Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01225:01226
Extra
PDB:
ATOM 1 O3' G A1224 1.173 95.753 90.427 1.00 52.59 O
ATOM 2 P U A1225 1.854 95.454 89.004 1.00 51.67 P
ATOM 3 OP1 U A1225 0.839 94.844 88.107 1.00 51.84 O
ATOM 4 OP2 U A1225 3.121 94.730 89.263 1.00 52.14 O
ATOM 5 O5' U A1225 2.236 96.901 88.459 1.00 50.48 O
ATOM 6 C5' U A1225 1.217 97.849 88.092 1.00 49.15 C
ATOM 7 C4' U A1225 1.842 99.131 87.586 1.00 48.00 C
ATOM 8 O4' U A1225 2.547 99.794 88.672 1.00 46.90 O
ATOM 9 C3' U A1225 2.898 98.984 86.501 1.00 47.21 C
ATOM 10 O3' U A1225 2.361 98.811 85.198 1.00 46.76 O
ATOM 11 C2' U A1225 3.668 100.286 86.638 1.00 48.36 C
ATOM 12 O2' U A1225 3.012 101.388 86.040 1.00 50.05 O
ATOM 13 C1' U A1225 3.703 100.447 88.161 1.00 48.54 C
ATOM 14 N1 U A1225 4.903 99.798 88.719 1.00 48.61 N
ATOM 15 C2 U A1225 6.082 100.524 88.748 1.00 47.58 C
ATOM 16 O2 U A1225 6.162 101.689 88.409 1.00 46.90 O
ATOM 17 N3 U A1225 7.171 99.833 89.193 1.00 48.39 N
ATOM 18 C4 U A1225 7.210 98.532 89.616 1.00 49.53 C
ATOM 19 O4 U A1225 8.297 98.019 89.866 1.00 50.49 O
ATOM 20 C5 U A1225 5.951 97.862 89.604 1.00 49.69 C
ATOM 21 C6 U A1225 4.869 98.500 89.170 1.00 48.38 C
ATOM 22 P C A1226 3.281 98.189 84.040 1.00 47.96 P
ATOM 23 OP1 C A1226 2.478 98.092 82.795 1.00 48.96 O
ATOM 24 OP2 C A1226 3.912 96.970 84.589 1.00 47.25 O
ATOM 25 O5' C A1226 4.402 99.296 83.810 1.00 46.72 O
TER
ATOM 1 O3' U B1225 2.361 98.811 85.198 1.00 46.76 O
ATOM 2 P C B1226 3.281 98.189 84.040 1.00 47.96 P
ATOM 3 OP1 C B1226 2.478 98.092 82.795 1.00 48.96 O
ATOM 4 OP2 C B1226 3.912 96.970 84.589 1.00 47.25 O
ATOM 5 O5' C B1226 4.402 99.296 83.810 1.00 46.72 O
ATOM 6 C5' C B1226 4.065 100.610 83.326 1.00 45.92 C
ATOM 7 C4' C B1226 5.300 101.479 83.267 1.00 47.48 C
ATOM 8 O4' C B1226 5.838 101.614 84.610 1.00 48.30 O
ATOM 9 C3' C B1226 6.461 100.925 82.454 1.00 48.09 C
ATOM 10 O3' C B1226 6.351 101.188 81.060 1.00 47.46 O
ATOM 11 C2' C B1226 7.660 101.617 83.087 1.00 50.19 C
ATOM 12 O2' C B1226 7.869 102.948 82.650 1.00 51.54 O
ATOM 13 C1' C B1226 7.258 101.611 84.562 1.00 50.76 C
ATOM 14 N1 C B1226 7.765 100.407 85.258 1.00 53.01 N
ATOM 15 C2 C B1226 9.135 100.328 85.551 1.00 54.34 C
ATOM 16 O2 C B1226 9.869 101.285 85.263 1.00 56.91 O
ATOM 17 N3 C B1226 9.625 99.214 86.133 1.00 55.07 N
ATOM 18 C4 C B1226 8.813 98.200 86.419 1.00 55.29 C
ATOM 19 N4 C B1226 9.356 97.098 86.944 1.00 54.66 N
ATOM 20 C5 C B1226 7.409 98.264 86.167 1.00 55.06 C
ATOM 21 C6 C B1226 6.933 99.375 85.593 1.00 53.41 C
ATOM 22 P C B1227 7.195 100.297 80.014 1.00 51.42 P
ATOM 23 OP1 C B1227 6.882 100.773 78.636 1.00 48.83 O
ATOM 24 OP2 C B1227 7.022 98.859 80.350 1.00 48.36 O
ATOM 25 O5' C B1227 8.713 100.654 80.335 1.00 49.88 O
TER
ATOM 2 P U A1225 1.854 95.454 89.004 1.00 51.67 P
ATOM 3 OP1 U A1225 0.839 94.844 88.107 1.00 51.84 O
ATOM 4 OP2 U A1225 3.121 94.730 89.263 1.00 52.14 O
ATOM 5 O5' U A1225 2.236 96.901 88.459 1.00 50.48 O
ATOM 6 C5' U A1225 1.217 97.849 88.092 1.00 49.15 C
ATOM 7 C4' U A1225 1.842 99.131 87.586 1.00 48.00 C
ATOM 8 O4' U A1225 2.547 99.794 88.672 1.00 46.90 O
ATOM 9 C3' U A1225 2.898 98.984 86.501 1.00 47.21 C
ATOM 10 O3' U A1225 2.361 98.811 85.198 1.00 46.76 O
ATOM 11 C2' U A1225 3.668 100.286 86.638 1.00 48.36 C
ATOM 12 O2' U A1225 3.012 101.388 86.040 1.00 50.05 O
ATOM 13 C1' U A1225 3.703 100.447 88.161 1.00 48.54 C
ATOM 14 N1 U A1225 4.903 99.798 88.719 1.00 48.61 N
ATOM 15 C2 U A1225 6.082 100.524 88.748 1.00 47.58 C
ATOM 16 O2 U A1225 6.162 101.689 88.409 1.00 46.90 O
ATOM 17 N3 U A1225 7.171 99.833 89.193 1.00 48.39 N
ATOM 18 C4 U A1225 7.210 98.532 89.616 1.00 49.53 C
ATOM 19 O4 U A1225 8.297 98.019 89.866 1.00 50.49 O
ATOM 20 C5 U A1225 5.951 97.862 89.604 1.00 49.69 C
ATOM 21 C6 U A1225 4.869 98.500 89.170 1.00 48.38 C
ATOM 22 P C A1226 3.281 98.189 84.040 1.00 47.96 P
ATOM 23 OP1 C A1226 2.478 98.092 82.795 1.00 48.96 O
ATOM 24 OP2 C A1226 3.912 96.970 84.589 1.00 47.25 O
ATOM 25 O5' C A1226 4.402 99.296 83.810 1.00 46.72 O
TER
ATOM 1 O3' U B1225 2.361 98.811 85.198 1.00 46.76 O
ATOM 2 P C B1226 3.281 98.189 84.040 1.00 47.96 P
ATOM 3 OP1 C B1226 2.478 98.092 82.795 1.00 48.96 O
ATOM 4 OP2 C B1226 3.912 96.970 84.589 1.00 47.25 O
ATOM 5 O5' C B1226 4.402 99.296 83.810 1.00 46.72 O
ATOM 6 C5' C B1226 4.065 100.610 83.326 1.00 45.92 C
ATOM 7 C4' C B1226 5.300 101.479 83.267 1.00 47.48 C
ATOM 8 O4' C B1226 5.838 101.614 84.610 1.00 48.30 O
ATOM 9 C3' C B1226 6.461 100.925 82.454 1.00 48.09 C
ATOM 10 O3' C B1226 6.351 101.188 81.060 1.00 47.46 O
ATOM 11 C2' C B1226 7.660 101.617 83.087 1.00 50.19 C
ATOM 12 O2' C B1226 7.869 102.948 82.650 1.00 51.54 O
ATOM 13 C1' C B1226 7.258 101.611 84.562 1.00 50.76 C
ATOM 14 N1 C B1226 7.765 100.407 85.258 1.00 53.01 N
ATOM 15 C2 C B1226 9.135 100.328 85.551 1.00 54.34 C
ATOM 16 O2 C B1226 9.869 101.285 85.263 1.00 56.91 O
ATOM 17 N3 C B1226 9.625 99.214 86.133 1.00 55.07 N
ATOM 18 C4 C B1226 8.813 98.200 86.419 1.00 55.29 C
ATOM 19 N4 C B1226 9.356 97.098 86.944 1.00 54.66 N
ATOM 20 C5 C B1226 7.409 98.264 86.167 1.00 55.06 C
ATOM 21 C6 C B1226 6.933 99.375 85.593 1.00 53.41 C
ATOM 22 P C B1227 7.195 100.297 80.014 1.00 51.42 P
ATOM 23 OP1 C B1227 6.882 100.773 78.636 1.00 48.83 O
ATOM 24 OP2 C B1227 7.022 98.859 80.350 1.00 48.36 O
ATOM 25 O5' C B1227 8.713 100.654 80.335 1.00 49.88 O
TER
Atoms:
C4: (7.210,98.532,89.616)
N3: (7.171,99.833,89.193)
OP1: (0.839,94.844,88.107)
OP2: (3.121,94.730,89.263)
C2: (6.082,100.524,88.748)
C1': (3.703,100.447,88.161)
C3': (2.898,98.984,86.501)
O5': (2.236,96.901,88.459)
O4': (2.547,99.794,88.672)
C5': (1.217,97.849,88.092)
P: (1.854,95.454,89.004)
C4': (1.842,99.131,87.586)
C2': (3.668,100.286,86.638)
O2': (3.012,101.388,86.040)
N1: (4.903,99.798,88.719)
O4: (8.297,98.019,89.866)
O2: (6.162,101.689,88.409)
C6: (4.869,98.500,89.170)
C5: (5.951,97.862,89.604)
O3': (2.361,98.811,85.198)
N3: (7.171,99.833,89.193)
OP1: (0.839,94.844,88.107)
OP2: (3.121,94.730,89.263)
C2: (6.082,100.524,88.748)
C1': (3.703,100.447,88.161)
C3': (2.898,98.984,86.501)
O5': (2.236,96.901,88.459)
O4': (2.547,99.794,88.672)
C5': (1.217,97.849,88.092)
P: (1.854,95.454,89.004)
C4': (1.842,99.131,87.586)
C2': (3.668,100.286,86.638)
O2': (3.012,101.388,86.040)
N1: (4.903,99.798,88.719)
O4: (8.297,98.019,89.866)
O2: (6.162,101.689,88.409)
C6: (4.869,98.500,89.170)
C5: (5.951,97.862,89.604)
O3': (2.361,98.811,85.198)
C2: (9.135,100.328,85.551)
OP1: (2.478,98.092,82.795)
OP2: (3.912,96.970,84.589)
C4: (8.813,98.200,86.419)
O5': (4.402,99.296,83.810)
C3': (6.461,100.925,82.454)
C1': (7.258,101.611,84.562)
O4': (5.838,101.614,84.610)
C5': (4.065,100.610,83.326)
P: (3.281,98.189,84.040)
O2: (9.869,101.285,85.263)
C4': (5.300,101.479,83.267)
C2': (7.660,101.617,83.087)
O2': (7.869,102.948,82.650)
N1: (7.765,100.407,85.258)
N3: (9.625,99.214,86.133)
N4: (9.356,97.098,86.944)
C6: (6.933,99.375,85.593)
C5: (7.409,98.264,86.167)
O3': (6.351,101.188,81.060)
OP1: (2.478,98.092,82.795)
OP2: (3.912,96.970,84.589)
C4: (8.813,98.200,86.419)
O5': (4.402,99.296,83.810)
C3': (6.461,100.925,82.454)
C1': (7.258,101.611,84.562)
O4': (5.838,101.614,84.610)
C5': (4.065,100.610,83.326)
P: (3.281,98.189,84.040)
O2: (9.869,101.285,85.263)
C4': (5.300,101.479,83.267)
C2': (7.660,101.617,83.087)
O2': (7.869,102.948,82.650)
N1: (7.765,100.407,85.258)
N3: (9.625,99.214,86.133)
N4: (9.356,97.098,86.944)
C6: (6.933,99.375,85.593)
C5: (7.409,98.264,86.167)
O3': (6.351,101.188,81.060)
Image (generated by PyMOL):