Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9112:964
Extra
PDB:
ATOM 1 O3' U A 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 2 P C A 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 3 OP1 C A 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 4 OP2 C A 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 5 O5' C A 112 51.710 32.652 114.338 1.00 53.09 O
ATOM 6 C5' C A 112 52.672 33.143 113.406 1.00 52.60 C
ATOM 7 C4' C A 112 53.940 32.336 113.485 1.00 52.77 C
ATOM 8 O4' C A 112 54.741 32.771 114.619 1.00 53.86 O
ATOM 9 C3' C A 112 53.752 30.831 113.643 1.00 52.31 C
ATOM 10 O3' C A 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 11 C2' C A 112 54.101 30.602 115.109 1.00 52.92 C
ATOM 12 O2' C A 112 54.611 29.308 115.349 1.00 54.83 O
ATOM 13 C1' C A 112 55.205 31.634 115.304 1.00 53.38 C
ATOM 14 N1 C A 112 55.551 31.999 116.694 1.00 54.10 N
ATOM 15 C2 C A 112 56.841 32.509 116.952 1.00 54.54 C
ATOM 16 O2 C A 112 57.626 32.686 116.001 1.00 54.18 O
ATOM 17 N3 C A 112 57.197 32.797 118.230 1.00 53.33 N
ATOM 18 C4 C A 112 56.328 32.605 119.226 1.00 52.05 C
ATOM 19 N4 C A 112 56.732 32.885 120.464 1.00 50.12 N
ATOM 20 C5 C A 112 55.005 32.114 118.992 1.00 52.69 C
ATOM 21 C6 C A 112 54.660 31.831 117.723 1.00 53.56 C
ATOM 22 P G A 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 23 OP1 G A 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 24 OP2 G A 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 25 O5' G A 113 53.458 30.477 110.701 1.00 54.55 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
ATOM 2 P C A 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 3 OP1 C A 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 4 OP2 C A 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 5 O5' C A 112 51.710 32.652 114.338 1.00 53.09 O
ATOM 6 C5' C A 112 52.672 33.143 113.406 1.00 52.60 C
ATOM 7 C4' C A 112 53.940 32.336 113.485 1.00 52.77 C
ATOM 8 O4' C A 112 54.741 32.771 114.619 1.00 53.86 O
ATOM 9 C3' C A 112 53.752 30.831 113.643 1.00 52.31 C
ATOM 10 O3' C A 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 11 C2' C A 112 54.101 30.602 115.109 1.00 52.92 C
ATOM 12 O2' C A 112 54.611 29.308 115.349 1.00 54.83 O
ATOM 13 C1' C A 112 55.205 31.634 115.304 1.00 53.38 C
ATOM 14 N1 C A 112 55.551 31.999 116.694 1.00 54.10 N
ATOM 15 C2 C A 112 56.841 32.509 116.952 1.00 54.54 C
ATOM 16 O2 C A 112 57.626 32.686 116.001 1.00 54.18 O
ATOM 17 N3 C A 112 57.197 32.797 118.230 1.00 53.33 N
ATOM 18 C4 C A 112 56.328 32.605 119.226 1.00 52.05 C
ATOM 19 N4 C A 112 56.732 32.885 120.464 1.00 50.12 N
ATOM 20 C5 C A 112 55.005 32.114 118.992 1.00 52.69 C
ATOM 21 C6 C A 112 54.660 31.831 117.723 1.00 53.56 C
ATOM 22 P G A 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 23 OP1 G A 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 24 OP2 G A 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 25 O5' G A 113 53.458 30.477 110.701 1.00 54.55 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
Atoms:
C2: (56.841,32.509,116.952)
OP1: (50.094,31.682,112.704)
OP2: (49.411,32.151,115.132)
C4: (56.328,32.605,119.226)
O5': (51.710,32.652,114.338)
C3': (53.752,30.831,113.643)
C1': (55.205,31.634,115.304)
O4': (54.741,32.771,114.619)
C5': (52.672,33.143,113.406)
P: (50.182,32.524,113.921)
O2: (57.626,32.686,116.001)
C4': (53.940,32.336,113.485)
C2': (54.101,30.602,115.109)
O2': (54.611,29.308,115.349)
N1: (55.551,31.999,116.694)
N3: (57.197,32.797,118.230)
N4: (56.732,32.885,120.464)
C6: (54.660,31.831,117.723)
C5: (55.005,32.114,118.992)
O3': (54.700,30.159,112.840)
OP1: (50.094,31.682,112.704)
OP2: (49.411,32.151,115.132)
C4: (56.328,32.605,119.226)
O5': (51.710,32.652,114.338)
C3': (53.752,30.831,113.643)
C1': (55.205,31.634,115.304)
O4': (54.741,32.771,114.619)
C5': (52.672,33.143,113.406)
P: (50.182,32.524,113.921)
O2: (57.626,32.686,116.001)
C4': (53.940,32.336,113.485)
C2': (54.101,30.602,115.109)
O2': (54.611,29.308,115.349)
N1: (55.551,31.999,116.694)
N3: (57.197,32.797,118.230)
N4: (56.732,32.885,120.464)
C6: (54.660,31.831,117.723)
C5: (55.005,32.114,118.992)
O3': (54.700,30.159,112.840)
OP1: (51.908,31.786,125.979)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
Image (generated by PyMOL):