Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 2 P G A 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 3 OP1 G A 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 4 OP2 G A 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 5 O5' G A 42 0.713 50.838 6.932 1.00 43.00 O
ATOM 6 C5' G A 42 0.883 51.024 8.333 1.00 43.49 C
ATOM 7 C4' G A 42 1.097 49.687 9.028 1.00 43.38 C
ATOM 8 O4' G A 42 -0.037 48.806 8.782 1.00 43.60 O
ATOM 9 C3' G A 42 2.341 48.920 8.591 1.00 42.92 C
ATOM 10 O3' G A 42 2.888 48.253 9.719 1.00 42.27 O
ATOM 11 C2' G A 42 1.773 47.964 7.539 1.00 43.26 C
ATOM 12 O2' G A 42 2.510 46.769 7.355 1.00 44.20 O
ATOM 13 C1' G A 42 0.374 47.658 8.066 1.00 43.31 C
ATOM 14 N9 G A 42 -0.513 47.451 6.936 1.00 43.19 N
ATOM 15 C8 G A 42 -1.286 48.390 6.293 1.00 43.25 C
ATOM 16 N7 G A 42 -1.957 47.907 5.285 1.00 43.21 N
ATOM 17 C5 G A 42 -1.594 46.565 5.254 1.00 43.62 C
ATOM 18 C6 G A 42 -1.994 45.524 4.374 1.00 43.89 C
ATOM 19 O6 G A 42 -2.779 45.587 3.414 1.00 43.84 O
ATOM 20 N1 G A 42 -1.389 44.308 4.696 1.00 43.66 N
ATOM 21 C2 G A 42 -0.506 44.126 5.735 1.00 43.28 C
ATOM 22 N2 G A 42 -0.021 42.890 5.885 1.00 43.03 N
ATOM 23 N3 G A 42 -0.119 45.088 6.561 1.00 43.36 N
ATOM 24 C4 G A 42 -0.702 46.274 6.263 1.00 43.25 C
ATOM 25 P G A 43 4.445 47.933 9.854 1.00 41.59 P
ATOM 26 OP1 G A 43 4.517 46.547 10.352 1.00 41.71 O
ATOM 27 OP2 G A 43 5.099 49.015 10.619 1.00 41.68 O
ATOM 28 O5' G A 43 4.984 47.981 8.349 1.00 42.79 O
TER
ATOM 1 O3' C B 40 -3.712 55.348 1.743 1.00 47.10 O
ATOM 2 P A B 41 -3.796 53.940 2.484 1.00 47.05 P
ATOM 3 OP1 A B 41 -2.516 53.221 2.280 1.00 47.33 O
ATOM 4 OP2 A B 41 -5.080 53.305 2.104 1.00 46.73 O
ATOM 5 O5' A B 41 -3.902 54.389 4.015 1.00 46.36 O
ATOM 6 C5' A B 41 -2.729 54.608 4.784 1.00 44.82 C
ATOM 7 C4' A B 41 -2.789 53.759 6.038 1.00 43.73 C
ATOM 8 O4' A B 41 -4.063 53.953 6.704 1.00 43.13 O
ATOM 9 C3' A B 41 -2.652 52.255 5.807 1.00 43.32 C
ATOM 10 O3' A B 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 11 C2' A B 41 -3.978 51.676 6.292 1.00 43.01 C
ATOM 12 O2' A B 41 -3.813 50.431 6.945 1.00 43.33 O
ATOM 13 C1' A B 41 -4.433 52.730 7.296 1.00 42.07 C
ATOM 14 N9 A B 41 -5.871 52.718 7.586 1.00 41.09 N
ATOM 15 C8 A B 41 -6.902 52.757 6.682 1.00 40.88 C
ATOM 16 N7 A B 41 -8.094 52.732 7.232 1.00 40.47 N
ATOM 17 C5 A B 41 -7.826 52.668 8.590 1.00 39.85 C
ATOM 18 C6 A B 41 -8.665 52.615 9.719 1.00 39.48 C
ATOM 19 N6 A B 41 -9.997 52.617 9.625 1.00 40.34 N
ATOM 20 N1 A B 41 -8.087 52.563 10.940 1.00 38.80 N
ATOM 21 C2 A B 41 -6.752 52.567 11.019 1.00 38.56 C
ATOM 22 N3 A B 41 -5.860 52.612 10.029 1.00 38.87 N
ATOM 23 C4 A B 41 -6.463 52.662 8.829 1.00 39.85 C
ATOM 24 P G B 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 25 OP1 G B 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 26 OP2 G B 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 27 O5' G B 42 0.713 50.838 6.932 1.00 43.00 O
TER
ATOM 2 P G A 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 3 OP1 G A 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 4 OP2 G A 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 5 O5' G A 42 0.713 50.838 6.932 1.00 43.00 O
ATOM 6 C5' G A 42 0.883 51.024 8.333 1.00 43.49 C
ATOM 7 C4' G A 42 1.097 49.687 9.028 1.00 43.38 C
ATOM 8 O4' G A 42 -0.037 48.806 8.782 1.00 43.60 O
ATOM 9 C3' G A 42 2.341 48.920 8.591 1.00 42.92 C
ATOM 10 O3' G A 42 2.888 48.253 9.719 1.00 42.27 O
ATOM 11 C2' G A 42 1.773 47.964 7.539 1.00 43.26 C
ATOM 12 O2' G A 42 2.510 46.769 7.355 1.00 44.20 O
ATOM 13 C1' G A 42 0.374 47.658 8.066 1.00 43.31 C
ATOM 14 N9 G A 42 -0.513 47.451 6.936 1.00 43.19 N
ATOM 15 C8 G A 42 -1.286 48.390 6.293 1.00 43.25 C
ATOM 16 N7 G A 42 -1.957 47.907 5.285 1.00 43.21 N
ATOM 17 C5 G A 42 -1.594 46.565 5.254 1.00 43.62 C
ATOM 18 C6 G A 42 -1.994 45.524 4.374 1.00 43.89 C
ATOM 19 O6 G A 42 -2.779 45.587 3.414 1.00 43.84 O
ATOM 20 N1 G A 42 -1.389 44.308 4.696 1.00 43.66 N
ATOM 21 C2 G A 42 -0.506 44.126 5.735 1.00 43.28 C
ATOM 22 N2 G A 42 -0.021 42.890 5.885 1.00 43.03 N
ATOM 23 N3 G A 42 -0.119 45.088 6.561 1.00 43.36 N
ATOM 24 C4 G A 42 -0.702 46.274 6.263 1.00 43.25 C
ATOM 25 P G A 43 4.445 47.933 9.854 1.00 41.59 P
ATOM 26 OP1 G A 43 4.517 46.547 10.352 1.00 41.71 O
ATOM 27 OP2 G A 43 5.099 49.015 10.619 1.00 41.68 O
ATOM 28 O5' G A 43 4.984 47.981 8.349 1.00 42.79 O
TER
ATOM 1 O3' C B 40 -3.712 55.348 1.743 1.00 47.10 O
ATOM 2 P A B 41 -3.796 53.940 2.484 1.00 47.05 P
ATOM 3 OP1 A B 41 -2.516 53.221 2.280 1.00 47.33 O
ATOM 4 OP2 A B 41 -5.080 53.305 2.104 1.00 46.73 O
ATOM 5 O5' A B 41 -3.902 54.389 4.015 1.00 46.36 O
ATOM 6 C5' A B 41 -2.729 54.608 4.784 1.00 44.82 C
ATOM 7 C4' A B 41 -2.789 53.759 6.038 1.00 43.73 C
ATOM 8 O4' A B 41 -4.063 53.953 6.704 1.00 43.13 O
ATOM 9 C3' A B 41 -2.652 52.255 5.807 1.00 43.32 C
ATOM 10 O3' A B 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 11 C2' A B 41 -3.978 51.676 6.292 1.00 43.01 C
ATOM 12 O2' A B 41 -3.813 50.431 6.945 1.00 43.33 O
ATOM 13 C1' A B 41 -4.433 52.730 7.296 1.00 42.07 C
ATOM 14 N9 A B 41 -5.871 52.718 7.586 1.00 41.09 N
ATOM 15 C8 A B 41 -6.902 52.757 6.682 1.00 40.88 C
ATOM 16 N7 A B 41 -8.094 52.732 7.232 1.00 40.47 N
ATOM 17 C5 A B 41 -7.826 52.668 8.590 1.00 39.85 C
ATOM 18 C6 A B 41 -8.665 52.615 9.719 1.00 39.48 C
ATOM 19 N6 A B 41 -9.997 52.617 9.625 1.00 40.34 N
ATOM 20 N1 A B 41 -8.087 52.563 10.940 1.00 38.80 N
ATOM 21 C2 A B 41 -6.752 52.567 11.019 1.00 38.56 C
ATOM 22 N3 A B 41 -5.860 52.612 10.029 1.00 38.87 N
ATOM 23 C4 A B 41 -6.463 52.662 8.829 1.00 39.85 C
ATOM 24 P G B 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 25 OP1 G B 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 26 OP2 G B 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 27 O5' G B 42 0.713 50.838 6.932 1.00 43.00 O
TER
Atoms:
OP1: (0.421,53.265,6.523)
OP2: (-0.001,51.579,4.647)
C3': (2.341,48.920,8.591)
C1': (0.374,47.658,8.066)
C5': (0.883,51.024,8.333)
O6: (-2.779,45.587,3.414)
O4': (-0.037,48.806,8.782)
C8: (-1.286,48.390,6.293)
C2: (-0.506,44.126,5.735)
C6: (-1.994,45.524,4.374)
C5: (-1.594,46.565,5.254)
C4: (-0.702,46.274,6.263)
P: (-0.056,51.937,6.082)
C4': (1.097,49.687,9.028)
C2': (1.773,47.964,7.539)
O2': (2.510,46.769,7.355)
N1: (-1.389,44.308,4.696)
N2: (-0.021,42.890,5.885)
N3: (-0.119,45.088,6.561)
N7: (-1.957,47.907,5.285)
N9: (-0.513,47.451,6.936)
O5': (0.713,50.838,6.932)
O3': (2.888,48.253,9.719)
OP2: (-0.001,51.579,4.647)
C3': (2.341,48.920,8.591)
C1': (0.374,47.658,8.066)
C5': (0.883,51.024,8.333)
O6: (-2.779,45.587,3.414)
O4': (-0.037,48.806,8.782)
C8: (-1.286,48.390,6.293)
C2: (-0.506,44.126,5.735)
C6: (-1.994,45.524,4.374)
C5: (-1.594,46.565,5.254)
C4: (-0.702,46.274,6.263)
P: (-0.056,51.937,6.082)
C4': (1.097,49.687,9.028)
C2': (1.773,47.964,7.539)
O2': (2.510,46.769,7.355)
N1: (-1.389,44.308,4.696)
N2: (-0.021,42.890,5.885)
N3: (-0.119,45.088,6.561)
N7: (-1.957,47.907,5.285)
N9: (-0.513,47.451,6.936)
O5': (0.713,50.838,6.932)
O3': (2.888,48.253,9.719)
OP1: (-2.516,53.221,2.280)
OP2: (-5.080,53.305,2.104)
C3': (-2.652,52.255,5.807)
C1': (-4.433,52.730,7.296)
C5': (-2.729,54.608,4.784)
O4': (-4.063,53.953,6.704)
C8: (-6.902,52.757,6.682)
O2': (-3.813,50.431,6.945)
C6: (-8.665,52.615,9.719)
C5: (-7.826,52.668,8.590)
C4: (-6.463,52.662,8.829)
P: (-3.796,53.940,2.484)
C4': (-2.789,53.759,6.038)
C2': (-3.978,51.676,6.292)
C2: (-6.752,52.567,11.019)
N1: (-8.087,52.563,10.940)
N3: (-5.860,52.612,10.029)
N6: (-9.997,52.617,9.625)
N7: (-8.094,52.732,7.232)
N9: (-5.871,52.718,7.586)
O5': (-3.902,54.389,4.015)
O3': (-1.564,51.743,6.577)
OP2: (-5.080,53.305,2.104)
C3': (-2.652,52.255,5.807)
C1': (-4.433,52.730,7.296)
C5': (-2.729,54.608,4.784)
O4': (-4.063,53.953,6.704)
C8: (-6.902,52.757,6.682)
O2': (-3.813,50.431,6.945)
C6: (-8.665,52.615,9.719)
C5: (-7.826,52.668,8.590)
C4: (-6.463,52.662,8.829)
P: (-3.796,53.940,2.484)
C4': (-2.789,53.759,6.038)
C2': (-3.978,51.676,6.292)
C2: (-6.752,52.567,11.019)
N1: (-8.087,52.563,10.940)
N3: (-5.860,52.612,10.029)
N6: (-9.997,52.617,9.625)
N7: (-8.094,52.732,7.232)
N9: (-5.871,52.718,7.586)
O5': (-3.902,54.389,4.015)
O3': (-1.564,51.743,6.577)
Image (generated by PyMOL):