Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A13:A1394
Extra
PDB:
ATOM 1 O3' U A 12 -46.461 89.804 70.969 1.00 20.19 O
ATOM 2 P G A 13 -48.021 89.528 71.076 1.00 14.61 P
ATOM 3 OP1 G A 13 -48.680 90.808 71.457 1.00 14.61 O
ATOM 4 OP2 G A 13 -48.187 88.346 71.952 1.00 14.61 O
ATOM 5 O5' G A 13 -48.404 89.153 69.582 1.00 14.61 O
ATOM 6 C5' G A 13 -49.743 88.835 69.236 1.00 14.61 C
ATOM 7 C4' G A 13 -49.889 88.656 67.760 1.00 14.61 C
ATOM 8 O4' G A 13 -49.777 89.945 67.116 1.00 14.61 O
ATOM 9 C3' G A 13 -48.823 87.797 67.105 1.00 14.61 C
ATOM 10 O3' G A 13 -49.129 86.409 67.175 1.00 14.61 O
ATOM 11 C2' G A 13 -48.775 88.343 65.683 1.00 14.61 C
ATOM 12 O2' G A 13 -49.802 87.780 64.891 1.00 14.61 O
ATOM 13 C1' G A 13 -49.091 89.822 65.895 1.00 14.61 C
ATOM 14 N9 G A 13 -47.877 90.661 65.951 1.00 14.51 N
ATOM 15 C8 G A 13 -47.511 91.459 67.012 1.00 14.51 C
ATOM 16 N7 G A 13 -46.410 92.099 66.801 1.00 14.51 N
ATOM 17 C5 G A 13 -46.039 91.707 65.517 1.00 14.51 C
ATOM 18 C6 G A 13 -44.907 92.094 64.753 1.00 14.51 C
ATOM 19 O6 G A 13 -43.999 92.886 65.073 1.00 14.51 O
ATOM 20 N1 G A 13 -44.884 91.465 63.510 1.00 14.51 N
ATOM 21 C2 G A 13 -45.833 90.591 63.047 1.00 14.51 C
ATOM 22 N2 G A 13 -45.588 90.135 61.799 1.00 14.51 N
ATOM 23 N3 G A 13 -46.906 90.219 63.753 1.00 14.51 N
ATOM 24 C4 G A 13 -46.934 90.821 64.965 1.00 14.51 C
ATOM 25 P A A 14 -48.041 85.343 67.718 1.00 8.10 P
ATOM 26 OP1 A A 14 -48.753 84.043 67.883 1.00 8.10 O
ATOM 27 OP2 A A 14 -47.377 85.952 68.904 1.00 8.10 O
ATOM 28 O5' A A 14 -47.006 85.230 66.506 1.00 8.10 O
TER
ATOM 1 O3' C B1393 -49.741 97.312 73.846 1.00 8.57 O
ATOM 2 P A B1394 -49.729 95.712 73.728 1.00 10.14 P
ATOM 3 OP1 A B1394 -50.731 95.185 74.698 1.00 10.14 O
ATOM 4 OP2 A B1394 -48.303 95.274 73.839 1.00 10.14 O
ATOM 5 O5' A B1394 -50.245 95.486 72.247 1.00 10.14 O
ATOM 6 C5' A B1394 -51.603 95.749 71.889 1.00 10.14 C
ATOM 7 C4' A B1394 -52.008 94.950 70.676 1.00 10.14 C
ATOM 8 O4' A B1394 -51.192 95.373 69.549 1.00 10.14 O
ATOM 9 C3' A B1394 -51.795 93.448 70.814 1.00 10.14 C
ATOM 10 O3' A B1394 -52.777 92.749 70.055 1.00 10.14 O
ATOM 11 C2' A B1394 -50.413 93.253 70.206 1.00 10.14 C
ATOM 12 O2' A B1394 -50.150 91.948 69.740 1.00 10.14 O
ATOM 13 C1' A B1394 -50.416 94.290 69.079 1.00 10.14 C
ATOM 14 N9 A B1394 -49.076 94.794 68.736 1.00 10.27 N
ATOM 15 C8 A B1394 -48.112 95.261 69.605 1.00 10.27 C
ATOM 16 N7 A B1394 -46.989 95.633 69.027 1.00 10.27 N
ATOM 17 C5 A B1394 -47.225 95.387 67.688 1.00 10.27 C
ATOM 18 C6 A B1394 -46.421 95.561 66.569 1.00 10.27 C
ATOM 19 N6 A B1394 -45.182 96.029 66.654 1.00 10.27 N
ATOM 20 N1 A B1394 -46.919 95.241 65.371 1.00 10.27 N
ATOM 21 C2 A B1394 -48.152 94.762 65.334 1.00 10.27 C
ATOM 22 N3 A B1394 -49.018 94.542 66.311 1.00 10.27 N
ATOM 23 C4 A B1394 -48.488 94.877 67.486 1.00 10.27 C
ATOM 24 P C B1395 -53.851 91.827 70.794 1.00 33.42 P
ATOM 25 OP1 C B1395 -53.213 91.304 71.998 1.00 33.42 O
ATOM 26 OP2 C B1395 -54.357 90.876 69.805 1.00 33.42 O
ATOM 27 O5' C B1395 -54.985 92.853 71.190 1.00 33.42 O
TER
ATOM 2 P G A 13 -48.021 89.528 71.076 1.00 14.61 P
ATOM 3 OP1 G A 13 -48.680 90.808 71.457 1.00 14.61 O
ATOM 4 OP2 G A 13 -48.187 88.346 71.952 1.00 14.61 O
ATOM 5 O5' G A 13 -48.404 89.153 69.582 1.00 14.61 O
ATOM 6 C5' G A 13 -49.743 88.835 69.236 1.00 14.61 C
ATOM 7 C4' G A 13 -49.889 88.656 67.760 1.00 14.61 C
ATOM 8 O4' G A 13 -49.777 89.945 67.116 1.00 14.61 O
ATOM 9 C3' G A 13 -48.823 87.797 67.105 1.00 14.61 C
ATOM 10 O3' G A 13 -49.129 86.409 67.175 1.00 14.61 O
ATOM 11 C2' G A 13 -48.775 88.343 65.683 1.00 14.61 C
ATOM 12 O2' G A 13 -49.802 87.780 64.891 1.00 14.61 O
ATOM 13 C1' G A 13 -49.091 89.822 65.895 1.00 14.61 C
ATOM 14 N9 G A 13 -47.877 90.661 65.951 1.00 14.51 N
ATOM 15 C8 G A 13 -47.511 91.459 67.012 1.00 14.51 C
ATOM 16 N7 G A 13 -46.410 92.099 66.801 1.00 14.51 N
ATOM 17 C5 G A 13 -46.039 91.707 65.517 1.00 14.51 C
ATOM 18 C6 G A 13 -44.907 92.094 64.753 1.00 14.51 C
ATOM 19 O6 G A 13 -43.999 92.886 65.073 1.00 14.51 O
ATOM 20 N1 G A 13 -44.884 91.465 63.510 1.00 14.51 N
ATOM 21 C2 G A 13 -45.833 90.591 63.047 1.00 14.51 C
ATOM 22 N2 G A 13 -45.588 90.135 61.799 1.00 14.51 N
ATOM 23 N3 G A 13 -46.906 90.219 63.753 1.00 14.51 N
ATOM 24 C4 G A 13 -46.934 90.821 64.965 1.00 14.51 C
ATOM 25 P A A 14 -48.041 85.343 67.718 1.00 8.10 P
ATOM 26 OP1 A A 14 -48.753 84.043 67.883 1.00 8.10 O
ATOM 27 OP2 A A 14 -47.377 85.952 68.904 1.00 8.10 O
ATOM 28 O5' A A 14 -47.006 85.230 66.506 1.00 8.10 O
TER
ATOM 1 O3' C B1393 -49.741 97.312 73.846 1.00 8.57 O
ATOM 2 P A B1394 -49.729 95.712 73.728 1.00 10.14 P
ATOM 3 OP1 A B1394 -50.731 95.185 74.698 1.00 10.14 O
ATOM 4 OP2 A B1394 -48.303 95.274 73.839 1.00 10.14 O
ATOM 5 O5' A B1394 -50.245 95.486 72.247 1.00 10.14 O
ATOM 6 C5' A B1394 -51.603 95.749 71.889 1.00 10.14 C
ATOM 7 C4' A B1394 -52.008 94.950 70.676 1.00 10.14 C
ATOM 8 O4' A B1394 -51.192 95.373 69.549 1.00 10.14 O
ATOM 9 C3' A B1394 -51.795 93.448 70.814 1.00 10.14 C
ATOM 10 O3' A B1394 -52.777 92.749 70.055 1.00 10.14 O
ATOM 11 C2' A B1394 -50.413 93.253 70.206 1.00 10.14 C
ATOM 12 O2' A B1394 -50.150 91.948 69.740 1.00 10.14 O
ATOM 13 C1' A B1394 -50.416 94.290 69.079 1.00 10.14 C
ATOM 14 N9 A B1394 -49.076 94.794 68.736 1.00 10.27 N
ATOM 15 C8 A B1394 -48.112 95.261 69.605 1.00 10.27 C
ATOM 16 N7 A B1394 -46.989 95.633 69.027 1.00 10.27 N
ATOM 17 C5 A B1394 -47.225 95.387 67.688 1.00 10.27 C
ATOM 18 C6 A B1394 -46.421 95.561 66.569 1.00 10.27 C
ATOM 19 N6 A B1394 -45.182 96.029 66.654 1.00 10.27 N
ATOM 20 N1 A B1394 -46.919 95.241 65.371 1.00 10.27 N
ATOM 21 C2 A B1394 -48.152 94.762 65.334 1.00 10.27 C
ATOM 22 N3 A B1394 -49.018 94.542 66.311 1.00 10.27 N
ATOM 23 C4 A B1394 -48.488 94.877 67.486 1.00 10.27 C
ATOM 24 P C B1395 -53.851 91.827 70.794 1.00 33.42 P
ATOM 25 OP1 C B1395 -53.213 91.304 71.998 1.00 33.42 O
ATOM 26 OP2 C B1395 -54.357 90.876 69.805 1.00 33.42 O
ATOM 27 O5' C B1395 -54.985 92.853 71.190 1.00 33.42 O
TER
Atoms:
OP1: (-48.680,90.808,71.457)
OP2: (-48.187,88.346,71.952)
C3': (-48.823,87.797,67.105)
C1': (-49.091,89.822,65.895)
C5': (-49.743,88.835,69.236)
O6: (-43.999,92.886,65.073)
O4': (-49.777,89.945,67.116)
C8: (-47.511,91.459,67.012)
C2: (-45.833,90.591,63.047)
C6: (-44.907,92.094,64.753)
C5: (-46.039,91.707,65.517)
C4: (-46.934,90.821,64.965)
P: (-48.021,89.528,71.076)
C4': (-49.889,88.656,67.760)
C2': (-48.775,88.343,65.683)
O2': (-49.802,87.780,64.891)
N1: (-44.884,91.465,63.510)
N2: (-45.588,90.135,61.799)
N3: (-46.906,90.219,63.753)
N7: (-46.410,92.099,66.801)
N9: (-47.877,90.661,65.951)
O5': (-48.404,89.153,69.582)
O3': (-49.129,86.409,67.175)
OP2: (-48.187,88.346,71.952)
C3': (-48.823,87.797,67.105)
C1': (-49.091,89.822,65.895)
C5': (-49.743,88.835,69.236)
O6: (-43.999,92.886,65.073)
O4': (-49.777,89.945,67.116)
C8: (-47.511,91.459,67.012)
C2: (-45.833,90.591,63.047)
C6: (-44.907,92.094,64.753)
C5: (-46.039,91.707,65.517)
C4: (-46.934,90.821,64.965)
P: (-48.021,89.528,71.076)
C4': (-49.889,88.656,67.760)
C2': (-48.775,88.343,65.683)
O2': (-49.802,87.780,64.891)
N1: (-44.884,91.465,63.510)
N2: (-45.588,90.135,61.799)
N3: (-46.906,90.219,63.753)
N7: (-46.410,92.099,66.801)
N9: (-47.877,90.661,65.951)
O5': (-48.404,89.153,69.582)
O3': (-49.129,86.409,67.175)
OP1: (-50.731,95.185,74.698)
OP2: (-48.303,95.274,73.839)
C3': (-51.795,93.448,70.814)
C1': (-50.416,94.290,69.079)
C5': (-51.603,95.749,71.889)
O4': (-51.192,95.373,69.549)
C8: (-48.112,95.261,69.605)
O2': (-50.150,91.948,69.740)
C6: (-46.421,95.561,66.569)
C5: (-47.225,95.387,67.688)
C4: (-48.488,94.877,67.486)
P: (-49.729,95.712,73.728)
C4': (-52.008,94.950,70.676)
C2': (-50.413,93.253,70.206)
C2: (-48.152,94.762,65.334)
N1: (-46.919,95.241,65.371)
N3: (-49.018,94.542,66.311)
N6: (-45.182,96.029,66.654)
N7: (-46.989,95.633,69.027)
N9: (-49.076,94.794,68.736)
O5': (-50.245,95.486,72.247)
O3': (-52.777,92.749,70.055)
OP2: (-48.303,95.274,73.839)
C3': (-51.795,93.448,70.814)
C1': (-50.416,94.290,69.079)
C5': (-51.603,95.749,71.889)
O4': (-51.192,95.373,69.549)
C8: (-48.112,95.261,69.605)
O2': (-50.150,91.948,69.740)
C6: (-46.421,95.561,66.569)
C5: (-47.225,95.387,67.688)
C4: (-48.488,94.877,67.486)
P: (-49.729,95.712,73.728)
C4': (-52.008,94.950,70.676)
C2': (-50.413,93.253,70.206)
C2: (-48.152,94.762,65.334)
N1: (-46.919,95.241,65.371)
N3: (-49.018,94.542,66.311)
N6: (-45.182,96.029,66.654)
N7: (-46.989,95.633,69.027)
N9: (-49.076,94.794,68.736)
O5': (-50.245,95.486,72.247)
O3': (-52.777,92.749,70.055)
Image (generated by PyMOL):