ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUB:A10:A1373

Extra

PDB:
ATOM 1 O3' U A 9 179.982 110.551 -8.838 1.00 39.68 O
ATOM 2 P G A 10 181.101 110.342 -7.703 1.00 40.56 P
ATOM 3 OP1 G A 10 182.394 110.180 -8.411 1.00 42.81 O
ATOM 4 OP2 G A 10 180.651 109.294 -6.756 1.00 39.61 O
ATOM 5 O5' G A 10 181.154 111.736 -6.979 1.00 39.09 O
ATOM 6 C5' G A 10 181.778 111.862 -5.700 1.00 39.74 C
ATOM 7 C4' G A 10 181.765 113.300 -5.262 1.00 39.95 C
ATOM 8 O4' G A 10 182.599 114.076 -6.157 1.00 41.09 O
ATOM 9 C3' G A 10 180.408 113.977 -5.310 1.00 40.38 C
ATOM 10 O3' G A 10 179.678 113.726 -4.121 1.00 40.39 O
ATOM 11 C2' G A 10 180.788 115.440 -5.472 1.00 40.26 C
ATOM 12 O2' G A 10 181.199 115.972 -4.230 1.00 40.10 O
ATOM 13 C1' G A 10 182.010 115.339 -6.389 1.00 39.91 C
ATOM 14 N9 G A 10 181.686 115.416 -7.812 1.00 39.17 N
ATOM 15 C8 G A 10 181.884 114.437 -8.763 1.00 38.92 C
ATOM 16 N7 G A 10 181.474 114.788 -9.954 1.00 38.46 N
ATOM 17 C5 G A 10 180.979 116.071 -9.779 1.00 37.38 C
ATOM 18 C6 G A 10 180.387 116.951 -10.706 1.00 37.80 C
ATOM 19 O6 G A 10 180.157 116.762 -11.902 1.00 38.51 O
ATOM 20 N1 G A 10 180.031 118.156 -10.112 1.00 38.21 N
ATOM 21 C2 G A 10 180.203 118.463 -8.783 1.00 38.63 C
ATOM 22 N2 G A 10 179.775 119.669 -8.390 1.00 39.58 N
ATOM 23 N3 G A 10 180.747 117.644 -7.903 1.00 37.66 N
ATOM 24 C4 G A 10 181.110 116.476 -8.465 1.00 37.63 C
ATOM 25 P A A 11 178.158 113.209 -4.214 1.00 39.67 P
ATOM 26 OP1 A A 11 177.781 112.829 -2.824 1.00 39.46 O
ATOM 27 OP2 A A 11 178.053 112.211 -5.309 1.00 38.32 O
ATOM 28 O5' A A 11 177.354 114.510 -4.615 1.00 38.16 O
TER

ATOM 1 O3' C B1372 187.638 108.445 -12.870 1.00 38.78 O
ATOM 2 P A B1373 186.659 108.154 -11.632 1.00 41.79 P
ATOM 3 OP1 A B1373 187.362 107.139 -10.785 1.00 39.36 O
ATOM 4 OP2 A B1373 185.273 107.879 -12.142 1.00 42.86 O
ATOM 5 O5' A B1373 186.642 109.530 -10.854 1.00 41.52 O
ATOM 6 C5' A B1373 187.826 110.042 -10.239 1.00 41.43 C
ATOM 7 C4' A B1373 187.508 111.297 -9.474 1.00 41.69 C
ATOM 8 O4' A B1373 187.055 112.321 -10.402 1.00 40.48 O
ATOM 9 C3' A B1373 186.425 111.156 -8.410 1.00 42.37 C
ATOM 10 O3' A B1373 186.782 111.967 -7.299 1.00 45.86 O
ATOM 11 C2' A B1373 185.197 111.739 -9.108 1.00 41.36 C
ATOM 12 O2' A B1373 184.272 112.321 -8.226 1.00 43.88 O
ATOM 13 C1' A B1373 185.823 112.835 -9.960 1.00 39.50 C
ATOM 14 N9 A B1373 185.051 113.289 -11.116 1.00 35.13 N
ATOM 15 C8 A B1373 184.653 112.601 -12.234 1.00 34.61 C
ATOM 16 N7 A B1373 184.018 113.345 -13.112 1.00 32.28 N
ATOM 17 C5 A B1373 183.990 114.599 -12.526 1.00 31.67 C
ATOM 18 C6 A B1373 183.491 115.834 -12.962 1.00 33.12 C
ATOM 19 N6 A B1373 182.923 116.024 -14.152 1.00 34.24 N
ATOM 20 N1 A B1373 183.616 116.890 -12.134 1.00 31.23 N
ATOM 21 C2 A B1373 184.223 116.710 -10.960 1.00 32.03 C
ATOM 22 N3 A B1373 184.752 115.605 -10.445 1.00 31.72 N
ATOM 23 C4 A B1373 184.601 114.574 -11.289 1.00 32.74 C
ATOM 24 P C B1374 187.127 111.290 -5.881 1.00 50.22 P
ATOM 25 OP1 C B1374 186.172 110.182 -5.626 1.00 50.69 O
ATOM 26 OP2 C B1374 187.258 112.392 -4.908 1.00 51.56 O
ATOM 27 O5' C B1374 188.545 110.604 -6.073 1.00 53.22 O
TER

Atoms:
OP1: (182.394,110.180,-8.411)
OP2: (180.651,109.294,-6.756)
C3': (180.408,113.977,-5.310)
C1': (182.010,115.339,-6.389)
C5': (181.778,111.862,-5.700)
O6: (180.157,116.762,-11.902)
O4': (182.599,114.076,-6.157)
C8: (181.884,114.437,-8.763)
C2: (180.203,118.463,-8.783)
C6: (180.387,116.951,-10.706)
C5: (180.979,116.071,-9.779)
C4: (181.110,116.476,-8.465)
P: (181.101,110.342,-7.703)
C4': (181.765,113.300,-5.262)
C2': (180.788,115.440,-5.472)
O2': (181.199,115.972,-4.230)
N1: (180.031,118.156,-10.112)
N2: (179.775,119.669,-8.390)
N3: (180.747,117.644,-7.903)
N7: (181.474,114.788,-9.954)
N9: (181.686,115.416,-7.812)
O5': (181.154,111.736,-6.979)
O3': (179.678,113.726,-4.121)
OP1: (187.362,107.139,-10.785)
OP2: (185.273,107.879,-12.142)
C3': (186.425,111.156,-8.410)
C1': (185.823,112.835,-9.960)
C5': (187.826,110.042,-10.239)
O4': (187.055,112.321,-10.402)
C8: (184.653,112.601,-12.234)
O2': (184.272,112.321,-8.226)
C6: (183.491,115.834,-12.962)
C5: (183.990,114.599,-12.526)
C4: (184.601,114.574,-11.289)
P: (186.659,108.154,-11.632)
C4': (187.508,111.297,-9.474)
C2': (185.197,111.739,-9.108)
C2: (184.223,116.710,-10.960)
N1: (183.616,116.890,-12.134)
N3: (184.752,115.605,-10.445)
N6: (182.923,116.024,-14.152)
N7: (184.018,113.345,-13.112)
N9: (185.051,113.289,-11.116)
O5': (186.642,109.530,-10.854)
O3': (186.782,111.967,-7.299)
Image (generated by PyMOL):
PyMOL image
show in jmol