Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNO:A3:A4
Extra
PDB:
ATOM 1 O3' G A 2 -6.656 -14.143 13.159 1.00 76.86 O
ATOM 2 P U A 3 -6.409 -13.001 12.060 1.00 79.08 P
ATOM 3 OP1 U A 3 -4.966 -12.660 12.052 1.00 79.36 O
ATOM 4 OP2 U A 3 -7.414 -11.937 12.326 1.00 78.16 O
ATOM 5 O5' U A 3 -6.762 -13.718 10.681 1.00 72.60 O
ATOM 6 C5' U A 3 -6.085 -14.899 10.285 1.00 74.97 C
ATOM 7 C4' U A 3 -6.668 -15.433 9.000 1.00 77.40 C
ATOM 8 O4' U A 3 -8.041 -15.858 9.217 1.00 80.27 O
ATOM 9 C3' U A 3 -6.744 -14.446 7.847 1.00 80.10 C
ATOM 10 O3' U A 3 -5.507 -14.422 7.147 1.00 85.27 O
ATOM 11 C2' U A 3 -7.878 -15.031 7.014 1.00 78.91 C
ATOM 12 O2' U A 3 -7.492 -16.172 6.277 1.00 77.33 O
ATOM 13 C1' U A 3 -8.846 -15.467 8.112 1.00 77.32 C
ATOM 14 N1 U A 3 -9.775 -14.421 8.567 1.00 73.17 N
ATOM 15 C2 U A 3 -10.957 -14.271 7.880 1.00 70.44 C
ATOM 16 O2 U A 3 -11.233 -14.925 6.891 1.00 67.94 O
ATOM 17 N3 U A 3 -11.805 -13.321 8.394 1.00 71.22 N
ATOM 18 C4 U A 3 -11.588 -12.514 9.499 1.00 70.34 C
ATOM 19 O4 U A 3 -12.481 -11.750 9.880 1.00 72.34 O
ATOM 20 C5 U A 3 -10.327 -12.707 10.135 1.00 67.60 C
ATOM 21 C6 U A 3 -9.485 -13.628 9.660 1.00 72.67 C
ATOM 22 P C A 4 -4.818 -13.013 6.787 1.00 88.32 P
ATOM 23 OP1 C A 4 -3.376 -13.289 6.567 1.00 91.67 O
ATOM 24 OP2 C A 4 -5.217 -11.992 7.790 1.00 86.75 O
ATOM 25 O5' C A 4 -5.457 -12.653 5.374 1.00 86.28 O
TER
ATOM 1 O3' U B 3 -5.507 -14.422 7.147 1.00 85.27 O
ATOM 2 P C B 4 -4.818 -13.013 6.787 1.00 88.32 P
ATOM 3 OP1 C B 4 -3.376 -13.289 6.567 1.00 91.67 O
ATOM 4 OP2 C B 4 -5.217 -11.992 7.790 1.00 86.75 O
ATOM 5 O5' C B 4 -5.457 -12.653 5.374 1.00 86.28 O
ATOM 6 C5' C B 4 -5.306 -13.550 4.281 1.00 87.15 C
ATOM 7 C4' C B 4 -6.495 -13.459 3.365 1.00 88.32 C
ATOM 8 O4' C B 4 -7.693 -13.753 4.127 1.00 88.93 O
ATOM 9 C3' C B 4 -6.765 -12.078 2.796 1.00 90.39 C
ATOM 10 O3' C B 4 -5.975 -11.859 1.638 1.00 92.16 O
ATOM 11 C2' C B 4 -8.242 -12.174 2.437 1.00 89.06 C
ATOM 12 O2' C B 4 -8.475 -12.811 1.197 1.00 89.47 O
ATOM 13 C1' C B 4 -8.781 -13.014 3.599 1.00 85.48 C
ATOM 14 N1 C B 4 -9.359 -12.191 4.675 1.00 79.20 N
ATOM 15 C2 C B 4 -10.730 -11.934 4.645 1.00 77.26 C
ATOM 16 O2 C B 4 -11.401 -12.421 3.728 1.00 76.95 O
ATOM 17 N3 C B 4 -11.288 -11.164 5.610 1.00 73.99 N
ATOM 18 C4 C B 4 -10.523 -10.657 6.581 1.00 72.83 C
ATOM 19 N4 C B 4 -11.115 -9.891 7.507 1.00 68.45 N
ATOM 20 C5 C B 4 -9.116 -10.912 6.643 1.00 73.70 C
ATOM 21 C6 C B 4 -8.582 -11.679 5.678 1.00 77.31 C
ATOM 22 P A B 5 -5.213 -10.458 1.450 1.00 94.25 P
ATOM 23 OP1 A B 5 -4.313 -10.263 2.620 1.00 89.36 O
ATOM 24 OP2 A B 5 -6.225 -9.424 1.121 1.00 93.11 O
ATOM 25 O5' A B 5 -4.328 -10.708 0.152 1.00 90.95 O
TER
ATOM 2 P U A 3 -6.409 -13.001 12.060 1.00 79.08 P
ATOM 3 OP1 U A 3 -4.966 -12.660 12.052 1.00 79.36 O
ATOM 4 OP2 U A 3 -7.414 -11.937 12.326 1.00 78.16 O
ATOM 5 O5' U A 3 -6.762 -13.718 10.681 1.00 72.60 O
ATOM 6 C5' U A 3 -6.085 -14.899 10.285 1.00 74.97 C
ATOM 7 C4' U A 3 -6.668 -15.433 9.000 1.00 77.40 C
ATOM 8 O4' U A 3 -8.041 -15.858 9.217 1.00 80.27 O
ATOM 9 C3' U A 3 -6.744 -14.446 7.847 1.00 80.10 C
ATOM 10 O3' U A 3 -5.507 -14.422 7.147 1.00 85.27 O
ATOM 11 C2' U A 3 -7.878 -15.031 7.014 1.00 78.91 C
ATOM 12 O2' U A 3 -7.492 -16.172 6.277 1.00 77.33 O
ATOM 13 C1' U A 3 -8.846 -15.467 8.112 1.00 77.32 C
ATOM 14 N1 U A 3 -9.775 -14.421 8.567 1.00 73.17 N
ATOM 15 C2 U A 3 -10.957 -14.271 7.880 1.00 70.44 C
ATOM 16 O2 U A 3 -11.233 -14.925 6.891 1.00 67.94 O
ATOM 17 N3 U A 3 -11.805 -13.321 8.394 1.00 71.22 N
ATOM 18 C4 U A 3 -11.588 -12.514 9.499 1.00 70.34 C
ATOM 19 O4 U A 3 -12.481 -11.750 9.880 1.00 72.34 O
ATOM 20 C5 U A 3 -10.327 -12.707 10.135 1.00 67.60 C
ATOM 21 C6 U A 3 -9.485 -13.628 9.660 1.00 72.67 C
ATOM 22 P C A 4 -4.818 -13.013 6.787 1.00 88.32 P
ATOM 23 OP1 C A 4 -3.376 -13.289 6.567 1.00 91.67 O
ATOM 24 OP2 C A 4 -5.217 -11.992 7.790 1.00 86.75 O
ATOM 25 O5' C A 4 -5.457 -12.653 5.374 1.00 86.28 O
TER
ATOM 1 O3' U B 3 -5.507 -14.422 7.147 1.00 85.27 O
ATOM 2 P C B 4 -4.818 -13.013 6.787 1.00 88.32 P
ATOM 3 OP1 C B 4 -3.376 -13.289 6.567 1.00 91.67 O
ATOM 4 OP2 C B 4 -5.217 -11.992 7.790 1.00 86.75 O
ATOM 5 O5' C B 4 -5.457 -12.653 5.374 1.00 86.28 O
ATOM 6 C5' C B 4 -5.306 -13.550 4.281 1.00 87.15 C
ATOM 7 C4' C B 4 -6.495 -13.459 3.365 1.00 88.32 C
ATOM 8 O4' C B 4 -7.693 -13.753 4.127 1.00 88.93 O
ATOM 9 C3' C B 4 -6.765 -12.078 2.796 1.00 90.39 C
ATOM 10 O3' C B 4 -5.975 -11.859 1.638 1.00 92.16 O
ATOM 11 C2' C B 4 -8.242 -12.174 2.437 1.00 89.06 C
ATOM 12 O2' C B 4 -8.475 -12.811 1.197 1.00 89.47 O
ATOM 13 C1' C B 4 -8.781 -13.014 3.599 1.00 85.48 C
ATOM 14 N1 C B 4 -9.359 -12.191 4.675 1.00 79.20 N
ATOM 15 C2 C B 4 -10.730 -11.934 4.645 1.00 77.26 C
ATOM 16 O2 C B 4 -11.401 -12.421 3.728 1.00 76.95 O
ATOM 17 N3 C B 4 -11.288 -11.164 5.610 1.00 73.99 N
ATOM 18 C4 C B 4 -10.523 -10.657 6.581 1.00 72.83 C
ATOM 19 N4 C B 4 -11.115 -9.891 7.507 1.00 68.45 N
ATOM 20 C5 C B 4 -9.116 -10.912 6.643 1.00 73.70 C
ATOM 21 C6 C B 4 -8.582 -11.679 5.678 1.00 77.31 C
ATOM 22 P A B 5 -5.213 -10.458 1.450 1.00 94.25 P
ATOM 23 OP1 A B 5 -4.313 -10.263 2.620 1.00 89.36 O
ATOM 24 OP2 A B 5 -6.225 -9.424 1.121 1.00 93.11 O
ATOM 25 O5' A B 5 -4.328 -10.708 0.152 1.00 90.95 O
TER
Atoms:
C4: (-11.588,-12.514,9.499)
N3: (-11.805,-13.321,8.394)
OP1: (-4.966,-12.660,12.052)
OP2: (-7.414,-11.937,12.326)
C2: (-10.957,-14.271,7.880)
C1': (-8.846,-15.467,8.112)
C3': (-6.744,-14.446,7.847)
O5': (-6.762,-13.718,10.681)
O4': (-8.041,-15.858,9.217)
C5': (-6.085,-14.899,10.285)
P: (-6.409,-13.001,12.060)
C4': (-6.668,-15.433,9.000)
C2': (-7.878,-15.031,7.014)
O2': (-7.492,-16.172,6.277)
N1: (-9.775,-14.421,8.567)
O4: (-12.481,-11.750,9.880)
O2: (-11.233,-14.925,6.891)
C6: (-9.485,-13.628,9.660)
C5: (-10.327,-12.707,10.135)
O3': (-5.507,-14.422,7.147)
N3: (-11.805,-13.321,8.394)
OP1: (-4.966,-12.660,12.052)
OP2: (-7.414,-11.937,12.326)
C2: (-10.957,-14.271,7.880)
C1': (-8.846,-15.467,8.112)
C3': (-6.744,-14.446,7.847)
O5': (-6.762,-13.718,10.681)
O4': (-8.041,-15.858,9.217)
C5': (-6.085,-14.899,10.285)
P: (-6.409,-13.001,12.060)
C4': (-6.668,-15.433,9.000)
C2': (-7.878,-15.031,7.014)
O2': (-7.492,-16.172,6.277)
N1: (-9.775,-14.421,8.567)
O4: (-12.481,-11.750,9.880)
O2: (-11.233,-14.925,6.891)
C6: (-9.485,-13.628,9.660)
C5: (-10.327,-12.707,10.135)
O3': (-5.507,-14.422,7.147)
C2: (-10.730,-11.934,4.645)
OP1: (-3.376,-13.289,6.567)
OP2: (-5.217,-11.992,7.790)
C4: (-10.523,-10.657,6.581)
O5': (-5.457,-12.653,5.374)
C3': (-6.765,-12.078,2.796)
C1': (-8.781,-13.014,3.599)
O4': (-7.693,-13.753,4.127)
C5': (-5.306,-13.550,4.281)
P: (-4.818,-13.013,6.787)
O2: (-11.401,-12.421,3.728)
C4': (-6.495,-13.459,3.365)
C2': (-8.242,-12.174,2.437)
O2': (-8.475,-12.811,1.197)
N1: (-9.359,-12.191,4.675)
N3: (-11.288,-11.164,5.610)
N4: (-11.115,-9.891,7.507)
C6: (-8.582,-11.679,5.678)
C5: (-9.116,-10.912,6.643)
O3': (-5.975,-11.859,1.638)
OP1: (-3.376,-13.289,6.567)
OP2: (-5.217,-11.992,7.790)
C4: (-10.523,-10.657,6.581)
O5': (-5.457,-12.653,5.374)
C3': (-6.765,-12.078,2.796)
C1': (-8.781,-13.014,3.599)
O4': (-7.693,-13.753,4.127)
C5': (-5.306,-13.550,4.281)
P: (-4.818,-13.013,6.787)
O2: (-11.401,-12.421,3.728)
C4': (-6.495,-13.459,3.365)
C2': (-8.242,-12.174,2.437)
O2': (-8.475,-12.811,1.197)
N1: (-9.359,-12.191,4.675)
N3: (-11.288,-11.164,5.610)
N4: (-11.115,-9.891,7.507)
C6: (-8.582,-11.679,5.678)
C5: (-9.116,-10.912,6.643)
O3': (-5.975,-11.859,1.638)
Image (generated by PyMOL):