Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:969:970
Extra
PDB:
ATOM 1 O3' U A 68 55.320 45.228 111.876 1.00 71.91 O
ATOM 2 P U A 69 53.925 45.996 112.080 1.00 72.05 P
ATOM 3 OP1 U A 69 53.836 47.004 110.992 1.00 74.20 O
ATOM 4 OP2 U A 69 53.829 46.438 113.496 1.00 71.69 O
ATOM 5 O5' U A 69 52.825 44.876 111.803 1.00 71.38 O
ATOM 6 C5' U A 69 52.525 44.455 110.460 1.00 73.23 C
ATOM 7 C4' U A 69 51.219 43.689 110.416 1.00 75.31 C
ATOM 8 O4' U A 69 51.367 42.419 111.102 1.00 75.50 O
ATOM 9 C3' U A 69 50.016 44.334 111.089 1.00 75.97 C
ATOM 10 O3' U A 69 49.398 45.324 110.265 1.00 76.66 O
ATOM 11 C2' U A 69 49.111 43.132 111.329 1.00 75.53 C
ATOM 12 O2' U A 69 48.432 42.721 110.156 1.00 76.12 O
ATOM 13 C1' U A 69 50.134 42.056 111.704 1.00 74.65 C
ATOM 14 N1 U A 69 50.347 41.896 113.154 1.00 74.29 N
ATOM 15 C2 U A 69 49.568 40.964 113.823 1.00 74.29 C
ATOM 16 O2 U A 69 48.712 40.290 113.268 1.00 74.14 O
ATOM 17 N3 U A 69 49.828 40.849 115.168 1.00 74.12 N
ATOM 18 C4 U A 69 50.771 41.547 115.898 1.00 74.15 C
ATOM 19 O4 U A 69 50.898 41.317 117.102 1.00 73.30 O
ATOM 20 C5 U A 69 51.526 42.497 115.141 1.00 73.56 C
ATOM 21 C6 U A 69 51.294 42.637 113.831 1.00 74.41 C
ATOM 22 P C A 70 48.631 46.569 110.944 1.00 78.49 P
ATOM 23 OP1 C A 70 48.252 47.493 109.841 1.00 78.08 O
ATOM 24 OP2 C A 70 49.435 47.083 112.089 1.00 77.10 O
ATOM 25 O5' C A 70 47.297 45.925 111.538 1.00 80.80 O
TER
ATOM 1 O3' U B 69 49.398 45.324 110.265 1.00 76.66 O
ATOM 2 P C B 70 48.631 46.569 110.944 1.00 78.49 P
ATOM 3 OP1 C B 70 48.252 47.493 109.841 1.00 78.08 O
ATOM 4 OP2 C B 70 49.435 47.083 112.089 1.00 77.10 O
ATOM 5 O5' C B 70 47.297 45.925 111.538 1.00 80.80 O
ATOM 6 C5' C B 70 46.310 45.334 110.669 1.00 82.58 C
ATOM 7 C4' C B 70 45.388 44.425 111.452 1.00 84.90 C
ATOM 8 O4' C B 70 46.177 43.396 112.109 1.00 84.10 O
ATOM 9 C3' C B 70 44.596 45.052 112.593 1.00 86.71 C
ATOM 10 O3' C B 70 43.415 45.716 112.136 1.00 89.37 O
ATOM 11 C2' C B 70 44.255 43.836 113.446 1.00 85.94 C
ATOM 12 O2' C B 70 43.157 43.099 112.941 1.00 86.91 O
ATOM 13 C1' C B 70 45.533 43.003 113.313 1.00 83.60 C
ATOM 14 N1 C B 70 46.462 43.182 114.445 1.00 81.15 N
ATOM 15 C2 C B 70 46.296 42.379 115.584 1.00 79.66 C
ATOM 16 O2 C B 70 45.388 41.533 115.598 1.00 78.65 O
ATOM 17 N3 C B 70 47.126 42.545 116.639 1.00 78.35 N
ATOM 18 C4 C B 70 48.089 43.467 116.591 1.00 78.27 C
ATOM 19 N4 C B 70 48.873 43.611 117.665 1.00 76.14 N
ATOM 20 C5 C B 70 48.290 44.289 115.442 1.00 79.26 C
ATOM 21 C6 C B 70 47.463 44.114 114.402 1.00 80.37 C
ATOM 22 P C B 71 42.709 46.829 113.064 1.00 92.37 P
ATOM 23 OP1 C B 71 41.534 47.327 112.303 1.00 92.31 O
ATOM 24 OP2 C B 71 43.738 47.794 113.535 1.00 92.12 O
ATOM 25 O5' C B 71 42.185 46.017 114.336 1.00 93.68 O
TER
ATOM 2 P U A 69 53.925 45.996 112.080 1.00 72.05 P
ATOM 3 OP1 U A 69 53.836 47.004 110.992 1.00 74.20 O
ATOM 4 OP2 U A 69 53.829 46.438 113.496 1.00 71.69 O
ATOM 5 O5' U A 69 52.825 44.876 111.803 1.00 71.38 O
ATOM 6 C5' U A 69 52.525 44.455 110.460 1.00 73.23 C
ATOM 7 C4' U A 69 51.219 43.689 110.416 1.00 75.31 C
ATOM 8 O4' U A 69 51.367 42.419 111.102 1.00 75.50 O
ATOM 9 C3' U A 69 50.016 44.334 111.089 1.00 75.97 C
ATOM 10 O3' U A 69 49.398 45.324 110.265 1.00 76.66 O
ATOM 11 C2' U A 69 49.111 43.132 111.329 1.00 75.53 C
ATOM 12 O2' U A 69 48.432 42.721 110.156 1.00 76.12 O
ATOM 13 C1' U A 69 50.134 42.056 111.704 1.00 74.65 C
ATOM 14 N1 U A 69 50.347 41.896 113.154 1.00 74.29 N
ATOM 15 C2 U A 69 49.568 40.964 113.823 1.00 74.29 C
ATOM 16 O2 U A 69 48.712 40.290 113.268 1.00 74.14 O
ATOM 17 N3 U A 69 49.828 40.849 115.168 1.00 74.12 N
ATOM 18 C4 U A 69 50.771 41.547 115.898 1.00 74.15 C
ATOM 19 O4 U A 69 50.898 41.317 117.102 1.00 73.30 O
ATOM 20 C5 U A 69 51.526 42.497 115.141 1.00 73.56 C
ATOM 21 C6 U A 69 51.294 42.637 113.831 1.00 74.41 C
ATOM 22 P C A 70 48.631 46.569 110.944 1.00 78.49 P
ATOM 23 OP1 C A 70 48.252 47.493 109.841 1.00 78.08 O
ATOM 24 OP2 C A 70 49.435 47.083 112.089 1.00 77.10 O
ATOM 25 O5' C A 70 47.297 45.925 111.538 1.00 80.80 O
TER
ATOM 1 O3' U B 69 49.398 45.324 110.265 1.00 76.66 O
ATOM 2 P C B 70 48.631 46.569 110.944 1.00 78.49 P
ATOM 3 OP1 C B 70 48.252 47.493 109.841 1.00 78.08 O
ATOM 4 OP2 C B 70 49.435 47.083 112.089 1.00 77.10 O
ATOM 5 O5' C B 70 47.297 45.925 111.538 1.00 80.80 O
ATOM 6 C5' C B 70 46.310 45.334 110.669 1.00 82.58 C
ATOM 7 C4' C B 70 45.388 44.425 111.452 1.00 84.90 C
ATOM 8 O4' C B 70 46.177 43.396 112.109 1.00 84.10 O
ATOM 9 C3' C B 70 44.596 45.052 112.593 1.00 86.71 C
ATOM 10 O3' C B 70 43.415 45.716 112.136 1.00 89.37 O
ATOM 11 C2' C B 70 44.255 43.836 113.446 1.00 85.94 C
ATOM 12 O2' C B 70 43.157 43.099 112.941 1.00 86.91 O
ATOM 13 C1' C B 70 45.533 43.003 113.313 1.00 83.60 C
ATOM 14 N1 C B 70 46.462 43.182 114.445 1.00 81.15 N
ATOM 15 C2 C B 70 46.296 42.379 115.584 1.00 79.66 C
ATOM 16 O2 C B 70 45.388 41.533 115.598 1.00 78.65 O
ATOM 17 N3 C B 70 47.126 42.545 116.639 1.00 78.35 N
ATOM 18 C4 C B 70 48.089 43.467 116.591 1.00 78.27 C
ATOM 19 N4 C B 70 48.873 43.611 117.665 1.00 76.14 N
ATOM 20 C5 C B 70 48.290 44.289 115.442 1.00 79.26 C
ATOM 21 C6 C B 70 47.463 44.114 114.402 1.00 80.37 C
ATOM 22 P C B 71 42.709 46.829 113.064 1.00 92.37 P
ATOM 23 OP1 C B 71 41.534 47.327 112.303 1.00 92.31 O
ATOM 24 OP2 C B 71 43.738 47.794 113.535 1.00 92.12 O
ATOM 25 O5' C B 71 42.185 46.017 114.336 1.00 93.68 O
TER
Atoms:
C4: (50.771,41.547,115.898)
N3: (49.828,40.849,115.168)
OP1: (53.836,47.004,110.992)
OP2: (53.829,46.438,113.496)
C2: (49.568,40.964,113.823)
C1': (50.134,42.056,111.704)
C3': (50.016,44.334,111.089)
O5': (52.825,44.876,111.803)
O4': (51.367,42.419,111.102)
C5': (52.525,44.455,110.460)
P: (53.925,45.996,112.080)
C4': (51.219,43.689,110.416)
C2': (49.111,43.132,111.329)
O2': (48.432,42.721,110.156)
N1: (50.347,41.896,113.154)
O4: (50.898,41.317,117.102)
O2: (48.712,40.290,113.268)
C6: (51.294,42.637,113.831)
C5: (51.526,42.497,115.141)
O3': (49.398,45.324,110.265)
N3: (49.828,40.849,115.168)
OP1: (53.836,47.004,110.992)
OP2: (53.829,46.438,113.496)
C2: (49.568,40.964,113.823)
C1': (50.134,42.056,111.704)
C3': (50.016,44.334,111.089)
O5': (52.825,44.876,111.803)
O4': (51.367,42.419,111.102)
C5': (52.525,44.455,110.460)
P: (53.925,45.996,112.080)
C4': (51.219,43.689,110.416)
C2': (49.111,43.132,111.329)
O2': (48.432,42.721,110.156)
N1: (50.347,41.896,113.154)
O4: (50.898,41.317,117.102)
O2: (48.712,40.290,113.268)
C6: (51.294,42.637,113.831)
C5: (51.526,42.497,115.141)
O3': (49.398,45.324,110.265)
C2: (46.296,42.379,115.584)
OP1: (48.252,47.493,109.841)
OP2: (49.435,47.083,112.089)
C4: (48.089,43.467,116.591)
O5': (47.297,45.925,111.538)
C3': (44.596,45.052,112.593)
C1': (45.533,43.003,113.313)
O4': (46.177,43.396,112.109)
C5': (46.310,45.334,110.669)
P: (48.631,46.569,110.944)
O2: (45.388,41.533,115.598)
C4': (45.388,44.425,111.452)
C2': (44.255,43.836,113.446)
O2': (43.157,43.099,112.941)
N1: (46.462,43.182,114.445)
N3: (47.126,42.545,116.639)
N4: (48.873,43.611,117.665)
C6: (47.463,44.114,114.402)
C5: (48.290,44.289,115.442)
O3': (43.415,45.716,112.136)
OP1: (48.252,47.493,109.841)
OP2: (49.435,47.083,112.089)
C4: (48.089,43.467,116.591)
O5': (47.297,45.925,111.538)
C3': (44.596,45.052,112.593)
C1': (45.533,43.003,113.313)
O4': (46.177,43.396,112.109)
C5': (46.310,45.334,110.669)
P: (48.631,46.569,110.944)
O2: (45.388,41.533,115.598)
C4': (45.388,44.425,111.452)
C2': (44.255,43.836,113.446)
O2': (43.157,43.099,112.941)
N1: (46.462,43.182,114.445)
N3: (47.126,42.545,116.639)
N4: (48.873,43.611,117.665)
C6: (47.463,44.114,114.402)
C5: (48.290,44.289,115.442)
O3': (43.415,45.716,112.136)
Image (generated by PyMOL):