A1381 56.400 179.485 59.718 1.00 59.84 O
ATOM 17 N3 U A1381 57.164 177.624 60.796 1.00 56.86 N
ATOM 18 C4 U A1381 57.974 176.947 61.674 1.00 56.02 C
ATOM 19 O4 U A1381 57.871 175.722 61.765 1.00 54.51 O
ATOM 20 C5 U A1381 58.896 177.773 62.388 1.00 55.61 C
ATOM 21 C6 U A1381 58.906 179.092 62.175 1.00 55.34 C
ATOM 22 P C A1382 56.091 183.320 64.887 1.00 59.44 P
ATOM 23 OP1 C A1382 55.815 184.666 65.471 1.00 58.36 O
ATOM 24 OP2 C A1382 56.470 182.200 65.787 1.00 59.24 O
ATOM 25 O5' C A1382 54.804 182.874 64.056 1.00 56.85 O
TER
ATOM 1 O3' U B1381 57.231 183.505 63.763 1.00 57.04 O
ATOM 2 P C B1382 56.091 183.320 64.887 1.00 59.44 P
ATOM 3 OP1 C B1382 55.815 184.666 65.471 1.00 58.36 O
ATOM 4 OP2 C B1382 56.470 182.200 65.787 1.00 59.24 O
ATOM 5 O5' C B1382 54.804 182.874 64.056 1.00 56.85 O
ATOM 6 C5' C B1382 54.187 183.774 63.114 1.00 53.42 C
ATOM 7 C4' C B1382 53.137 183.054 62.304 1.00 52.03 C
ATOM 8 O4' C B1382 53.747 182.022 61.485 1.00 50.14 O
ATOM 9 C3' C B1382 52.112 182.314 63.135 1.00 51.65 C
ATOM 10 O3' C B1382 51.066 183.173 63.557 1.00 52.61 O
ATOM 11 C2' C B1382 51.604 181.254 62.175 1.00 51.25 C
ATOM 12 O2' C B1382 50.632 181.806 61.315 1.00 50.66 O
ATOM 13 C1' C B1382 52.881 180.903 61.397 1.00 50.14 C
ATOM 14 N1 C B1382 53.603 179.708 61.893 1.00 49.64 N
ATOM 15 C2 C B1382 53.179 178.433 61.489 1.00 49.17 C
ATOM 16 O2 C B1382 52.261 178.335 60.663 1.00 50.94 O
ATOM 17 N3 C B1382 53.783 177.339 62.003 1.00 49.39 N
ATOM 18 C4 C B1382 54.782 177.474 62.875 1.00 49.64 C
ATOM 19 N4 C B1382 55.309 176.366 63.400 1.00 49.46 N
ATOM 20 C5 C B1382 55.274 178.753 63.261 1.00 50.34 C
ATOM 21 C6 C B1382 54.659 179.834 62.754 1.00 50.30 C
ATOM 22 P A B1383 50.237 182.797 64.862 1.00 54.20 P
ATOM 23 OP1 A B1383 49.286 183.880 65.182 1.00 55.83 O
ATOM 24 OP2 A B1383 51.301 182.450 65.838 1.00 55.99 O
ATOM 25 O5' A B1383 49.420 181.502 64.409 1.00 52.84 O
TER
Atoms:
C4: (57.974,176.947,61.674)
N3: (57.164,177.624,60.796)
OP1: (61.287,182.175,66.299)
OP2: (60.821,179.673,65.982)
C2: (57.156,178.975,60.546)
C1': (58.059,181.167,61.081)
C3': (57.777,182.360,63.102)
O5': (60.204,181.313,64.195)
O4': (59.317,181.684,61.461)
C5': (60.288,182.553,63.477)
P: (61.186,181.005,65.411)
C4': (59.141,182.667,62.508)
C2': (56.984,181.909,61.882)
O2': (56.494,182.971,61.096)
N1: (58.059,179.709,61.285)
O4: (57.871,175.722,61.765)
O2: (56.400,179.485,59.718)
C6: (58.906,179.092,62.175)
C5: (58.896,177.773,62.388)
O3': (57.231,183.505,63.763)
N3: (57.164,177.624,60.796)
OP1: (61.287,182.175,66.299)
OP2: (60.821,179.673,65.982)
C2: (57.156,178.975,60.546)
C1': (58.059,181.167,61.081)
C3': (57.777,182.360,63.102)
O5': (60.204,181.313,64.195)
O4': (59.317,181.684,61.461)
C5': (60.288,182.553,63.477)
P: (61.186,181.005,65.411)
C4': (59.141,182.667,62.508)
C2': (56.984,181.909,61.882)
O2': (56.494,182.971,61.096)
N1: (58.059,179.709,61.285)
O4: (57.871,175.722,61.765)
O2: (56.400,179.485,59.718)
C6: (58.906,179.092,62.175)
C5: (58.896,177.773,62.388)
O3': (57.231,183.505,63.763)
C2: (53.179,178.433,61.489)
OP1: (55.815,184.666,65.471)
OP2: (56.470,182.200,65.787)
C4: (54.782,177.474,62.875)
O5': (54.804,182.874,64.056)
C3': (52.112,182.314,63.135)
C1': (52.881,180.903,61.397)
O4': (53.747,182.022,61.485)
C5': (54.187,183.774,63.114)
P: (56.091,183.320,64.887)
O2: (52.261,178.335,60.663)
C4': (53.137,183.054,62.304)
C2': (51.604,181.254,62.175)
O2': (50.632,181.806,61.315)
N1: (53.603,179.708,61.893)
N3: (53.783,177.339,62.003)
N4: (55.309,176.366,63.400)
C6: (54.659,179.834,62.754)
C5: (55.274,178.753,63.261)
O3': (51.066,183.173,63.557)
OP1: (55.815,184.666,65.471)
OP2: (56.470,182.200,65.787)
C4: (54.782,177.474,62.875)
O5': (54.804,182.874,64.056)
C3': (52.112,182.314,63.135)
C1': (52.881,180.903,61.397)
O4': (53.747,182.022,61.485)
C5': (54.187,183.774,63.114)
P: (56.091,183.320,64.887)
O2: (52.261,178.335,60.663)
C4': (53.137,183.054,62.304)
C2': (51.604,181.254,62.175)
O2': (50.632,181.806,61.315)
N1: (53.603,179.708,61.893)
N3: (53.783,177.339,62.003)
N4: (55.309,176.366,63.400)
C6: (54.659,179.834,62.754)
C5: (55.274,178.753,63.261)
O3': (51.066,183.173,63.557)
Image (generated by PyMOL):