Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12650:12649
Extra
PDB:
ATOM 1 O3' A A2649 -2.370 15.753 11.269 1.00 47.46 O
ATOM 2 P G A2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 3 OP1 G A2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 4 OP2 G A2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 5 O5' G A2650 -4.831 15.718 10.992 1.00 59.86 O
ATOM 6 C5' G A2650 -5.838 16.336 11.781 1.00 59.94 C
ATOM 7 C4' G A2650 -6.495 15.367 12.727 1.00 59.62 C
ATOM 8 O4' G A2650 -6.526 14.051 12.144 1.00 59.65 O
ATOM 9 C3' G A2650 -5.821 15.212 14.082 1.00 58.93 C
ATOM 10 O3' G A2650 -6.355 16.121 15.037 1.00 58.88 O
ATOM 11 C2' G A2650 -6.088 13.757 14.469 1.00 58.66 C
ATOM 12 O2' G A2650 -7.309 13.678 15.176 1.00 58.73 O
ATOM 13 C1' G A2650 -6.297 13.067 13.126 1.00 59.10 C
ATOM 14 N9 G A2650 -5.171 12.246 12.664 1.00 58.85 N
ATOM 15 C8 G A2650 -3.947 12.675 12.253 1.00 58.74 C
ATOM 16 N7 G A2650 -3.274 11.744 11.661 1.00 58.66 N
ATOM 17 C5 G A2650 -4.101 10.659 11.653 1.00 58.74 C
ATOM 18 C6 G A2650 -3.891 9.385 11.125 1.00 58.73 C
ATOM 19 O6 G A2650 -2.884 8.968 10.585 1.00 58.63 O
ATOM 20 N1 G A2650 -4.975 8.559 11.269 1.00 58.87 N
ATOM 21 C2 G A2650 -6.154 8.938 11.856 1.00 59.01 C
ATOM 22 N2 G A2650 -7.117 7.986 11.921 1.00 59.15 N
ATOM 23 N3 G A2650 -6.362 10.155 12.346 1.00 59.03 N
ATOM 24 C4 G A2650 -5.292 10.956 12.221 1.00 58.88 C
ATOM 25 P C A2651 -5.508 17.369 15.581 1.00 62.86 P
ATOM 26 OP1 C A2651 -4.179 16.855 15.974 1.00 62.30 O
ATOM 27 OP2 C A2651 -6.346 18.057 16.612 1.00 62.85 O
ATOM 28 O5' C A2651 -5.375 18.292 14.298 1.00 63.43 O
TER
ATOM 1 O3' A B2648 3.980 16.775 9.861 1.00 50.19 O
ATOM 2 P A B2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 3 OP1 A B2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 4 OP2 A B2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 5 O5' A B2649 1.504 16.872 10.405 1.00 47.00 O
ATOM 6 C5' A B2649 0.774 15.681 10.626 1.00 46.91 C
ATOM 7 C4' A B2649 -0.004 15.708 11.920 1.00 46.63 C
ATOM 8 O4' A B2649 0.746 16.378 12.944 1.00 46.19 O
ATOM 9 C3' A B2649 -1.333 16.460 11.923 1.00 47.07 C
ATOM 10 O3' A B2649 -2.370 15.753 11.269 1.00 47.46 O
ATOM 11 C2' A B2649 -1.579 16.661 13.423 1.00 46.63 C
ATOM 12 O2' A B2649 -2.218 15.527 14.019 1.00 46.41 O
ATOM 13 C1' A B2649 -0.139 16.777 13.965 1.00 46.10 C
ATOM 14 N9 A B2649 0.170 18.141 14.347 1.00 46.12 N
ATOM 15 C8 A B2649 0.933 19.050 13.717 1.00 46.31 C
ATOM 16 N7 A B2649 0.928 20.201 14.351 1.00 46.29 N
ATOM 17 C5 A B2649 0.088 20.004 15.443 1.00 46.08 C
ATOM 18 C6 A B2649 -0.299 20.823 16.522 1.00 45.96 C
ATOM 19 N6 A B2649 0.112 22.083 16.653 1.00 46.06 N
ATOM 20 N1 A B2649 -1.104 20.295 17.476 1.00 45.75 N
ATOM 21 C2 A B2649 -1.501 19.017 17.329 1.00 45.67 C
ATOM 22 N3 A B2649 -1.196 18.139 16.358 1.00 45.77 N
ATOM 23 C4 A B2649 -0.383 18.718 15.444 1.00 45.97 C
ATOM 24 P G B2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 25 OP1 G B2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 26 OP2 G B2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 27 O5' G B2650 -4.831 15.718 10.992 1.00 59.86 O
TER
ATOM 2 P G A2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 3 OP1 G A2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 4 OP2 G A2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 5 O5' G A2650 -4.831 15.718 10.992 1.00 59.86 O
ATOM 6 C5' G A2650 -5.838 16.336 11.781 1.00 59.94 C
ATOM 7 C4' G A2650 -6.495 15.367 12.727 1.00 59.62 C
ATOM 8 O4' G A2650 -6.526 14.051 12.144 1.00 59.65 O
ATOM 9 C3' G A2650 -5.821 15.212 14.082 1.00 58.93 C
ATOM 10 O3' G A2650 -6.355 16.121 15.037 1.00 58.88 O
ATOM 11 C2' G A2650 -6.088 13.757 14.469 1.00 58.66 C
ATOM 12 O2' G A2650 -7.309 13.678 15.176 1.00 58.73 O
ATOM 13 C1' G A2650 -6.297 13.067 13.126 1.00 59.10 C
ATOM 14 N9 G A2650 -5.171 12.246 12.664 1.00 58.85 N
ATOM 15 C8 G A2650 -3.947 12.675 12.253 1.00 58.74 C
ATOM 16 N7 G A2650 -3.274 11.744 11.661 1.00 58.66 N
ATOM 17 C5 G A2650 -4.101 10.659 11.653 1.00 58.74 C
ATOM 18 C6 G A2650 -3.891 9.385 11.125 1.00 58.73 C
ATOM 19 O6 G A2650 -2.884 8.968 10.585 1.00 58.63 O
ATOM 20 N1 G A2650 -4.975 8.559 11.269 1.00 58.87 N
ATOM 21 C2 G A2650 -6.154 8.938 11.856 1.00 59.01 C
ATOM 22 N2 G A2650 -7.117 7.986 11.921 1.00 59.15 N
ATOM 23 N3 G A2650 -6.362 10.155 12.346 1.00 59.03 N
ATOM 24 C4 G A2650 -5.292 10.956 12.221 1.00 58.88 C
ATOM 25 P C A2651 -5.508 17.369 15.581 1.00 62.86 P
ATOM 26 OP1 C A2651 -4.179 16.855 15.974 1.00 62.30 O
ATOM 27 OP2 C A2651 -6.346 18.057 16.612 1.00 62.85 O
ATOM 28 O5' C A2651 -5.375 18.292 14.298 1.00 63.43 O
TER
ATOM 1 O3' A B2648 3.980 16.775 9.861 1.00 50.19 O
ATOM 2 P A B2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 3 OP1 A B2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 4 OP2 A B2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 5 O5' A B2649 1.504 16.872 10.405 1.00 47.00 O
ATOM 6 C5' A B2649 0.774 15.681 10.626 1.00 46.91 C
ATOM 7 C4' A B2649 -0.004 15.708 11.920 1.00 46.63 C
ATOM 8 O4' A B2649 0.746 16.378 12.944 1.00 46.19 O
ATOM 9 C3' A B2649 -1.333 16.460 11.923 1.00 47.07 C
ATOM 10 O3' A B2649 -2.370 15.753 11.269 1.00 47.46 O
ATOM 11 C2' A B2649 -1.579 16.661 13.423 1.00 46.63 C
ATOM 12 O2' A B2649 -2.218 15.527 14.019 1.00 46.41 O
ATOM 13 C1' A B2649 -0.139 16.777 13.965 1.00 46.10 C
ATOM 14 N9 A B2649 0.170 18.141 14.347 1.00 46.12 N
ATOM 15 C8 A B2649 0.933 19.050 13.717 1.00 46.31 C
ATOM 16 N7 A B2649 0.928 20.201 14.351 1.00 46.29 N
ATOM 17 C5 A B2649 0.088 20.004 15.443 1.00 46.08 C
ATOM 18 C6 A B2649 -0.299 20.823 16.522 1.00 45.96 C
ATOM 19 N6 A B2649 0.112 22.083 16.653 1.00 46.06 N
ATOM 20 N1 A B2649 -1.104 20.295 17.476 1.00 45.75 N
ATOM 21 C2 A B2649 -1.501 19.017 17.329 1.00 45.67 C
ATOM 22 N3 A B2649 -1.196 18.139 16.358 1.00 45.77 N
ATOM 23 C4 A B2649 -0.383 18.718 15.444 1.00 45.97 C
ATOM 24 P G B2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 25 OP1 G B2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 26 OP2 G B2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 27 O5' G B2650 -4.831 15.718 10.992 1.00 59.86 O
TER
Atoms:
OP1: (-3.336,16.306,9.071)
OP2: (-3.547,17.901,11.003)
C3': (-5.821,15.212,14.082)
C1': (-6.297,13.067,13.126)
C5': (-5.838,16.336,11.781)
O6: (-2.884,8.968,10.585)
O4': (-6.526,14.051,12.144)
C8: (-3.947,12.675,12.253)
C2: (-6.154,8.938,11.856)
C6: (-3.891,9.385,11.125)
C5: (-4.101,10.659,11.653)
C4: (-5.292,10.956,12.221)
P: (-3.533,16.524,10.502)
C4': (-6.495,15.367,12.727)
C2': (-6.088,13.757,14.469)
O2': (-7.309,13.678,15.176)
N1: (-4.975,8.559,11.269)
N2: (-7.117,7.986,11.921)
N3: (-6.362,10.155,12.346)
N7: (-3.274,11.744,11.661)
N9: (-5.171,12.246,12.664)
O5': (-4.831,15.718,10.992)
O3': (-6.355,16.121,15.037)
OP2: (-3.547,17.901,11.003)
C3': (-5.821,15.212,14.082)
C1': (-6.297,13.067,13.126)
C5': (-5.838,16.336,11.781)
O6: (-2.884,8.968,10.585)
O4': (-6.526,14.051,12.144)
C8: (-3.947,12.675,12.253)
C2: (-6.154,8.938,11.856)
C6: (-3.891,9.385,11.125)
C5: (-4.101,10.659,11.653)
C4: (-5.292,10.956,12.221)
P: (-3.533,16.524,10.502)
C4': (-6.495,15.367,12.727)
C2': (-6.088,13.757,14.469)
O2': (-7.309,13.678,15.176)
N1: (-4.975,8.559,11.269)
N2: (-7.117,7.986,11.921)
N3: (-6.362,10.155,12.346)
N7: (-3.274,11.744,11.661)
N9: (-5.171,12.246,12.664)
O5': (-4.831,15.718,10.992)
O3': (-6.355,16.121,15.037)
OP1: (2.302,15.872,8.221)
OP2: (2.483,18.373,8.621)
C3': (-1.333,16.460,11.923)
C1': (-0.139,16.777,13.965)
C5': (0.774,15.681,10.626)
O4': (0.746,16.378,12.944)
C8: (0.933,19.050,13.717)
O2': (-2.218,15.527,14.019)
C6: (-0.299,20.823,16.522)
C5: (0.088,20.004,15.443)
C4: (-0.383,18.718,15.444)
P: (2.513,16.994,9.166)
C4': (-0.004,15.708,11.920)
C2': (-1.579,16.661,13.423)
C2: (-1.501,19.017,17.329)
N1: (-1.104,20.295,17.476)
N3: (-1.196,18.139,16.358)
N6: (0.112,22.083,16.653)
N7: (0.928,20.201,14.351)
N9: (0.170,18.141,14.347)
O5': (1.504,16.872,10.405)
O3': (-2.370,15.753,11.269)
OP2: (2.483,18.373,8.621)
C3': (-1.333,16.460,11.923)
C1': (-0.139,16.777,13.965)
C5': (0.774,15.681,10.626)
O4': (0.746,16.378,12.944)
C8: (0.933,19.050,13.717)
O2': (-2.218,15.527,14.019)
C6: (-0.299,20.823,16.522)
C5: (0.088,20.004,15.443)
C4: (-0.383,18.718,15.444)
P: (2.513,16.994,9.166)
C4': (-0.004,15.708,11.920)
C2': (-1.579,16.661,13.423)
C2: (-1.501,19.017,17.329)
N1: (-1.104,20.295,17.476)
N3: (-1.196,18.139,16.358)
N6: (0.112,22.083,16.653)
N7: (0.928,20.201,14.351)
N9: (0.170,18.141,14.347)
O5': (1.504,16.872,10.405)
O3': (-2.370,15.753,11.269)
Image (generated by PyMOL):