Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A10:A1373
Extra
PDB:
ATOM 1 O3' U A 9 -45.324 89.998 76.155 1.00 27.78 O
ATOM 2 P G A 10 -46.871 89.708 76.419 1.00 57.65 P
ATOM 3 OP1 G A 10 -47.487 90.944 76.959 1.00 49.50 O
ATOM 4 OP2 G A 10 -46.972 88.454 77.200 1.00 45.91 O
ATOM 5 O5' G A 10 -47.465 89.440 74.962 1.00 17.53 O
ATOM 6 C5' G A 10 -48.829 88.953 74.807 1.00 16.28 C
ATOM 7 C4' G A 10 -49.220 88.892 73.349 1.00 16.89 C
ATOM 8 O4' G A 10 -49.426 90.225 72.825 1.00 17.01 O
ATOM 9 C3' G A 10 -48.209 88.242 72.427 1.00 18.32 C
ATOM 10 O3' G A 10 -48.410 86.837 72.435 1.00 19.20 O
ATOM 11 C2' G A 10 -48.528 88.881 71.076 1.00 17.77 C
ATOM 12 O2' G A 10 -49.624 88.280 70.426 1.00 19.14 O
ATOM 13 C1' G A 10 -48.962 90.290 71.485 1.00 16.60 C
ATOM 14 N9 G A 10 -47.877 91.262 71.447 1.00 23.01 N
ATOM 15 C8 G A 10 -47.437 92.033 72.496 1.00 20.47 C
ATOM 16 N7 G A 10 -46.429 92.798 72.185 1.00 19.87 N
ATOM 17 C5 G A 10 -46.192 92.524 70.851 1.00 19.01 C
ATOM 18 C6 G A 10 -45.213 93.047 69.980 1.00 20.51 C
ATOM 19 O6 G A 10 -44.337 93.890 70.216 1.00 24.45 O
ATOM 20 N1 G A 10 -45.316 92.488 68.716 1.00 21.58 N
ATOM 21 C2 G A 10 -46.254 91.548 68.339 1.00 23.53 C
ATOM 22 N2 G A 10 -46.189 91.134 67.068 1.00 22.10 N
ATOM 23 N3 G A 10 -47.179 91.055 69.147 1.00 23.33 N
ATOM 24 C4 G A 10 -47.087 91.581 70.378 1.00 22.51 C
ATOM 25 P A A 11 -47.170 85.862 72.703 1.00 35.98 P
ATOM 26 OP1 A A 11 -47.750 84.525 72.966 1.00 46.47 O
ATOM 27 OP2 A A 11 -46.292 86.483 73.721 1.00 47.94 O
ATOM 28 O5' A A 11 -46.388 85.858 71.312 1.00 5.92 O
TER
ATOM 1 O3' C B1372 -48.466 97.482 80.197 1.00 6.16 O
ATOM 2 P A B1373 -48.666 95.882 80.194 1.00 13.34 P
ATOM 3 OP1 A B1373 -49.716 95.535 81.207 1.00 26.00 O
ATOM 4 OP2 A B1373 -47.326 95.225 80.252 1.00 28.83 O
ATOM 5 O5' A B1373 -49.289 95.583 78.764 1.00 18.84 O
ATOM 6 C5' A B1373 -50.552 96.130 78.387 1.00 21.11 C
ATOM 7 C4' A B1373 -50.982 95.562 77.056 1.00 21.73 C
ATOM 8 O4' A B1373 -50.206 96.148 75.970 1.00 20.78 O
ATOM 9 C3' A B1373 -50.886 94.051 76.908 1.00 23.30 C
ATOM 10 O3' A B1373 -52.053 93.584 76.247 1.00 27.33 O
ATOM 11 C2' A B1373 -49.662 93.867 76.014 1.00 21.61 C
ATOM 12 O2' A B1373 -49.783 92.751 75.172 1.00 24.47 O
ATOM 13 C1' A B1373 -49.680 95.130 75.154 1.00 19.28 C
ATOM 14 N9 A B1373 -48.343 95.541 74.741 1.00 19.15 N
ATOM 15 C8 A B1373 -47.251 95.663 75.555 1.00 20.26 C
ATOM 16 N7 A B1373 -46.156 96.019 74.926 1.00 17.02 N
ATOM 17 C5 A B1373 -46.555 96.149 73.606 1.00 15.74 C
ATOM 18 C6 A B1373 -45.848 96.493 72.434 1.00 17.26 C
ATOM 19 N6 A B1373 -44.534 96.731 72.405 1.00 19.25 N
ATOM 20 N1 A B1373 -46.543 96.565 71.279 1.00 17.56 N
ATOM 21 C2 A B1373 -47.848 96.276 71.305 1.00 17.40 C
ATOM 22 N3 A B1373 -48.620 95.913 72.342 1.00 18.36 N
ATOM 23 C4 A B1373 -47.905 95.870 73.478 1.00 17.27 C
ATOM 24 P C B1374 -52.893 92.363 76.869 1.00 30.32 P
ATOM 25 OP1 C B1374 -52.008 91.644 77.827 1.00 83.32 O
ATOM 26 OP2 C B1374 -53.513 91.622 75.735 1.00 83.77 O
ATOM 27 O5' C B1374 -54.067 93.057 77.692 1.00 64.74 O
TER
ATOM 2 P G A 10 -46.871 89.708 76.419 1.00 57.65 P
ATOM 3 OP1 G A 10 -47.487 90.944 76.959 1.00 49.50 O
ATOM 4 OP2 G A 10 -46.972 88.454 77.200 1.00 45.91 O
ATOM 5 O5' G A 10 -47.465 89.440 74.962 1.00 17.53 O
ATOM 6 C5' G A 10 -48.829 88.953 74.807 1.00 16.28 C
ATOM 7 C4' G A 10 -49.220 88.892 73.349 1.00 16.89 C
ATOM 8 O4' G A 10 -49.426 90.225 72.825 1.00 17.01 O
ATOM 9 C3' G A 10 -48.209 88.242 72.427 1.00 18.32 C
ATOM 10 O3' G A 10 -48.410 86.837 72.435 1.00 19.20 O
ATOM 11 C2' G A 10 -48.528 88.881 71.076 1.00 17.77 C
ATOM 12 O2' G A 10 -49.624 88.280 70.426 1.00 19.14 O
ATOM 13 C1' G A 10 -48.962 90.290 71.485 1.00 16.60 C
ATOM 14 N9 G A 10 -47.877 91.262 71.447 1.00 23.01 N
ATOM 15 C8 G A 10 -47.437 92.033 72.496 1.00 20.47 C
ATOM 16 N7 G A 10 -46.429 92.798 72.185 1.00 19.87 N
ATOM 17 C5 G A 10 -46.192 92.524 70.851 1.00 19.01 C
ATOM 18 C6 G A 10 -45.213 93.047 69.980 1.00 20.51 C
ATOM 19 O6 G A 10 -44.337 93.890 70.216 1.00 24.45 O
ATOM 20 N1 G A 10 -45.316 92.488 68.716 1.00 21.58 N
ATOM 21 C2 G A 10 -46.254 91.548 68.339 1.00 23.53 C
ATOM 22 N2 G A 10 -46.189 91.134 67.068 1.00 22.10 N
ATOM 23 N3 G A 10 -47.179 91.055 69.147 1.00 23.33 N
ATOM 24 C4 G A 10 -47.087 91.581 70.378 1.00 22.51 C
ATOM 25 P A A 11 -47.170 85.862 72.703 1.00 35.98 P
ATOM 26 OP1 A A 11 -47.750 84.525 72.966 1.00 46.47 O
ATOM 27 OP2 A A 11 -46.292 86.483 73.721 1.00 47.94 O
ATOM 28 O5' A A 11 -46.388 85.858 71.312 1.00 5.92 O
TER
ATOM 1 O3' C B1372 -48.466 97.482 80.197 1.00 6.16 O
ATOM 2 P A B1373 -48.666 95.882 80.194 1.00 13.34 P
ATOM 3 OP1 A B1373 -49.716 95.535 81.207 1.00 26.00 O
ATOM 4 OP2 A B1373 -47.326 95.225 80.252 1.00 28.83 O
ATOM 5 O5' A B1373 -49.289 95.583 78.764 1.00 18.84 O
ATOM 6 C5' A B1373 -50.552 96.130 78.387 1.00 21.11 C
ATOM 7 C4' A B1373 -50.982 95.562 77.056 1.00 21.73 C
ATOM 8 O4' A B1373 -50.206 96.148 75.970 1.00 20.78 O
ATOM 9 C3' A B1373 -50.886 94.051 76.908 1.00 23.30 C
ATOM 10 O3' A B1373 -52.053 93.584 76.247 1.00 27.33 O
ATOM 11 C2' A B1373 -49.662 93.867 76.014 1.00 21.61 C
ATOM 12 O2' A B1373 -49.783 92.751 75.172 1.00 24.47 O
ATOM 13 C1' A B1373 -49.680 95.130 75.154 1.00 19.28 C
ATOM 14 N9 A B1373 -48.343 95.541 74.741 1.00 19.15 N
ATOM 15 C8 A B1373 -47.251 95.663 75.555 1.00 20.26 C
ATOM 16 N7 A B1373 -46.156 96.019 74.926 1.00 17.02 N
ATOM 17 C5 A B1373 -46.555 96.149 73.606 1.00 15.74 C
ATOM 18 C6 A B1373 -45.848 96.493 72.434 1.00 17.26 C
ATOM 19 N6 A B1373 -44.534 96.731 72.405 1.00 19.25 N
ATOM 20 N1 A B1373 -46.543 96.565 71.279 1.00 17.56 N
ATOM 21 C2 A B1373 -47.848 96.276 71.305 1.00 17.40 C
ATOM 22 N3 A B1373 -48.620 95.913 72.342 1.00 18.36 N
ATOM 23 C4 A B1373 -47.905 95.870 73.478 1.00 17.27 C
ATOM 24 P C B1374 -52.893 92.363 76.869 1.00 30.32 P
ATOM 25 OP1 C B1374 -52.008 91.644 77.827 1.00 83.32 O
ATOM 26 OP2 C B1374 -53.513 91.622 75.735 1.00 83.77 O
ATOM 27 O5' C B1374 -54.067 93.057 77.692 1.00 64.74 O
TER
Atoms:
OP1: (-47.487,90.944,76.959)
OP2: (-46.972,88.454,77.200)
C3': (-48.209,88.242,72.427)
C1': (-48.962,90.290,71.485)
C5': (-48.829,88.953,74.807)
O6: (-44.337,93.890,70.216)
O4': (-49.426,90.225,72.825)
C8: (-47.437,92.033,72.496)
C2: (-46.254,91.548,68.339)
C6: (-45.213,93.047,69.980)
C5: (-46.192,92.524,70.851)
C4: (-47.087,91.581,70.378)
P: (-46.871,89.708,76.419)
C4': (-49.220,88.892,73.349)
C2': (-48.528,88.881,71.076)
O2': (-49.624,88.280,70.426)
N1: (-45.316,92.488,68.716)
N2: (-46.189,91.134,67.068)
N3: (-47.179,91.055,69.147)
N7: (-46.429,92.798,72.185)
N9: (-47.877,91.262,71.447)
O5': (-47.465,89.440,74.962)
O3': (-48.410,86.837,72.435)
OP2: (-46.972,88.454,77.200)
C3': (-48.209,88.242,72.427)
C1': (-48.962,90.290,71.485)
C5': (-48.829,88.953,74.807)
O6: (-44.337,93.890,70.216)
O4': (-49.426,90.225,72.825)
C8: (-47.437,92.033,72.496)
C2: (-46.254,91.548,68.339)
C6: (-45.213,93.047,69.980)
C5: (-46.192,92.524,70.851)
C4: (-47.087,91.581,70.378)
P: (-46.871,89.708,76.419)
C4': (-49.220,88.892,73.349)
C2': (-48.528,88.881,71.076)
O2': (-49.624,88.280,70.426)
N1: (-45.316,92.488,68.716)
N2: (-46.189,91.134,67.068)
N3: (-47.179,91.055,69.147)
N7: (-46.429,92.798,72.185)
N9: (-47.877,91.262,71.447)
O5': (-47.465,89.440,74.962)
O3': (-48.410,86.837,72.435)
OP1: (-49.716,95.535,81.207)
OP2: (-47.326,95.225,80.252)
C3': (-50.886,94.051,76.908)
C1': (-49.680,95.130,75.154)
C5': (-50.552,96.130,78.387)
O4': (-50.206,96.148,75.970)
C8: (-47.251,95.663,75.555)
O2': (-49.783,92.751,75.172)
C6: (-45.848,96.493,72.434)
C5: (-46.555,96.149,73.606)
C4: (-47.905,95.870,73.478)
P: (-48.666,95.882,80.194)
C4': (-50.982,95.562,77.056)
C2': (-49.662,93.867,76.014)
C2: (-47.848,96.276,71.305)
N1: (-46.543,96.565,71.279)
N3: (-48.620,95.913,72.342)
N6: (-44.534,96.731,72.405)
N7: (-46.156,96.019,74.926)
N9: (-48.343,95.541,74.741)
O5': (-49.289,95.583,78.764)
O3': (-52.053,93.584,76.247)
OP2: (-47.326,95.225,80.252)
C3': (-50.886,94.051,76.908)
C1': (-49.680,95.130,75.154)
C5': (-50.552,96.130,78.387)
O4': (-50.206,96.148,75.970)
C8: (-47.251,95.663,75.555)
O2': (-49.783,92.751,75.172)
C6: (-45.848,96.493,72.434)
C5: (-46.555,96.149,73.606)
C4: (-47.905,95.870,73.478)
P: (-48.666,95.882,80.194)
C4': (-50.982,95.562,77.056)
C2': (-49.662,93.867,76.014)
C2: (-47.848,96.276,71.305)
N1: (-46.543,96.565,71.279)
N3: (-48.620,95.913,72.342)
N6: (-44.534,96.731,72.405)
N7: (-46.156,96.019,74.926)
N9: (-48.343,95.541,74.741)
O5': (-49.289,95.583,78.764)
O3': (-52.053,93.584,76.247)
Image (generated by PyMOL):