Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A583:A584
Extra
PDB:
ATOM 1 O3' C A 582 -0.988 107.623 91.425 1.00 40.96 O
ATOM 2 P U A 583 -2.116 108.670 90.977 1.00 42.15 P
ATOM 3 OP1 U A 583 -1.564 109.525 89.895 1.00 42.43 O
ATOM 4 OP2 U A 583 -2.654 109.306 92.201 1.00 40.36 O
ATOM 5 O5' U A 583 -3.247 107.738 90.359 1.00 41.56 O
ATOM 6 C5' U A 583 -3.031 107.035 89.121 1.00 43.35 C
ATOM 7 C4' U A 583 -4.286 106.295 88.714 1.00 45.54 C
ATOM 8 O4' U A 583 -4.518 105.173 89.610 1.00 46.84 O
ATOM 9 C3' U A 583 -5.576 107.095 88.786 1.00 46.01 C
ATOM 10 O3' U A 583 -5.774 107.922 87.656 1.00 47.70 O
ATOM 11 C2' U A 583 -6.618 105.998 88.887 1.00 45.94 C
ATOM 12 O2' U A 583 -6.873 105.385 87.640 1.00 45.50 O
ATOM 13 C1' U A 583 -5.913 105.022 89.831 1.00 47.26 C
ATOM 14 N1 U A 583 -6.204 105.363 91.236 1.00 49.28 N
ATOM 15 C2 U A 583 -7.378 104.883 91.790 1.00 49.88 C
ATOM 16 O2 U A 583 -8.152 104.158 91.185 1.00 50.76 O
ATOM 17 N3 U A 583 -7.613 105.285 93.082 1.00 50.19 N
ATOM 18 C4 U A 583 -6.815 106.089 93.861 1.00 50.06 C
ATOM 19 O4 U A 583 -7.156 106.346 95.016 1.00 51.10 O
ATOM 20 C5 U A 583 -5.617 106.527 93.228 1.00 50.76 C
ATOM 21 C6 U A 583 -5.356 106.156 91.974 1.00 49.73 C
ATOM 22 P C A 584 -6.668 109.250 87.795 1.00 49.74 P
ATOM 23 OP1 C A 584 -6.479 110.049 86.559 1.00 50.24 O
ATOM 24 OP2 C A 584 -6.403 109.874 89.115 1.00 47.49 O
ATOM 25 O5' C A 584 -8.161 108.695 87.790 1.00 51.87 O
TER
ATOM 1 O3' U B 583 -5.774 107.922 87.656 1.00 47.70 O
ATOM 2 P C B 584 -6.668 109.250 87.795 1.00 49.74 P
ATOM 3 OP1 C B 584 -6.479 110.049 86.559 1.00 50.24 O
ATOM 4 OP2 C B 584 -6.403 109.874 89.115 1.00 47.49 O
ATOM 5 O5' C B 584 -8.161 108.695 87.790 1.00 51.87 O
ATOM 6 C5' C B 584 -8.613 107.817 86.743 1.00 53.47 C
ATOM 7 C4' C B 584 -9.928 107.188 87.123 1.00 54.99 C
ATOM 8 O4' C B 584 -9.740 106.369 88.304 1.00 56.04 O
ATOM 9 C3' C B 584 -11.027 108.157 87.524 1.00 56.11 C
ATOM 10 O3' C B 584 -11.716 108.663 86.393 1.00 57.79 O
ATOM 11 C2' C B 584 -11.933 107.273 88.359 1.00 56.30 C
ATOM 12 O2' C B 584 -12.705 106.427 87.529 1.00 58.30 O
ATOM 13 C1' C B 584 -10.904 106.427 89.113 1.00 55.84 C
ATOM 14 N1 C B 584 -10.546 106.992 90.430 1.00 55.12 N
ATOM 15 C2 C B 584 -11.400 106.759 91.520 1.00 56.11 C
ATOM 16 O2 C B 584 -12.408 106.055 91.356 1.00 58.15 O
ATOM 17 N3 C B 584 -11.105 107.301 92.722 1.00 55.27 N
ATOM 18 C4 C B 584 -10.006 108.044 92.866 1.00 54.70 C
ATOM 19 N4 C B 584 -9.768 108.577 94.063 1.00 53.28 N
ATOM 20 C5 C B 584 -9.105 108.279 91.783 1.00 55.23 C
ATOM 21 C6 C B 584 -9.413 107.739 90.594 1.00 54.94 C
ATOM 22 P A B 585 -12.560 110.024 86.524 1.00 60.19 P
ATOM 23 OP1 A B 585 -13.005 110.377 85.155 1.00 60.76 O
ATOM 24 OP2 A B 585 -11.789 111.008 87.323 1.00 59.79 O
ATOM 25 O5' A B 585 -13.841 109.601 87.364 1.00 61.17 O
TER
ATOM 2 P U A 583 -2.116 108.670 90.977 1.00 42.15 P
ATOM 3 OP1 U A 583 -1.564 109.525 89.895 1.00 42.43 O
ATOM 4 OP2 U A 583 -2.654 109.306 92.201 1.00 40.36 O
ATOM 5 O5' U A 583 -3.247 107.738 90.359 1.00 41.56 O
ATOM 6 C5' U A 583 -3.031 107.035 89.121 1.00 43.35 C
ATOM 7 C4' U A 583 -4.286 106.295 88.714 1.00 45.54 C
ATOM 8 O4' U A 583 -4.518 105.173 89.610 1.00 46.84 O
ATOM 9 C3' U A 583 -5.576 107.095 88.786 1.00 46.01 C
ATOM 10 O3' U A 583 -5.774 107.922 87.656 1.00 47.70 O
ATOM 11 C2' U A 583 -6.618 105.998 88.887 1.00 45.94 C
ATOM 12 O2' U A 583 -6.873 105.385 87.640 1.00 45.50 O
ATOM 13 C1' U A 583 -5.913 105.022 89.831 1.00 47.26 C
ATOM 14 N1 U A 583 -6.204 105.363 91.236 1.00 49.28 N
ATOM 15 C2 U A 583 -7.378 104.883 91.790 1.00 49.88 C
ATOM 16 O2 U A 583 -8.152 104.158 91.185 1.00 50.76 O
ATOM 17 N3 U A 583 -7.613 105.285 93.082 1.00 50.19 N
ATOM 18 C4 U A 583 -6.815 106.089 93.861 1.00 50.06 C
ATOM 19 O4 U A 583 -7.156 106.346 95.016 1.00 51.10 O
ATOM 20 C5 U A 583 -5.617 106.527 93.228 1.00 50.76 C
ATOM 21 C6 U A 583 -5.356 106.156 91.974 1.00 49.73 C
ATOM 22 P C A 584 -6.668 109.250 87.795 1.00 49.74 P
ATOM 23 OP1 C A 584 -6.479 110.049 86.559 1.00 50.24 O
ATOM 24 OP2 C A 584 -6.403 109.874 89.115 1.00 47.49 O
ATOM 25 O5' C A 584 -8.161 108.695 87.790 1.00 51.87 O
TER
ATOM 1 O3' U B 583 -5.774 107.922 87.656 1.00 47.70 O
ATOM 2 P C B 584 -6.668 109.250 87.795 1.00 49.74 P
ATOM 3 OP1 C B 584 -6.479 110.049 86.559 1.00 50.24 O
ATOM 4 OP2 C B 584 -6.403 109.874 89.115 1.00 47.49 O
ATOM 5 O5' C B 584 -8.161 108.695 87.790 1.00 51.87 O
ATOM 6 C5' C B 584 -8.613 107.817 86.743 1.00 53.47 C
ATOM 7 C4' C B 584 -9.928 107.188 87.123 1.00 54.99 C
ATOM 8 O4' C B 584 -9.740 106.369 88.304 1.00 56.04 O
ATOM 9 C3' C B 584 -11.027 108.157 87.524 1.00 56.11 C
ATOM 10 O3' C B 584 -11.716 108.663 86.393 1.00 57.79 O
ATOM 11 C2' C B 584 -11.933 107.273 88.359 1.00 56.30 C
ATOM 12 O2' C B 584 -12.705 106.427 87.529 1.00 58.30 O
ATOM 13 C1' C B 584 -10.904 106.427 89.113 1.00 55.84 C
ATOM 14 N1 C B 584 -10.546 106.992 90.430 1.00 55.12 N
ATOM 15 C2 C B 584 -11.400 106.759 91.520 1.00 56.11 C
ATOM 16 O2 C B 584 -12.408 106.055 91.356 1.00 58.15 O
ATOM 17 N3 C B 584 -11.105 107.301 92.722 1.00 55.27 N
ATOM 18 C4 C B 584 -10.006 108.044 92.866 1.00 54.70 C
ATOM 19 N4 C B 584 -9.768 108.577 94.063 1.00 53.28 N
ATOM 20 C5 C B 584 -9.105 108.279 91.783 1.00 55.23 C
ATOM 21 C6 C B 584 -9.413 107.739 90.594 1.00 54.94 C
ATOM 22 P A B 585 -12.560 110.024 86.524 1.00 60.19 P
ATOM 23 OP1 A B 585 -13.005 110.377 85.155 1.00 60.76 O
ATOM 24 OP2 A B 585 -11.789 111.008 87.323 1.00 59.79 O
ATOM 25 O5' A B 585 -13.841 109.601 87.364 1.00 61.17 O
TER
Atoms:
C4: (-6.815,106.089,93.861)
N3: (-7.613,105.285,93.082)
OP1: (-1.564,109.525,89.895)
OP2: (-2.654,109.306,92.201)
C2: (-7.378,104.883,91.790)
C1': (-5.913,105.022,89.831)
C3': (-5.576,107.095,88.786)
O5': (-3.247,107.738,90.359)
O4': (-4.518,105.173,89.610)
C5': (-3.031,107.035,89.121)
P: (-2.116,108.670,90.977)
C4': (-4.286,106.295,88.714)
C2': (-6.618,105.998,88.887)
O2': (-6.873,105.385,87.640)
N1: (-6.204,105.363,91.236)
O4: (-7.156,106.346,95.016)
O2: (-8.152,104.158,91.185)
C6: (-5.356,106.156,91.974)
C5: (-5.617,106.527,93.228)
O3': (-5.774,107.922,87.656)
N3: (-7.613,105.285,93.082)
OP1: (-1.564,109.525,89.895)
OP2: (-2.654,109.306,92.201)
C2: (-7.378,104.883,91.790)
C1': (-5.913,105.022,89.831)
C3': (-5.576,107.095,88.786)
O5': (-3.247,107.738,90.359)
O4': (-4.518,105.173,89.610)
C5': (-3.031,107.035,89.121)
P: (-2.116,108.670,90.977)
C4': (-4.286,106.295,88.714)
C2': (-6.618,105.998,88.887)
O2': (-6.873,105.385,87.640)
N1: (-6.204,105.363,91.236)
O4: (-7.156,106.346,95.016)
O2: (-8.152,104.158,91.185)
C6: (-5.356,106.156,91.974)
C5: (-5.617,106.527,93.228)
O3': (-5.774,107.922,87.656)
C2: (-11.400,106.759,91.520)
OP1: (-6.479,110.049,86.559)
OP2: (-6.403,109.874,89.115)
C4: (-10.006,108.044,92.866)
O5': (-8.161,108.695,87.790)
C3': (-11.027,108.157,87.524)
C1': (-10.904,106.427,89.113)
O4': (-9.740,106.369,88.304)
C5': (-8.613,107.817,86.743)
P: (-6.668,109.250,87.795)
O2: (-12.408,106.055,91.356)
C4': (-9.928,107.188,87.123)
C2': (-11.933,107.273,88.359)
O2': (-12.705,106.427,87.529)
N1: (-10.546,106.992,90.430)
N3: (-11.105,107.301,92.722)
N4: (-9.768,108.577,94.063)
C6: (-9.413,107.739,90.594)
C5: (-9.105,108.279,91.783)
O3': (-11.716,108.663,86.393)
OP1: (-6.479,110.049,86.559)
OP2: (-6.403,109.874,89.115)
C4: (-10.006,108.044,92.866)
O5': (-8.161,108.695,87.790)
C3': (-11.027,108.157,87.524)
C1': (-10.904,106.427,89.113)
O4': (-9.740,106.369,88.304)
C5': (-8.613,107.817,86.743)
P: (-6.668,109.250,87.795)
O2: (-12.408,106.055,91.356)
C4': (-9.928,107.188,87.123)
C2': (-11.933,107.273,88.359)
O2': (-12.705,106.427,87.529)
N1: (-10.546,106.992,90.430)
N3: (-11.105,107.301,92.722)
N4: (-9.768,108.577,94.063)
C6: (-9.413,107.739,90.594)
C5: (-9.105,108.279,91.783)
O3': (-11.716,108.663,86.393)
Image (generated by PyMOL):