Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0431:0429
Extra
PDB:
ATOM 1 O3' A A 430 54.179 133.792 36.276 1.00 50.95 O
ATOM 2 P C A 431 52.603 134.106 36.314 1.00 53.98 P
ATOM 3 OP1 C A 431 52.410 135.491 36.809 1.00 53.55 O
ATOM 4 OP2 C A 431 51.910 132.985 37.002 1.00 54.68 O
ATOM 5 O5' C A 431 52.194 134.062 34.777 1.00 53.32 O
ATOM 6 C5' C A 431 52.729 135.018 33.846 1.00 51.50 C
ATOM 7 C4' C A 431 52.247 134.713 32.454 1.00 50.24 C
ATOM 8 O4' C A 431 52.887 133.508 31.966 1.00 50.79 O
ATOM 9 C3' C A 431 50.765 134.414 32.345 1.00 50.12 C
ATOM 10 O3' C A 431 49.989 135.601 32.332 1.00 49.69 O
ATOM 11 C2' C A 431 50.692 133.613 31.053 1.00 51.23 C
ATOM 12 O2' C A 431 50.743 134.411 29.884 1.00 52.27 O
ATOM 13 C1' C A 431 51.975 132.784 31.155 1.00 51.35 C
ATOM 14 N1 C A 431 51.767 131.448 31.751 1.00 51.56 N
ATOM 15 C2 C A 431 51.323 130.404 30.924 1.00 51.71 C
ATOM 16 O2 C A 431 51.119 130.635 29.721 1.00 51.22 O
ATOM 17 N3 C A 431 51.129 129.172 31.457 1.00 51.76 N
ATOM 18 C4 C A 431 51.363 128.962 32.753 1.00 51.26 C
ATOM 19 N4 C A 431 51.162 127.734 33.231 1.00 49.73 N
ATOM 20 C5 C A 431 51.816 130.004 33.617 1.00 52.23 C
ATOM 21 C6 C A 431 52.003 131.219 33.080 1.00 51.27 C
ATOM 22 P C A 432 48.524 135.594 32.981 1.00 48.98 P
ATOM 23 OP1 C A 432 48.070 137.003 33.106 1.00 49.60 O
ATOM 24 OP2 C A 432 48.554 134.731 34.183 1.00 50.00 O
ATOM 25 O5' C A 432 47.643 134.884 31.866 1.00 47.87 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
ATOM 2 P C A 431 52.603 134.106 36.314 1.00 53.98 P
ATOM 3 OP1 C A 431 52.410 135.491 36.809 1.00 53.55 O
ATOM 4 OP2 C A 431 51.910 132.985 37.002 1.00 54.68 O
ATOM 5 O5' C A 431 52.194 134.062 34.777 1.00 53.32 O
ATOM 6 C5' C A 431 52.729 135.018 33.846 1.00 51.50 C
ATOM 7 C4' C A 431 52.247 134.713 32.454 1.00 50.24 C
ATOM 8 O4' C A 431 52.887 133.508 31.966 1.00 50.79 O
ATOM 9 C3' C A 431 50.765 134.414 32.345 1.00 50.12 C
ATOM 10 O3' C A 431 49.989 135.601 32.332 1.00 49.69 O
ATOM 11 C2' C A 431 50.692 133.613 31.053 1.00 51.23 C
ATOM 12 O2' C A 431 50.743 134.411 29.884 1.00 52.27 O
ATOM 13 C1' C A 431 51.975 132.784 31.155 1.00 51.35 C
ATOM 14 N1 C A 431 51.767 131.448 31.751 1.00 51.56 N
ATOM 15 C2 C A 431 51.323 130.404 30.924 1.00 51.71 C
ATOM 16 O2 C A 431 51.119 130.635 29.721 1.00 51.22 O
ATOM 17 N3 C A 431 51.129 129.172 31.457 1.00 51.76 N
ATOM 18 C4 C A 431 51.363 128.962 32.753 1.00 51.26 C
ATOM 19 N4 C A 431 51.162 127.734 33.231 1.00 49.73 N
ATOM 20 C5 C A 431 51.816 130.004 33.617 1.00 52.23 C
ATOM 21 C6 C A 431 52.003 131.219 33.080 1.00 51.27 C
ATOM 22 P C A 432 48.524 135.594 32.981 1.00 48.98 P
ATOM 23 OP1 C A 432 48.070 137.003 33.106 1.00 49.60 O
ATOM 24 OP2 C A 432 48.554 134.731 34.183 1.00 50.00 O
ATOM 25 O5' C A 432 47.643 134.884 31.866 1.00 47.87 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
Atoms:
C2: (51.323,130.404,30.924)
OP1: (52.410,135.491,36.809)
OP2: (51.910,132.985,37.002)
C4: (51.363,128.962,32.753)
O5': (52.194,134.062,34.777)
C3': (50.765,134.414,32.345)
C1': (51.975,132.784,31.155)
O4': (52.887,133.508,31.966)
C5': (52.729,135.018,33.846)
P: (52.603,134.106,36.314)
O2: (51.119,130.635,29.721)
C4': (52.247,134.713,32.454)
C2': (50.692,133.613,31.053)
O2': (50.743,134.411,29.884)
N1: (51.767,131.448,31.751)
N3: (51.129,129.172,31.457)
N4: (51.162,127.734,33.231)
C6: (52.003,131.219,33.080)
C5: (51.816,130.004,33.617)
O3': (49.989,135.601,32.332)
OP1: (52.410,135.491,36.809)
OP2: (51.910,132.985,37.002)
C4: (51.363,128.962,32.753)
O5': (52.194,134.062,34.777)
C3': (50.765,134.414,32.345)
C1': (51.975,132.784,31.155)
O4': (52.887,133.508,31.966)
C5': (52.729,135.018,33.846)
P: (52.603,134.106,36.314)
O2: (51.119,130.635,29.721)
C4': (52.247,134.713,32.454)
C2': (50.692,133.613,31.053)
O2': (50.743,134.411,29.884)
N1: (51.767,131.448,31.751)
N3: (51.129,129.172,31.457)
N4: (51.162,127.734,33.231)
C6: (52.003,131.219,33.080)
C5: (51.816,130.004,33.617)
O3': (49.989,135.601,32.332)
OP1: (55.197,122.379,40.088)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
Image (generated by PyMOL):