Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:69:61627
Extra
PDB:
ATOM 1 O3' U A 8 245.884 0.406 249.501 1.00 51.82 O
ATOM 2 P G A 9 245.653 -0.300 250.914 1.00 52.81 P
ATOM 3 OP1 G A 9 244.651 -1.373 250.733 1.00 52.76 O
ATOM 4 OP2 G A 9 245.382 0.784 251.877 1.00 52.56 O
ATOM 5 O5' G A 9 247.056 -0.949 251.248 1.00 53.58 O
ATOM 6 C5' G A 9 247.387 -1.276 252.581 1.00 54.05 C
ATOM 7 C4' G A 9 248.774 -1.819 252.674 1.00 54.77 C
ATOM 8 O4' G A 9 248.916 -2.932 251.766 1.00 55.00 O
ATOM 9 C3' G A 9 249.879 -0.875 252.281 1.00 54.85 C
ATOM 10 O3' G A 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 11 C2' G A 9 250.976 -1.838 251.881 1.00 55.53 C
ATOM 12 O2' G A 9 251.557 -2.406 253.035 1.00 56.17 O
ATOM 13 C1' G A 9 250.191 -2.933 251.210 1.00 55.42 C
ATOM 14 N9 G A 9 250.060 -2.752 249.766 1.00 55.08 N
ATOM 15 C8 G A 9 248.866 -2.698 249.113 1.00 54.49 C
ATOM 16 N7 G A 9 248.988 -2.607 247.829 1.00 54.35 N
ATOM 17 C5 G A 9 250.365 -2.636 247.616 1.00 54.89 C
ATOM 18 C6 G A 9 251.133 -2.572 246.412 1.00 55.07 C
ATOM 19 O6 G A 9 250.741 -2.463 245.243 1.00 54.78 O
ATOM 20 N1 G A 9 252.497 -2.629 246.674 1.00 55.70 N
ATOM 21 C2 G A 9 253.019 -2.732 247.935 1.00 56.10 C
ATOM 22 N2 G A 9 254.352 -2.763 248.039 1.00 56.73 N
ATOM 23 N3 G A 9 252.319 -2.818 249.044 1.00 55.96 N
ATOM 24 C4 G A 9 251.020 -2.751 248.813 1.00 55.34 C
ATOM 25 P A A 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 26 OP1 A A 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 27 OP2 A A 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 28 O5' A A 10 251.667 1.683 252.202 1.00 55.59 O
TER
ATOM 1 O3' C B1626 240.300 -6.117 247.506 1.00 56.35 O
ATOM 2 P A B1627 240.738 -4.952 248.495 1.00 53.64 P
ATOM 3 OP1 A B1627 239.805 -4.989 249.654 1.00 53.85 O
ATOM 4 OP2 A B1627 240.834 -3.700 247.685 1.00 53.58 O
ATOM 5 O5' A B1627 242.188 -5.430 248.947 1.00 53.64 O
ATOM 6 C5' A B1627 242.356 -6.613 249.710 1.00 53.69 C
ATOM 7 C4' A B1627 243.732 -6.695 250.316 1.00 53.76 C
ATOM 8 O4' A B1627 244.710 -6.886 249.256 1.00 53.63 O
ATOM 9 C3' A B1627 244.177 -5.464 251.081 1.00 53.93 C
ATOM 10 O3' A B1627 245.030 -5.867 252.136 1.00 54.07 O
ATOM 11 C2' A B1627 244.982 -4.702 250.030 1.00 53.82 C
ATOM 12 O2' A B1627 245.926 -3.790 250.544 1.00 53.97 O
ATOM 13 C1' A B1627 245.650 -5.841 249.280 1.00 53.69 C
ATOM 14 N9 A B1627 246.005 -5.517 247.903 1.00 53.55 N
ATOM 15 C8 A B1627 245.218 -5.090 246.871 1.00 53.42 C
ATOM 16 N7 A B1627 245.898 -4.898 245.756 1.00 53.33 N
ATOM 17 C5 A B1627 247.192 -5.218 246.090 1.00 53.42 C
ATOM 18 C6 A B1627 248.384 -5.250 245.353 1.00 53.44 C
ATOM 19 N6 A B1627 248.495 -4.916 244.075 1.00 53.34 N
ATOM 20 N1 A B1627 249.492 -5.654 245.994 1.00 53.59 N
ATOM 21 C2 A B1627 249.386 -6.007 247.284 1.00 53.69 C
ATOM 22 N3 A B1627 248.339 -6.012 248.089 1.00 53.69 N
ATOM 23 C4 A B1627 247.264 -5.611 247.411 1.00 53.55 C
ATOM 24 P C B1628 244.480 -5.908 253.626 1.00 89.14 P
ATOM 25 OP1 C B1628 243.529 -4.806 253.768 1.00 89.24 O
ATOM 26 OP2 C B1628 245.653 -5.944 254.504 1.00 89.30 O
ATOM 27 O5' C B1628 243.717 -7.296 253.695 1.00 89.07 O
TER
ATOM 2 P G A 9 245.653 -0.300 250.914 1.00 52.81 P
ATOM 3 OP1 G A 9 244.651 -1.373 250.733 1.00 52.76 O
ATOM 4 OP2 G A 9 245.382 0.784 251.877 1.00 52.56 O
ATOM 5 O5' G A 9 247.056 -0.949 251.248 1.00 53.58 O
ATOM 6 C5' G A 9 247.387 -1.276 252.581 1.00 54.05 C
ATOM 7 C4' G A 9 248.774 -1.819 252.674 1.00 54.77 C
ATOM 8 O4' G A 9 248.916 -2.932 251.766 1.00 55.00 O
ATOM 9 C3' G A 9 249.879 -0.875 252.281 1.00 54.85 C
ATOM 10 O3' G A 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 11 C2' G A 9 250.976 -1.838 251.881 1.00 55.53 C
ATOM 12 O2' G A 9 251.557 -2.406 253.035 1.00 56.17 O
ATOM 13 C1' G A 9 250.191 -2.933 251.210 1.00 55.42 C
ATOM 14 N9 G A 9 250.060 -2.752 249.766 1.00 55.08 N
ATOM 15 C8 G A 9 248.866 -2.698 249.113 1.00 54.49 C
ATOM 16 N7 G A 9 248.988 -2.607 247.829 1.00 54.35 N
ATOM 17 C5 G A 9 250.365 -2.636 247.616 1.00 54.89 C
ATOM 18 C6 G A 9 251.133 -2.572 246.412 1.00 55.07 C
ATOM 19 O6 G A 9 250.741 -2.463 245.243 1.00 54.78 O
ATOM 20 N1 G A 9 252.497 -2.629 246.674 1.00 55.70 N
ATOM 21 C2 G A 9 253.019 -2.732 247.935 1.00 56.10 C
ATOM 22 N2 G A 9 254.352 -2.763 248.039 1.00 56.73 N
ATOM 23 N3 G A 9 252.319 -2.818 249.044 1.00 55.96 N
ATOM 24 C4 G A 9 251.020 -2.751 248.813 1.00 55.34 C
ATOM 25 P A A 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 26 OP1 A A 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 27 OP2 A A 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 28 O5' A A 10 251.667 1.683 252.202 1.00 55.59 O
TER
ATOM 1 O3' C B1626 240.300 -6.117 247.506 1.00 56.35 O
ATOM 2 P A B1627 240.738 -4.952 248.495 1.00 53.64 P
ATOM 3 OP1 A B1627 239.805 -4.989 249.654 1.00 53.85 O
ATOM 4 OP2 A B1627 240.834 -3.700 247.685 1.00 53.58 O
ATOM 5 O5' A B1627 242.188 -5.430 248.947 1.00 53.64 O
ATOM 6 C5' A B1627 242.356 -6.613 249.710 1.00 53.69 C
ATOM 7 C4' A B1627 243.732 -6.695 250.316 1.00 53.76 C
ATOM 8 O4' A B1627 244.710 -6.886 249.256 1.00 53.63 O
ATOM 9 C3' A B1627 244.177 -5.464 251.081 1.00 53.93 C
ATOM 10 O3' A B1627 245.030 -5.867 252.136 1.00 54.07 O
ATOM 11 C2' A B1627 244.982 -4.702 250.030 1.00 53.82 C
ATOM 12 O2' A B1627 245.926 -3.790 250.544 1.00 53.97 O
ATOM 13 C1' A B1627 245.650 -5.841 249.280 1.00 53.69 C
ATOM 14 N9 A B1627 246.005 -5.517 247.903 1.00 53.55 N
ATOM 15 C8 A B1627 245.218 -5.090 246.871 1.00 53.42 C
ATOM 16 N7 A B1627 245.898 -4.898 245.756 1.00 53.33 N
ATOM 17 C5 A B1627 247.192 -5.218 246.090 1.00 53.42 C
ATOM 18 C6 A B1627 248.384 -5.250 245.353 1.00 53.44 C
ATOM 19 N6 A B1627 248.495 -4.916 244.075 1.00 53.34 N
ATOM 20 N1 A B1627 249.492 -5.654 245.994 1.00 53.59 N
ATOM 21 C2 A B1627 249.386 -6.007 247.284 1.00 53.69 C
ATOM 22 N3 A B1627 248.339 -6.012 248.089 1.00 53.69 N
ATOM 23 C4 A B1627 247.264 -5.611 247.411 1.00 53.55 C
ATOM 24 P C B1628 244.480 -5.908 253.626 1.00 89.14 P
ATOM 25 OP1 C B1628 243.529 -4.806 253.768 1.00 89.24 O
ATOM 26 OP2 C B1628 245.653 -5.944 254.504 1.00 89.30 O
ATOM 27 O5' C B1628 243.717 -7.296 253.695 1.00 89.07 O
TER
Atoms:
OP1: (244.651,-1.373,250.733)
OP2: (245.382,0.784,251.877)
C3': (249.879,-0.875,252.281)
C1': (250.191,-2.933,251.210)
C5': (247.387,-1.276,252.581)
O6: (250.741,-2.463,245.243)
O4': (248.916,-2.932,251.766)
C8: (248.866,-2.698,249.113)
C2: (253.019,-2.732,247.935)
C6: (251.133,-2.572,246.412)
C5: (250.365,-2.636,247.616)
C4: (251.020,-2.751,248.813)
P: (245.653,-0.300,250.914)
C4': (248.774,-1.819,252.674)
C2': (250.976,-1.838,251.881)
O2': (251.557,-2.406,253.035)
N1: (252.497,-2.629,246.674)
N2: (254.352,-2.763,248.039)
N3: (252.319,-2.818,249.044)
N7: (248.988,-2.607,247.829)
N9: (250.060,-2.752,249.766)
O5': (247.056,-0.949,251.248)
O3': (250.253,-0.026,253.349)
OP2: (245.382,0.784,251.877)
C3': (249.879,-0.875,252.281)
C1': (250.191,-2.933,251.210)
C5': (247.387,-1.276,252.581)
O6: (250.741,-2.463,245.243)
O4': (248.916,-2.932,251.766)
C8: (248.866,-2.698,249.113)
C2: (253.019,-2.732,247.935)
C6: (251.133,-2.572,246.412)
C5: (250.365,-2.636,247.616)
C4: (251.020,-2.751,248.813)
P: (245.653,-0.300,250.914)
C4': (248.774,-1.819,252.674)
C2': (250.976,-1.838,251.881)
O2': (251.557,-2.406,253.035)
N1: (252.497,-2.629,246.674)
N2: (254.352,-2.763,248.039)
N3: (252.319,-2.818,249.044)
N7: (248.988,-2.607,247.829)
N9: (250.060,-2.752,249.766)
O5': (247.056,-0.949,251.248)
O3': (250.253,-0.026,253.349)
OP1: (239.805,-4.989,249.654)
OP2: (240.834,-3.700,247.685)
C3': (244.177,-5.464,251.081)
C1': (245.650,-5.841,249.280)
C5': (242.356,-6.613,249.710)
O4': (244.710,-6.886,249.256)
C8: (245.218,-5.090,246.871)
O2': (245.926,-3.790,250.544)
C6: (248.384,-5.250,245.353)
C5: (247.192,-5.218,246.090)
C4: (247.264,-5.611,247.411)
P: (240.738,-4.952,248.495)
C4': (243.732,-6.695,250.316)
C2': (244.982,-4.702,250.030)
C2: (249.386,-6.007,247.284)
N1: (249.492,-5.654,245.994)
N3: (248.339,-6.012,248.089)
N6: (248.495,-4.916,244.075)
N7: (245.898,-4.898,245.756)
N9: (246.005,-5.517,247.903)
O5': (242.188,-5.430,248.947)
O3': (245.030,-5.867,252.136)
OP2: (240.834,-3.700,247.685)
C3': (244.177,-5.464,251.081)
C1': (245.650,-5.841,249.280)
C5': (242.356,-6.613,249.710)
O4': (244.710,-6.886,249.256)
C8: (245.218,-5.090,246.871)
O2': (245.926,-3.790,250.544)
C6: (248.384,-5.250,245.353)
C5: (247.192,-5.218,246.090)
C4: (247.264,-5.611,247.411)
P: (240.738,-4.952,248.495)
C4': (243.732,-6.695,250.316)
C2': (244.982,-4.702,250.030)
C2: (249.386,-6.007,247.284)
N1: (249.492,-5.654,245.994)
N3: (248.339,-6.012,248.089)
N6: (248.495,-4.916,244.075)
N7: (245.898,-4.898,245.756)
N9: (246.005,-5.517,247.903)
O5': (242.188,-5.430,248.947)
O3': (245.030,-5.867,252.136)
Image (generated by PyMOL):