Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01520:01518
Extra
PDB:
ATOM 1 P C A1520 84.132 210.608 105.333 1.00 91.98 P
ATOM 2 OP1 C A1520 84.904 211.864 105.501 1.00 93.77 O
ATOM 3 OP2 C A1520 83.601 210.250 103.991 1.00 92.35 O
ATOM 4 O5' C A1520 85.064 209.424 105.854 1.00 91.16 O
ATOM 5 C5' C A1520 86.462 209.389 105.486 1.00 90.51 C
ATOM 6 C4' C A1520 86.925 207.968 105.256 1.00 89.72 C
ATOM 7 O4' C A1520 85.811 207.048 105.331 1.00 90.78 O
ATOM 8 C3' C A1520 87.533 207.720 103.887 1.00 88.52 C
ATOM 9 O3' C A1520 88.908 208.083 103.906 1.00 88.68 O
ATOM 10 C2' C A1520 87.360 206.217 103.707 1.00 87.86 C
ATOM 11 O2' C A1520 88.395 205.486 104.325 1.00 85.42 O
ATOM 12 C1' C A1520 86.049 205.956 104.460 1.00 89.37 C
ATOM 13 N1 C A1520 84.830 205.701 103.661 1.00 89.58 N
ATOM 14 C2 C A1520 84.784 204.571 102.830 1.00 89.77 C
ATOM 15 O2 C A1520 85.785 203.835 102.751 1.00 89.96 O
ATOM 16 N3 C A1520 83.650 204.309 102.138 1.00 88.95 N
ATOM 17 C4 C A1520 82.596 205.117 102.250 1.00 87.70 C
ATOM 18 N4 C A1520 81.493 204.799 101.577 1.00 87.05 N
ATOM 19 C5 C A1520 82.624 206.281 103.064 1.00 88.29 C
ATOM 20 C6 C A1520 83.748 206.535 103.743 1.00 89.00 C
ATOM 21 P G A1521 89.449 209.248 102.939 1.00 88.79 P
ATOM 22 OP1 G A1521 90.596 209.880 103.639 1.00 88.70 O
ATOM 23 OP2 G A1521 88.304 210.086 102.487 1.00 90.35 O
ATOM 24 O5' G A1521 90.020 208.469 101.676 1.00 86.92 O
TER
ATOM 1 O3' C B1517 76.118 202.110 98.330 1.00 77.83 O
ATOM 2 P A B1518 75.046 202.992 99.133 1.00 78.78 P
ATOM 3 OP1 A B1518 73.828 202.179 99.368 1.00 80.32 O
ATOM 4 OP2 A B1518 74.925 204.313 98.472 1.00 79.40 O
ATOM 5 O5' A B1518 75.727 203.197 100.550 1.00 78.48 O
ATOM 6 C5' A B1518 75.431 204.361 101.318 1.00 80.54 C
ATOM 7 C4' A B1518 76.690 205.142 101.553 1.00 79.83 C
ATOM 8 O4' A B1518 77.498 205.131 100.345 1.00 78.47 O
ATOM 9 C3' A B1518 76.480 206.612 101.862 1.00 79.13 C
ATOM 10 O3' A B1518 76.095 206.822 103.222 1.00 75.25 O
ATOM 11 C2' A B1518 77.837 207.191 101.469 1.00 79.68 C
ATOM 12 O2' A B1518 78.852 206.924 102.415 1.00 80.15 O
ATOM 13 C1' A B1518 78.160 206.375 100.212 1.00 80.43 C
ATOM 14 N9 A B1518 77.722 207.015 98.968 1.00 82.47 N
ATOM 15 C8 A B1518 76.558 206.807 98.263 1.00 83.27 C
ATOM 16 N7 A B1518 76.439 207.564 97.198 1.00 83.67 N
ATOM 17 C5 A B1518 77.605 208.319 97.194 1.00 84.27 C
ATOM 18 C6 A B1518 78.085 209.323 96.324 1.00 84.44 C
ATOM 19 N6 A B1518 77.416 209.759 95.253 1.00 83.82 N
ATOM 20 N1 A B1518 79.289 209.872 96.600 1.00 84.18 N
ATOM 21 C2 A B1518 79.956 209.441 97.678 1.00 85.16 C
ATOM 22 N3 A B1518 79.610 208.512 98.574 1.00 85.42 N
ATOM 23 C4 A B1518 78.410 207.983 98.272 1.00 84.07 C
TER
ATOM 2 OP1 C A1520 84.904 211.864 105.501 1.00 93.77 O
ATOM 3 OP2 C A1520 83.601 210.250 103.991 1.00 92.35 O
ATOM 4 O5' C A1520 85.064 209.424 105.854 1.00 91.16 O
ATOM 5 C5' C A1520 86.462 209.389 105.486 1.00 90.51 C
ATOM 6 C4' C A1520 86.925 207.968 105.256 1.00 89.72 C
ATOM 7 O4' C A1520 85.811 207.048 105.331 1.00 90.78 O
ATOM 8 C3' C A1520 87.533 207.720 103.887 1.00 88.52 C
ATOM 9 O3' C A1520 88.908 208.083 103.906 1.00 88.68 O
ATOM 10 C2' C A1520 87.360 206.217 103.707 1.00 87.86 C
ATOM 11 O2' C A1520 88.395 205.486 104.325 1.00 85.42 O
ATOM 12 C1' C A1520 86.049 205.956 104.460 1.00 89.37 C
ATOM 13 N1 C A1520 84.830 205.701 103.661 1.00 89.58 N
ATOM 14 C2 C A1520 84.784 204.571 102.830 1.00 89.77 C
ATOM 15 O2 C A1520 85.785 203.835 102.751 1.00 89.96 O
ATOM 16 N3 C A1520 83.650 204.309 102.138 1.00 88.95 N
ATOM 17 C4 C A1520 82.596 205.117 102.250 1.00 87.70 C
ATOM 18 N4 C A1520 81.493 204.799 101.577 1.00 87.05 N
ATOM 19 C5 C A1520 82.624 206.281 103.064 1.00 88.29 C
ATOM 20 C6 C A1520 83.748 206.535 103.743 1.00 89.00 C
ATOM 21 P G A1521 89.449 209.248 102.939 1.00 88.79 P
ATOM 22 OP1 G A1521 90.596 209.880 103.639 1.00 88.70 O
ATOM 23 OP2 G A1521 88.304 210.086 102.487 1.00 90.35 O
ATOM 24 O5' G A1521 90.020 208.469 101.676 1.00 86.92 O
TER
ATOM 1 O3' C B1517 76.118 202.110 98.330 1.00 77.83 O
ATOM 2 P A B1518 75.046 202.992 99.133 1.00 78.78 P
ATOM 3 OP1 A B1518 73.828 202.179 99.368 1.00 80.32 O
ATOM 4 OP2 A B1518 74.925 204.313 98.472 1.00 79.40 O
ATOM 5 O5' A B1518 75.727 203.197 100.550 1.00 78.48 O
ATOM 6 C5' A B1518 75.431 204.361 101.318 1.00 80.54 C
ATOM 7 C4' A B1518 76.690 205.142 101.553 1.00 79.83 C
ATOM 8 O4' A B1518 77.498 205.131 100.345 1.00 78.47 O
ATOM 9 C3' A B1518 76.480 206.612 101.862 1.00 79.13 C
ATOM 10 O3' A B1518 76.095 206.822 103.222 1.00 75.25 O
ATOM 11 C2' A B1518 77.837 207.191 101.469 1.00 79.68 C
ATOM 12 O2' A B1518 78.852 206.924 102.415 1.00 80.15 O
ATOM 13 C1' A B1518 78.160 206.375 100.212 1.00 80.43 C
ATOM 14 N9 A B1518 77.722 207.015 98.968 1.00 82.47 N
ATOM 15 C8 A B1518 76.558 206.807 98.263 1.00 83.27 C
ATOM 16 N7 A B1518 76.439 207.564 97.198 1.00 83.67 N
ATOM 17 C5 A B1518 77.605 208.319 97.194 1.00 84.27 C
ATOM 18 C6 A B1518 78.085 209.323 96.324 1.00 84.44 C
ATOM 19 N6 A B1518 77.416 209.759 95.253 1.00 83.82 N
ATOM 20 N1 A B1518 79.289 209.872 96.600 1.00 84.18 N
ATOM 21 C2 A B1518 79.956 209.441 97.678 1.00 85.16 C
ATOM 22 N3 A B1518 79.610 208.512 98.574 1.00 85.42 N
ATOM 23 C4 A B1518 78.410 207.983 98.272 1.00 84.07 C
TER
Atoms:
C2: (84.784,204.571,102.830)
OP1: (84.904,211.864,105.501)
OP2: (83.601,210.250,103.991)
C4: (82.596,205.117,102.250)
O5': (85.064,209.424,105.854)
C3': (87.533,207.720,103.887)
C1': (86.049,205.956,104.460)
O4': (85.811,207.048,105.331)
C5': (86.462,209.389,105.486)
P: (84.132,210.608,105.333)
O2: (85.785,203.835,102.751)
C4': (86.925,207.968,105.256)
C2': (87.360,206.217,103.707)
O2': (88.395,205.486,104.325)
N1: (84.830,205.701,103.661)
N3: (83.650,204.309,102.138)
N4: (81.493,204.799,101.577)
C6: (83.748,206.535,103.743)
C5: (82.624,206.281,103.064)
O3': (88.908,208.083,103.906)
OP1: (84.904,211.864,105.501)
OP2: (83.601,210.250,103.991)
C4: (82.596,205.117,102.250)
O5': (85.064,209.424,105.854)
C3': (87.533,207.720,103.887)
C1': (86.049,205.956,104.460)
O4': (85.811,207.048,105.331)
C5': (86.462,209.389,105.486)
P: (84.132,210.608,105.333)
O2: (85.785,203.835,102.751)
C4': (86.925,207.968,105.256)
C2': (87.360,206.217,103.707)
O2': (88.395,205.486,104.325)
N1: (84.830,205.701,103.661)
N3: (83.650,204.309,102.138)
N4: (81.493,204.799,101.577)
C6: (83.748,206.535,103.743)
C5: (82.624,206.281,103.064)
O3': (88.908,208.083,103.906)
OP1: (73.828,202.179,99.368)
OP2: (74.925,204.313,98.472)
C3': (76.480,206.612,101.862)
C1': (78.160,206.375,100.212)
C5': (75.431,204.361,101.318)
O4': (77.498,205.131,100.345)
C8: (76.558,206.807,98.263)
O2': (78.852,206.924,102.415)
C6: (78.085,209.323,96.324)
C5: (77.605,208.319,97.194)
C4: (78.410,207.983,98.272)
P: (75.046,202.992,99.133)
C4': (76.690,205.142,101.553)
C2': (77.837,207.191,101.469)
C2: (79.956,209.441,97.678)
N1: (79.289,209.872,96.600)
N3: (79.610,208.512,98.574)
N6: (77.416,209.759,95.253)
N7: (76.439,207.564,97.198)
N9: (77.722,207.015,98.968)
O5': (75.727,203.197,100.550)
O3': (76.095,206.822,103.222)
OP2: (74.925,204.313,98.472)
C3': (76.480,206.612,101.862)
C1': (78.160,206.375,100.212)
C5': (75.431,204.361,101.318)
O4': (77.498,205.131,100.345)
C8: (76.558,206.807,98.263)
O2': (78.852,206.924,102.415)
C6: (78.085,209.323,96.324)
C5: (77.605,208.319,97.194)
C4: (78.410,207.983,98.272)
P: (75.046,202.992,99.133)
C4': (76.690,205.142,101.553)
C2': (77.837,207.191,101.469)
C2: (79.956,209.441,97.678)
N1: (79.289,209.872,96.600)
N3: (79.610,208.512,98.574)
N6: (77.416,209.759,95.253)
N7: (76.439,207.564,97.198)
N9: (77.722,207.015,98.968)
O5': (75.727,203.197,100.550)
O3': (76.095,206.822,103.222)
Image (generated by PyMOL):